RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C MSN2P33748 704 aa7.02□□□□□ -1.28
AFG2YLR397C PIN4P34217 668 aaKnown RBP RIP-Chip data7.02□□□□□ -1.28not detected
AFG2YLR397C EHT1P38295 451 aa7.02□□□□□ -1.28
AFG2YLR397C SCW11P53189 542 aa7.02□□□□□ -1.28
AFG2YLR397C SWC4P53201 476 aa7.02□□□□□ -1.28
AFG2YLR397C DCR2Q05924 578 aa7.02□□□□□ -1.28
AFG2YLR397C RRP40Q08285 240 aaKnown RBP7.02□□□□□ -1.28
AFG2YLR397C ADH2P00331 348 aaKnown RBP7.02□□□□□ -1.29
AFG2YLR397C CAR1P00812 333 aaKnown RBP7.02□□□□□ -1.29
AFG2YLR397C WHI2P12611 486 aa7.02□□□□□ -1.29
AFG2YLR397C CKS1P20486 150 aaKnown RBP7.02□□□□□ -1.29
AFG2YLR397C TRX1P22217 103 aaKnown RBP7.02□□□□□ -1.29
AFG2YLR397C DBR1P24309 405 aaKnown RBP7.02□□□□□ -1.29
AFG2YLR397C FAA1P30624 700 aaKnown RBP7.02□□□□□ -1.29
AFG2YLR397C MCM10P32354 571 aa7.02□□□□□ -1.29
AFG2YLR397C NRP1P32770 719 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
AFG2YLR397C ABD1P32783 436 aaPredicted RBP7.02□□□□□ -1.29
AFG2YLR397C GSP1P32835 219 aaKnown RBP7.02□□□□□ -1.29
AFG2YLR397C GSP2P32836 220 aaKnown RBP7.02□□□□□ -1.29
AFG2YLR397C SRB2P34162 210 aa7.02□□□□□ -1.29
AFG2YLR397C BIT2P38346 545 aa7.02□□□□□ -1.29
AFG2YLR397C XDJ1P39102 459 aa7.02□□□□□ -1.29
AFG2YLR397C HAT2P39984 401 aa7.02□□□□□ -1.29
AFG2YLR397C ATM1P40416 690 aa7.02□□□□□ -1.29
AFG2YLR397C PMT4P46971 762 aa7.02□□□□□ -1.29
AFG2YLR397C ASG7P46993 209 aa7.02□□□□□ -1.29
AFG2YLR397C BNA1P47096 177 aa7.02□□□□□ -1.29
AFG2YLR397C RPA49Q01080 415 aaPredicted RBP7.02□□□□□ -1.29
AFG2YLR397C KAR5Q04746 504 aa7.02□□□□□ -1.29
AFG2YLR397C YLR326WQ06170 240 aaKnown RBP7.02□□□□□ -1.29
AFG2YLR397C PHO92Q06390 306 aa7.02□□□□□ -1.29
AFG2YLR397C SSK1Q07084 712 aa7.02□□□□□ -1.29
AFG2YLR397C YPL066WQ12194 479 aa7.02□□□□□ -1.29
AFG2YLR397C YPR145C-AQ2V2P0 78 aa7.02□□□□□ -1.29
AFG2YLR397C MPD2Q99316 277 aa7.02□□□□□ -1.29
AFG2YLR397C RPL9AP05738 191 aaKnown RBP7.01□□□□□ -1.29
AFG2YLR397C CTT1P06115 562 aa7.01□□□□□ -1.29
AFG2YLR397C MSS18P08593 268 aa7.01□□□□□ -1.29
AFG2YLR397C ERR1P0CX10 437 aa7.01□□□□□ -1.29
AFG2YLR397C ERR2P0CX11 437 aa7.01□□□□□ -1.29
AFG2YLR397C GAP1P19145 602 aaPredicted RBP7.01□□□□□ -1.29
AFG2YLR397C AHC2P25649 128 aa7.01□□□□□ -1.29
AFG2YLR397C LAC1P28496 418 aa7.01□□□□□ -1.29
AFG2YLR397C PRE3P38624 215 aa7.01□□□□□ -1.29
AFG2YLR397C RRP3P38712 501 aaKnown RBP7.01□□□□□ -1.29
AFG2YLR397C HXT8P40886 569 aa7.01□□□□□ -1.29
AFG2YLR397C ERR3P42222 437 aa7.01□□□□□ -1.29
AFG2YLR397C RPL9BP51401 191 aaKnown RBP7.01□□□□□ -1.29
AFG2YLR397C NAM8Q00539 523 aaKnown RBP7.01□□□□□ -1.29
AFG2YLR397C SPR6Q01684 191 aa7.01□□□□□ -1.29
AFG2YLR397C STD1Q02794 444 aa7.01□□□□□ -1.29
AFG2YLR397C YDC1Q02896 317 aa7.01□□□□□ -1.29
AFG2YLR397C SMA2Q04658 369 aa7.01□□□□□ -1.29
AFG2YLR397C YLR108CQ12259 485 aa7.01□□□□□ -1.29
AFG2YLR397C GPM3Q12326 303 aa7.01□□□□□ -1.29
AFG2YLR397C RPL8AP17076 256 aaKnown RBP7.01□□□□□ -1.29
AFG2YLR397C YCL049CP25577 312 aa7.01□□□□□ -1.29
AFG2YLR397C NOP4P37838 685 aaKnown RBP7.01□□□□□ -1.29
AFG2YLR397C APM2P38700 605 aa7.01□□□□□ -1.29
AFG2YLR397C MNL1P38888 796 aa7.01□□□□□ -1.29
AFG2YLR397C UIP3P39547 235 aa7.01□□□□□ -1.29
AFG2YLR397C GIM4P40005 111 aaKnown RBP7.01□□□□□ -1.29
AFG2YLR397C PCL6P40038 420 aa7.01□□□□□ -1.29
AFG2YLR397C YML6P51998 286 aa7.01□□□□□ -1.29
AFG2YLR397C PKP2P53170 491 aa7.01□□□□□ -1.29
AFG2YLR397C VOA1P53262 265 aa7.01□□□□□ -1.29
AFG2YLR397C SHY1P53266 389 aa7.01□□□□□ -1.29
AFG2YLR397C RPT4P53549 437 aaKnown RBP7.01□□□□□ -1.29
AFG2YLR397C PRM15Q03262 622 aa7.01□□□□□ -1.29
AFG2YLR397C GAS2Q06135 555 aa7.01□□□□□ -1.29
AFG2YLR397C NBA1Q08229 501 aaKnown RBP7.01□□□□□ -1.29
AFG2YLR397C Q0142Q9ZZW4 58 aa7.01□□□□□ -1.29
AFG2YLR397C PUT4P15380 627 aa7□□□□□ -1.29
AFG2YLR397C RPB3P16370 318 aaKnown RBP7□□□□□ -1.29
AFG2YLR397C ATG15P25641 520 aa7□□□□□ -1.29
AFG2YLR397C SNC1P31109 117 aa7□□□□□ -1.29
AFG2YLR397C SHE3P38272 425 aaKnown RBP7□□□□□ -1.29
AFG2YLR397C PRS3P38689 320 aaKnown RBP7□□□□□ -1.29
AFG2YLR397C SOP4P39543 234 aaPredicted RBP7□□□□□ -1.29
AFG2YLR397C CFD1P40558 293 aa7□□□□□ -1.29
AFG2YLR397C NBP35P52920 328 aa7□□□□□ -1.29
AFG2YLR397C HSP31Q04432 237 aa7□□□□□ -1.29
AFG2YLR397C SEC13Q04491 297 aaKnown RBP7□□□□□ -1.29
AFG2YLR397C AIM32Q04689 311 aa7□□□□□ -1.29
AFG2YLR397C YDL057WQ07379 328 aa7□□□□□ -1.29
AFG2YLR397C YLR126CQ12288 251 aa7□□□□□ -1.29
AFG2YLR397C RGT2Q12300 763 aa7□□□□□ -1.29
AFG2YLR397C EAF3Q12432 401 aa7□□□□□ -1.29
AFG2YLR397C PCD1Q12524 340 aa7□□□□□ -1.29
AFG2YLR397C SSA3P09435 649 aaKnown RBP7□□□□□ -1.29
AFG2YLR397C ASP3-2P0CX77 362 aa7□□□□□ -1.29
AFG2YLR397C ASP3-3P0CX78 362 aa7□□□□□ -1.29
AFG2YLR397C ASP3-4P0CX79 362 aa7□□□□□ -1.29
AFG2YLR397C ASP3-1P0CZ17 362 aa7□□□□□ -1.29
AFG2YLR397C FUN14P18411 198 aa7□□□□□ -1.29
AFG2YLR397C URA7P28274 579 aaKnown RBP7□□□□□ -1.29
AFG2YLR397C MOT2P34909 587 aaKnown RBP7□□□□□ -1.29
AFG2YLR397C YFL012WP43580 148 aa7□□□□□ -1.29
AFG2YLR397C YGR250CP53316 781 aaKnown RBP7□□□□□ -1.29
AFG2YLR397C YNR065CP53751 1116 aa7□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 70.5 ms