RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	GIC1	P38785	314 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	YHR122W	P38829	231 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	LYS9	P38999	446 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	PSD1	P39006	500 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	CCT2	P39076	527 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	RMD6	P39975	231 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	GDS1	P41913	522 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	PMT6	P42934	759 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	ALR2	P43553	858 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	LSB3	P43603	459 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	YJL163C	P46996	555 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	DIE2	P50076	525 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	YGL185C	P53100	379 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	YGL159W	P53110	370 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	YGR026W	P53217	278 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	YPL034W	Q03083	165 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	GIS1	Q03833	894 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	DLT1	Q04216	342 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	RRD2	Q12461	358 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	AFI1	Q99222	893 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	MTF2	P10849	440 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	INO1	P11986	533 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	YCP4	P25349	247 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	YCL068C	P25593	260 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	SPS19	P32573	292 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	GEX2	P36173	615 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	YBR184W	P38299	523 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	YBR220C	P38318	560 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	SHG1	P38337	142 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	SEC72	P39742	193 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	SER33	P40510	469 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	YGR201C	P42936	225 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	AIM22	P47051	409 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	LYS20	P48570	428 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	NQM1	P53228	333 aa	Predicted RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	ZPR1	P53303	486 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	MTD1	Q02046	320 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	MRPL1	Q04599	285 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	CSM3	Q04659	317 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	SPO75	Q07798	868 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	DCS2	Q12123	353 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	YOL114C	Q12322	202 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	FMP16	Q12497	93 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	CDC7	P06243	507 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	HIS5	P07172	385 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	CDC34	P14682	295 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	ERD2	P18414	219 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	SLY1	P22213	666 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	RFA1	P22336	621 aa	Known RBP	3.29	□□□□□ -1.88
PEX1	YKL197C	RBK1	P25332	333 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	STB6	P36085	766 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	SPC34	P36131	295 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	VBA5	P36172	582 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	REG2	P38232	338 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	ICS2	P38284	255 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	YHR112C	P38716	378 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	SFB3	P38810	929 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	MNN9	P39107	395 aa	Known RBP	3.29	□□□□□ -1.88
PEX1	YKL197C	BDH1	P39714	382 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	MAM33	P40513	266 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	SNG1	P46950	547 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	HOC1	P47124	396 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	AAD10	P47182	288 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	MTG1	Q03151	367 aa	Predicted RBP	3.29	□□□□□ -1.88
PEX1	YKL197C	CCE1	Q03702	353 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	RTT109	Q07794	436 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	HRD1	Q08109	551 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	SWT1	Q12104	458 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	UBX3	Q12229	455 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.29	□□□□□ -1.88	not detected
PEX1	YKL197C	MSF1	P08425	469 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	SNF6	P18888	332 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	YCR051W	P25631	222 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.29	□□□□□ -1.88	not detected
PEX1	YKL197C	UGX2	P32772	223 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	PTK1	P36002	662 aa	Predicted RBP	3.29	□□□□□ -1.88
PEX1	YKL197C	TCD2	P36101	447 aa	Known RBP	3.29	□□□□□ -1.88
PEX1	YKL197C	PUG1	P40100	303 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	GTT1	P40582	234 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	OPT1	P40897	799 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	OYE3	P41816	400 aa	Predicted RBP	3.29	□□□□□ -1.88
PEX1	YKL197C	SWP82	P43554	623 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	YJL132W	P47014	750 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	COS5	P47187	383 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	TAF6	P53040	516 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	MAL13	P53338	473 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	COS1	P53822	381 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	YNL184C	P53876	108 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	PEX13	P80667	386 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	RPA49	Q01080	415 aa	Predicted RBP	3.29	□□□□□ -1.88
PEX1	YKL197C	DIG1	Q03063	452 aa	Known RBP	3.29	□□□□□ -1.88
PEX1	YKL197C	ATC1	Q04005	294 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	YDL086W	Q07505	273 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	YOL107W	Q12239	342 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	PET20	Q99373	253 aa		3.29	□□□□□ -1.88
PEX1	YKL197C	YOR304C-A	O14468	76 aa		3.28	□□□□□ -1.88
PEX1	YKL197C	LPD1	P09624	499 aa	Known RBP	3.28	□□□□□ -1.88
PEX1	YKL197C	TUB3	P09734	445 aa	Known RBP	3.28	□□□□□ -1.88
PEX1	YKL197C	SAR1	P20606	190 aa	Known RBP	3.28	□□□□□ -1.88
PEX1	YKL197C	AIM17	P23180	465 aa	Known RBP	3.28	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms