RNA–Protein interactions for RNA: YGR240C

PFK1, Transcript of Alpha subunit of heterooctameric phosphofructokinase, yeast

Gene PFK1, Length 2,964 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PFK1	YGR240C	SKG6	P32900	734 aa	Predicted RBP	4.22	□□□□□ -1.73
PFK1	YGR240C	MNN2	P38069	597 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	TDP1	P38319	544 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	STB5	P38699	743 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	GAA1	P39012	614 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	YJL206C	P39529	758 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	RRD1	P40454	393 aa	Known RBP	4.22	□□□□□ -1.73
PFK1	YGR240C	BUD8	P41698	603 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	PRM10	P42946	383 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	NBP35	P52920	328 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	SPC98	P53540	846 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	TRM112	P53738	135 aa	Predicted RBP	4.22	□□□□□ -1.73
PFK1	YGR240C	YML037C	Q03703	340 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	RIM13	Q03792	727 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	YMR130W	Q04223	302 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	DIA2	Q08496	732 aa	Predicted RBP	4.22	□□□□□ -1.73
PFK1	YGR240C	PUS7	Q08647	676 aa	Known RBP	4.22	□□□□□ -1.73
PFK1	YGR240C	EMP46	Q12396	444 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	YBR182C-A	Q8TGU6	64 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	Q0142	Q9ZZW4	58 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	COX2	P00410	251 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	COS2	P0CX12	379 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	COS3	P0CX13	379 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	PHO13	P19881	312 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	CNA1	P23287	553 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	KAR9	P32526	644 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	LIP5	P32875	414 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
PFK1	YGR240C	CLG1	P35190	452 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	RPF2	P36160	344 aa	Known RBP	4.22	□□□□□ -1.73
PFK1	YGR240C	ICS2	P38284	255 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	ALP1	P38971	573 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	UBP9	P39967	754 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	HPM1	P40481	377 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	IME4	P41833	600 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	MSE1	P48525	536 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	RFX1	P48743	811 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	NQM1	P53228	333 aa	Predicted RBP	4.22	□□□□□ -1.73
PFK1	YGR240C	BIO5	P53744	561 aa	Known RBP	4.22	□□□□□ -1.73
PFK1	YGR240C	YNL165W	P53891	406 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	REC102	Q02721	264 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	ELP4	Q02884	456 aa	Known RBP	4.22	□□□□□ -1.73
PFK1	YGR240C	HRK1	Q08732	759 aa	Known RBP	4.22	□□□□□ -1.73
PFK1	YGR240C	YOR223W	Q12015	292 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	THP3	Q12049	470 aa	Known RBP	4.22	□□□□□ -1.73
PFK1	YGR240C	ATP16	Q12165	160 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	YCL012C	Q8J0M4	134 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	Q0144	Q9ZZW2	109 aa		4.22	□□□□□ -1.73
PFK1	YGR240C	RPS17A	P02407	136 aa	Known RBP	4.21	□□□□□ -1.74
PFK1	YGR240C	CLN3	P13365	580 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	RPS17B	P14127	136 aa	Known RBP	4.21	□□□□□ -1.74
PFK1	YGR240C	HPR1	P17629	752 aa	Known RBP	4.21	□□□□□ -1.74
PFK1	YGR240C	SAM2	P19358	384 aa	Known RBP	4.21	□□□□□ -1.74
PFK1	YGR240C	CPR4	P25334	318 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	CSM1	P25651	190 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	RPC25	P35718	212 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	MCH2	P36032	473 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	MRPL7	P36519	292 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	FLR1	P38124	548 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	FZO1	P38297	855 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	RRP3	P38712	501 aa	Known RBP	4.21	□□□□□ -1.74
PFK1	YGR240C	SRP14	P38985	146 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	YIP5	P53108	310 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	GET1	P53192	235 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	YNL140C	P53910	189 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	MPS1	P54199	764 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	MFM1	Q02783	413 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	TMA16	Q08687	178 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	YOR022C	Q12204	715 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	RTR2	Q12378	196 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	QCR7	P00128	127 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	NHP6A	P11632	93 aa	Known RBP	4.21	□□□□□ -1.74
PFK1	YGR240C	HMG2	P12684	1045 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	KIN3	P22209	435 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	AIM17	P23180	465 aa	Known RBP	4.21	□□□□□ -1.74
PFK1	YGR240C	PET127	P32606	800 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	SKN7	P38889	622 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	ERG28	P40030	148 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	SYG1	P40528	902 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	AIM22	P47051	409 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	ALG11	P53954	548 aa	Known RBP	4.21	□□□□□ -1.74
PFK1	YGR240C	APM1	Q00776	475 aa	Predicted RBP	4.21	□□□□□ -1.74
PFK1	YGR240C	MFG1	Q07684	458 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	NSE1	Q07913	336 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	DIS3	Q08162	1001 aa	Known RBP	4.21	□□□□□ -1.74
PFK1	YGR240C	AAD15	Q08361	143 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	GEP3	Q08622	556 aa		4.21	□□□□□ -1.74
PFK1	YGR240C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
PFK1	YGR240C	DIF1	O13577	133 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	RPS16A	P0CX51	143 aa	Known RBP	4.2	□□□□□ -1.74
PFK1	YGR240C	RPS16B	P0CX52	143 aa	Known RBP	4.2	□□□□□ -1.74
PFK1	YGR240C	RPL4A	P10664	362 aa	Known RBP	4.2	□□□□□ -1.74
PFK1	YGR240C	PDC5	P16467	563 aa	Known RBP	4.2	□□□□□ -1.74
PFK1	YGR240C	SAC7	P17121	654 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	SPO11	P23179	398 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	YCL002C	P25565	263 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	EMP70	P32802	667 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	SPT23	P35210	1082 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	YKL077W	P36081	392 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	YHR210C	P38893	341 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms