RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W ARR1Q06596 294 aa6.19□□□□□ -1.42
SNU71YGR013W YOL107WQ12239 342 aa6.19□□□□□ -1.42
SNU71YGR013W SUC2P00724 532 aa6.18□□□□□ -1.42
SNU71YGR013W RSR1P13856 272 aa6.18□□□□□ -1.42
SNU71YGR013W CYS4P32582 507 aaKnown RBP6.18□□□□□ -1.42
SNU71YGR013W FRE1P32791 686 aa6.18□□□□□ -1.42
SNU71YGR013W REC114P32841 428 aa6.18□□□□□ -1.42
SNU71YGR013W PRP39P39682 629 aaKnown RBP6.18□□□□□ -1.42
SNU71YGR013W DSN1P40568 576 aa6.18□□□□□ -1.42
SNU71YGR013W TOS3P43637 560 aa6.18□□□□□ -1.42
SNU71YGR013W BNA3P47039 444 aaKnown RBP6.18□□□□□ -1.42
SNU71YGR013W UBP8P50102 471 aa6.18□□□□□ -1.42
SNU71YGR013W PKP2P53170 491 aa6.18□□□□□ -1.42
SNU71YGR013W ECM7Q06200 448 aa6.18□□□□□ -1.42
SNU71YGR013W PAA1Q12447 191 aaKnown RBP6.18□□□□□ -1.42
SNU71YGR013W YRF1-3P0CX14 1859 aa6.18□□□□□ -1.42
SNU71YGR013W YRF1-7P0CX15 1859 aa6.18□□□□□ -1.42
SNU71YGR013W YRF1-6P53819 1859 aa6.18□□□□□ -1.42
SNU71YGR013W RPS24AP0CX31 135 aaKnown RBP6.17□□□□□ -1.42
SNU71YGR013W RPS24BP0CX32 135 aaKnown RBP6.17□□□□□ -1.42
SNU71YGR013W RPB4P20433 221 aaPredicted RBP6.17□□□□□ -1.42
SNU71YGR013W RAD23P32628 398 aaKnown RBP6.17□□□□□ -1.42
SNU71YGR013W OCT1P35999 772 aa6.17□□□□□ -1.42
SNU71YGR013W MNT4P53745 580 aa6.17□□□□□ -1.42
SNU71YGR013W YIF1P53845 314 aaKnown RBP6.17□□□□□ -1.42
SNU71YGR013W APC4Q04601 652 aa6.17□□□□□ -1.42
SNU71YGR013W MRPL35Q06678 367 aa6.17□□□□□ -1.42
SNU71YGR013W MCH4Q08268 501 aa6.17□□□□□ -1.42
SNU71YGR013W AIM45Q12480 344 aaKnown RBP6.17□□□□□ -1.42
SNU71YGR013W FMP16Q12497 93 aa6.17□□□□□ -1.42
SNU71YGR013W BAR1P12630 587 aa6.17□□□□□ -1.42
SNU71YGR013W MER1P16523 270 aa6.17□□□□□ -1.42
SNU71YGR013W SAR1P20606 190 aaKnown RBP6.17□□□□□ -1.42
SNU71YGR013W HCM1P25364 564 aa6.17□□□□□ -1.42
SNU71YGR013W YUR1P26725 428 aa6.17□□□□□ -1.42
SNU71YGR013W MSS51P32335 436 aa6.17□□□□□ -1.42
SNU71YGR013W SMY1P32364 656 aaKnown RBP6.17□□□□□ -1.42
SNU71YGR013W RAD24P32641 659 aa6.17□□□□□ -1.42
SNU71YGR013W PAD1P33751 242 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
SNU71YGR013W INA22P40576 216 aa6.17□□□□□ -1.42
SNU71YGR013W HXT9P40885 567 aa6.17□□□□□ -1.42
SNU71YGR013W TRS85P46944 698 aa6.17□□□□□ -1.42
SNU71YGR013W YNL134CP53912 376 aaKnown RBP6.17□□□□□ -1.42
SNU71YGR013W MUK1Q02866 612 aa6.17□□□□□ -1.42
SNU71YGR013W GIP3Q03016 1276 aa6.17□□□□□ -1.42
SNU71YGR013W YMR206WQ03695 313 aa6.17□□□□□ -1.42
SNU71YGR013W GIS1Q03833 894 aa6.17□□□□□ -1.42
SNU71YGR013W URC2Q04411 772 aa6.17□□□□□ -1.42
SNU71YGR013W PIG1Q06216 648 aa6.17□□□□□ -1.42
SNU71YGR013W PRB1P09232 635 aa6.16□□□□□ -1.42
SNU71YGR013W AQY1P0CD91 305 aa6.16□□□□□ -1.42
SNU71YGR013W PPZ1P26570 692 aa6.16□□□□□ -1.42
SNU71YGR013W PRS1P32895 427 aaKnown RBP6.16□□□□□ -1.42
SNU71YGR013W PET100P38958 111 aa6.16□□□□□ -1.42
SNU71YGR013W AIM10P39965 576 aaKnown RBP6.16□□□□□ -1.42
SNU71YGR013W CDC40P40968 455 aaPredicted RBP6.16□□□□□ -1.42
SNU71YGR013W PMT5P52867 743 aa6.16□□□□□ -1.42
SNU71YGR013W YMR102CQ03177 834 aa6.16□□□□□ -1.42
SNU71YGR013W YDR387CQ04162 555 aa6.16□□□□□ -1.42
SNU71YGR013W LSP1Q12230 341 aaKnown RBP6.16□□□□□ -1.42
SNU71YGR013W YDR262WQ12331 272 aa6.16□□□□□ -1.42
SNU71YGR013W OPI3P05375 206 aa6.15□□□□□ -1.42
SNU71YGR013W MSS116P15424 664 aaKnown RBP6.15□□□□□ -1.42
SNU71YGR013W RPL5P26321 297 aaKnown RBP6.15□□□□□ -1.42
SNU71YGR013W ALD5P40047 520 aaKnown RBP6.15□□□□□ -1.42
SNU71YGR013W YER079WP40052 210 aaKnown RBP6.15□□□□□ -1.42
SNU71YGR013W SNL1P40548 159 aa6.15□□□□□ -1.42
SNU71YGR013W BIO3P50277 480 aa6.15□□□□□ -1.42
SNU71YGR013W ORC5P50874 479 aa6.15□□□□□ -1.42
SNU71YGR013W YPL014WQ02606 381 aa6.15□□□□□ -1.42
SNU71YGR013W ARG80P07249 177 aa6.15□□□□□ -1.43
SNU71YGR013W IMA3P0CW40 589 aa6.15□□□□□ -1.43
SNU71YGR013W IMA4P0CW41 589 aa6.15□□□□□ -1.43
SNU71YGR013W RPI1P23250 407 aaKnown RBP6.15□□□□□ -1.43
SNU71YGR013W RAD57P25301 460 aa6.15□□□□□ -1.43
SNU71YGR013W THI80P35202 319 aa6.15□□□□□ -1.43
SNU71YGR013W OMA1P36163 345 aa6.15□□□□□ -1.43
SNU71YGR013W YJL043WP47053 257 aa6.15□□□□□ -1.43
SNU71YGR013W TAF12Q03761 539 aa6.15□□□□□ -1.43
SNU71YGR013W NUP53Q03790 475 aa6.15□□□□□ -1.43
SNU71YGR013W BCP1Q06338 283 aa6.15□□□□□ -1.43
SNU71YGR013W IMA2Q08295 589 aa6.15□□□□□ -1.43
SNU71YGR013W AAD15Q08361 143 aa6.15□□□□□ -1.43
SNU71YGR013W SNF2P22082 1703 aa6.15□□□□□ -1.43
SNU71YGR013W HEM1P09950 548 aaPredicted RBP6.14□□□□□ -1.43
SNU71YGR013W DBR1P24309 405 aaKnown RBP6.14□□□□□ -1.43
SNU71YGR013W MSK1P32048 576 aa6.14□□□□□ -1.43
SNU71YGR013W SPR1P32603 445 aa6.14□□□□□ -1.43
SNU71YGR013W RTC2P38279 296 aa6.14□□□□□ -1.43
SNU71YGR013W LAG1P38703 411 aa6.14□□□□□ -1.43
SNU71YGR013W TIM21P53220 239 aa6.14□□□□□ -1.43
SNU71YGR013W GLE1Q12315 538 aa6.14□□□□□ -1.43
SNU71YGR013W RKM5Q12367 367 aa6.14□□□□□ -1.43
SNU71YGR013W GLT1Q12680 2145 aaKnown RBP6.14□□□□□ -1.43
SNU71YGR013W FKS3Q04952 1785 aa6.13□□□□□ -1.43
SNU71YGR013W RPL18AP0CX49 186 aaKnown RBP6.13□□□□□ -1.43
SNU71YGR013W RPL18BP0CX50 186 aaKnown RBP6.13□□□□□ -1.43
SNU71YGR013W RPL12AP0CX53 165 aaKnown RBP6.13□□□□□ -1.43
SNU71YGR013W RPL12BP0CX54 165 aa6.13□□□□□ -1.43
SNU71YGR013W VPS3P23643 1011 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms