RNA–Protein interactions for RNA: YDR137W

RGP1, Transcript of Subunit of a Golgi membrane exchange factor (Ric1p-Rgp1p), yeast

Gene RGP1, Length 1,992 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RGP1	YDR137W	REX4	Q08237	289 aa		4.26	□□□□□ -1.73
RGP1	YDR137W	CHD1	P32657	1468 aa		4.26	□□□□□ -1.73
RGP1	YDR137W	RPL18A	P0CX49	186 aa	Known RBP	4.25	□□□□□ -1.73
RGP1	YDR137W	RPL18B	P0CX50	186 aa	Known RBP	4.25	□□□□□ -1.73
RGP1	YDR137W	PRP16	P15938	1071 aa	Predicted RBP	4.25	□□□□□ -1.73
RGP1	YDR137W	SLM5	P25345	492 aa	Known RBP	4.25	□□□□□ -1.73
RGP1	YDR137W	KKQ8	P36004	724 aa		4.25	□□□□□ -1.73
RGP1	YDR137W	ISC1	P40015	477 aa	Known RBP	4.25	□□□□□ -1.73
RGP1	YDR137W	YPL068C	Q02749	293 aa		4.25	□□□□□ -1.73
RGP1	YDR137W	PNG1	Q02890	363 aa		4.25	□□□□□ -1.73
RGP1	YDR137W	GLE1	Q12315	538 aa		4.25	□□□□□ -1.73
RGP1	YDR137W	FMP16	Q12497	93 aa		4.25	□□□□□ -1.73
RGP1	YDR137W	YLL053C	P0CD98	152 aa		4.25	□□□□□ -1.73
RGP1	YDR137W	ARF1	P11076	181 aa	Known RBP	4.25	□□□□□ -1.73
RGP1	YDR137W	RSR1	P13856	272 aa		4.25	□□□□□ -1.73
RGP1	YDR137W	CKI1	P20485	582 aa		4.25	□□□□□ -1.73
RGP1	YDR137W	YKL097C	P34245	136 aa		4.25	□□□□□ -1.73
RGP1	YDR137W	RPC25	P35718	212 aa		4.25	□□□□□ -1.73
RGP1	YDR137W	LYS1	P38998	373 aa	RIP-Chip data	4.25	□□□□□ -1.73	not detected
RGP1	YDR137W	VRG4	P40107	337 aa		4.25	□□□□□ -1.73
RGP1	YDR137W	LYS12	P40495	371 aa	Known RBP	4.25	□□□□□ -1.73
RGP1	YDR137W	SAM50	P53969	484 aa		4.25	□□□□□ -1.73
RGP1	YDR137W	YLR173W	Q06247	608 aa		4.25	□□□□□ -1.73
RGP1	YDR137W	SGT1	Q08446	395 aa		4.25	□□□□□ -1.73
RGP1	YDR137W	SRL2	Q12020	392 aa		4.25	□□□□□ -1.73
RGP1	YDR137W	RBD2	Q12270	262 aa		4.25	□□□□□ -1.73
RGP1	YDR137W	SPO12	P17123	173 aa		4.24	□□□□□ -1.73
RGP1	YDR137W	RIM2	P38127	377 aa		4.24	□□□□□ -1.73
RGP1	YDR137W	MMF1	P40185	145 aa	Known RBP	4.24	□□□□□ -1.73
RGP1	YDR137W	VPS25	P47142	202 aa		4.24	□□□□□ -1.73
RGP1	YDR137W	BIO3	P50277	480 aa		4.24	□□□□□ -1.73
RGP1	YDR137W	RSN1	Q03516	953 aa		4.24	□□□□□ -1.73
RGP1	YDR137W	YMR034C	Q05131	434 aa	Predicted RBP	4.24	□□□□□ -1.73
RGP1	YDR137W	IRC10	Q08118	586 aa		4.24	□□□□□ -1.73
RGP1	YDR137W	YLR112W	Q12130	139 aa		4.24	□□□□□ -1.73
RGP1	YDR137W	SPO11	P23179	398 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	LSB5	P25369	354 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	ADY2	P25613	283 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	EFB1	P32471	206 aa	Known RBP	4.23	□□□□□ -1.73
RGP1	YDR137W	VAM7	P32912	316 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	ECT1	P33412	323 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	YPK3	P38070	525 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	RCY1	P39531	840 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	RTS2	P40962	232 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	ATP23	P53722	227 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	MNT4	P53745	580 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	FRE4	P53746	719 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	YNL260C	P53846	198 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	ASA1	Q06822	443 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	NRT1	Q08485	598 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	EXO70	P19658	623 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	SPS22	P25380	463 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	MXR2	P25566	168 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	CIN8	P27895	1000 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	HXT1	P32465	570 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	ZUO1	P32527	433 aa	Known RBP	4.23	□□□□□ -1.73
RGP1	YDR137W	ECM15	P35195	104 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	YKT6	P36015	200 aa	Known RBP	4.23	□□□□□ -1.73
RGP1	YDR137W	YCR041W	P37265	110 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	PEX32	P38292	413 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	GAT1	P43574	510 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	RRN9	P53437	365 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	YNR048W	P53740	393 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	MRP51	Q02950	344 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	RLI1	Q03195	608 aa	Known RBP	4.23	□□□□□ -1.73
RGP1	YDR137W	MSS11	Q03825	758 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	BCP1	Q06338	283 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	YOL075C	Q08234	1294 aa		4.23	□□□□□ -1.73
RGP1	YDR137W	DNL4	Q08387	944 aa	Predicted RBP	4.23	□□□□□ -1.73
RGP1	YDR137W	HEM2	P05373	342 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	GDH1	P07262	454 aa	Known RBP	4.22	□□□□□ -1.73
RGP1	YDR137W	CLN3	P13365	580 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	URE2	P23202	354 aa	Known RBP	4.22	□□□□□ -1.73
RGP1	YDR137W	FRE2	P36033	711 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	DOA1	P36037	715 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	FET3	P38993	636 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	SIM1	P40472	476 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	UTP25	P40498	721 aa	Known RBP	4.22	□□□□□ -1.73
RGP1	YDR137W	FMP33	P46998	180 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	PHB2	P50085	310 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	YNL050C	P53952	270 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	IDP3	P53982	420 aa	Known RBP	4.22	□□□□□ -1.73
RGP1	YDR137W	YMR102C	Q03177	834 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	BSC1	Q12140	328 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	MED4	Q12343	284 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	RRP12	Q12754	1228 aa	Known RBP	4.22	□□□□□ -1.73
RGP1	YDR137W	SAC3	P46674	1301 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	RPL24A	P04449	155 aa	Known RBP	4.22	□□□□□ -1.73
RGP1	YDR137W	RPB4	P20433	221 aa	Predicted RBP	4.22	□□□□□ -1.73
RGP1	YDR137W	PDR3	P33200	976 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	IML3	P38265	245 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	TAE1	P38340	232 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	SBE22	P38814	852 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	BTT1	P40314	149 aa	Predicted RBP	4.22	□□□□□ -1.73
RGP1	YDR137W	YNL234W	P53857	426 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	SRL4	Q03085	281 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	SMP3	Q04174	516 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	COQ11	Q05892	277 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	ADF1	Q2V2Q1	113 aa		4.22	□□□□□ -1.73
RGP1	YDR137W	DAL2	P25335	343 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms