RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C PSY3Q12318 242 aa12.59□□□□□ -0.39
SSA1YAL005C YIL046W-AQ3E7Z4 54 aa12.59□□□□□ -0.39
SSA1YAL005C CYR1P08678 2026 aaKnown RBP12.59□□□□□ -0.39
SSA1YAL005C MKK1P32490 508 aa12.58□□□□□ -0.39
SSA1YAL005C AUR1P36107 401 aaPredicted RBP12.58□□□□□ -0.39
SSA1YAL005C TSL1P38427 1098 aaKnown RBP12.58□□□□□ -0.39
SSA1YAL005C UME6P39001 836 aa12.58□□□□□ -0.39
SSA1YAL005C ASI2P53895 289 aa12.58□□□□□ -0.39
SSA1YAL005C YMR310CQ04867 317 aaPredicted RBP12.58□□□□□ -0.39
SSA1YAL005C ATG38Q05789 226 aaKnown RBP12.58□□□□□ -0.39
SSA1YAL005C ARR2Q06597 130 aa12.58□□□□□ -0.39
SSA1YAL005C SKS1Q12505 502 aa12.58□□□□□ -0.39
SSA1YAL005C DAL82P21705 255 aa12.58□□□□□ -0.4
SSA1YAL005C RPS27AP35997 82 aaKnown RBP12.58□□□□□ -0.4
SSA1YAL005C MRPL15P36523 253 aa12.58□□□□□ -0.4
SSA1YAL005C RPS27BP38711 82 aa12.58□□□□□ -0.4
SSA1YAL005C RBG1P39729 369 aa12.58□□□□□ -0.4
SSA1YAL005C FMP52P40008 231 aa12.58□□□□□ -0.4
SSA1YAL005C IES5P40060 125 aa12.58□□□□□ -0.4
SSA1YAL005C YIL152WP40455 235 aa12.58□□□□□ -0.4
SSA1YAL005C ERG13P54839 491 aaKnown RBP12.58□□□□□ -0.4
SSA1YAL005C MDM12Q92328 271 aa12.58□□□□□ -0.4
SSA1YAL005C IRA1P18963 3092 aa12.58□□□□□ -0.4
SSA1YAL005C TIM9O74700 87 aa12.57□□□□□ -0.4
SSA1YAL005C HTS1P07263 546 aaKnown RBP12.57□□□□□ -0.4
SSA1YAL005C MRPL32P25348 183 aa12.57□□□□□ -0.4
SSA1YAL005C NTG1P31378 399 aa12.57□□□□□ -0.4
SSA1YAL005C MTC2P34246 357 aa12.57□□□□□ -0.4
SSA1YAL005C RIB1P38066 345 aa12.57□□□□□ -0.4
SSA1YAL005C ATG14P38270 344 aa12.57□□□□□ -0.4
SSA1YAL005C RRF1P38771 230 aa12.57□□□□□ -0.4
SSA1YAL005C MRK1P50873 501 aa12.57□□□□□ -0.4
SSA1YAL005C RMR1P53060 241 aa12.57□□□□□ -0.4
SSA1YAL005C YGR266WP53326 701 aa12.57□□□□□ -0.4
SSA1YAL005C BSC1Q12140 328 aa12.57□□□□□ -0.4
SSA1YAL005C YOR019WQ99248 730 aa12.57□□□□□ -0.4
SSA1YAL005C TEC1P18412 486 aa12.56□□□□□ -0.4
SSA1YAL005C VHR1P40522 640 aa12.56□□□□□ -0.4
SSA1YAL005C MRPS18P42847 217 aa12.56□□□□□ -0.4
SSA1YAL005C UBC9P50623 157 aaPredicted RBP12.56□□□□□ -0.4
SSA1YAL005C YGR079WP53249 370 aa12.56□□□□□ -0.4
SSA1YAL005C YDL199CQ12407 687 aa12.56□□□□□ -0.4
SSA1YAL005C PTR2P32901 601 aa12.56□□□□□ -0.4
SSA1YAL005C MEU1Q07938 337 aaKnown RBP RIP-Chip data12.56□□□□□ -0.4not detected
SSA1YAL005C YOL073CQ08232 322 aa12.56□□□□□ -0.4
SSA1YAL005C YTM1Q12024 460 aaPredicted RBP12.56□□□□□ -0.4
SSA1YAL005C SEC39Q12745 709 aa12.56□□□□□ -0.4
SSA1YAL005C PUT2P07275 575 aa12.55□□□□□ -0.4
SSA1YAL005C RPS1BP23248 255 aaKnown RBP12.55□□□□□ -0.4
SSA1YAL005C BUD14P27637 709 aa12.55□□□□□ -0.4
SSA1YAL005C YLF2P38746 405 aa12.55□□□□□ -0.4
SSA1YAL005C MPM1P40364 252 aa12.55□□□□□ -0.4
SSA1YAL005C ELP2P42935 788 aa12.55□□□□□ -0.4
SSA1YAL005C TOM22P49334 152 aa12.55□□□□□ -0.4
SSA1YAL005C FAS1P07149 2051 aaKnown RBP12.55□□□□□ -0.4
SSA1YAL005C ZWF1P11412 505 aaKnown RBP12.54□□□□□ -0.4
SSA1YAL005C SNF4P12904 322 aa12.54□□□□□ -0.4
SSA1YAL005C YIM1P28625 365 aa12.54□□□□□ -0.4
SSA1YAL005C TUL1P36096 758 aa12.54□□□□□ -0.4
SSA1YAL005C YGR012WP53206 393 aa12.54□□□□□ -0.4
SSA1YAL005C YDR286CQ05530 114 aa12.54□□□□□ -0.4
SSA1YAL005C DCI1Q08558 271 aa12.54□□□□□ -0.4
SSA1YAL005C YOR342CQ12182 319 aa12.54□□□□□ -0.4
SSA1YAL005C YKL033W-AQ86ZR7 236 aa12.54□□□□□ -0.4
SSA1YAL005C CLB3P24870 427 aa12.54□□□□□ -0.4
SSA1YAL005C DMC1P25453 334 aa12.54□□□□□ -0.4
SSA1YAL005C SLM4P38247 162 aa12.54□□□□□ -0.4
SSA1YAL005C SRB7P47822 140 aa12.54□□□□□ -0.4
SSA1YAL005C YNL181WP53878 407 aa12.54□□□□□ -0.4
SSA1YAL005C SPO77Q06134 477 aa12.54□□□□□ -0.4
SSA1YAL005C RPB5P20434 215 aa12.53□□□□□ -0.4
SSA1YAL005C YJU2P28320 278 aaPredicted RBP12.53□□□□□ -0.4
SSA1YAL005C ZTA1P38230 334 aaKnown RBP12.53□□□□□ -0.4
SSA1YAL005C YHR210CP38893 341 aa12.53□□□□□ -0.4
SSA1YAL005C GIP2P40036 548 aa12.53□□□□□ -0.4
SSA1YAL005C AGP3P43548 558 aa12.53□□□□□ -0.4
SSA1YAL005C LAP3Q01532 483 aaKnown RBP RIP-Chip data12.53□□□□□ -0.4not detected
SSA1YAL005C MCA1Q08601 432 aa12.53□□□□□ -0.4
SSA1YAL005C MF(ALPHA)1P01149 165 aa12.52□□□□□ -0.4
SSA1YAL005C MSN2P33748 704 aa12.52□□□□□ -0.4
SSA1YAL005C YHL012WP38709 493 aa12.52□□□□□ -0.4
SSA1YAL005C YJL068CP40363 299 aa12.52□□□□□ -0.4
SSA1YAL005C JHD2P47156 728 aaPredicted RBP12.52□□□□□ -0.4
SSA1YAL005C ORM2Q06144 216 aa12.52□□□□□ -0.4
SSA1YAL005C RRT8Q08219 342 aa12.52□□□□□ -0.4
SSA1YAL005C YIL002W-AQ3E7Z5 69 aa12.52□□□□□ -0.4
SSA1YAL005C WBP1P33767 430 aaKnown RBP12.52□□□□□ -0.41
SSA1YAL005C PEX18P38855 283 aa12.52□□□□□ -0.41
SSA1YAL005C FDH1Q08911 376 aa12.52□□□□□ -0.41
SSA1YAL005C MMP1Q12372 583 aa12.52□□□□□ -0.41
SSA1YAL005C TOR1P35169 2470 aa12.51□□□□□ -0.41
SSA1YAL005C YFL066CP43538 392 aa12.51□□□□□ -0.41
SSA1YAL005C REH1Q06709 432 aa12.51□□□□□ -0.41
SSA1YAL005C YOL159C-AQ3E769 90 aa12.51□□□□□ -0.41
SSA1YAL005C SUI3P09064 285 aaKnown RBP12.5□□□□□ -0.41
SSA1YAL005C HOP09932 586 aa12.5□□□□□ -0.41
SSA1YAL005C URA4P20051 364 aa12.5□□□□□ -0.41
SSA1YAL005C HIR2P32480 875 aa12.5□□□□□ -0.41
SSA1YAL005C KAP122P32767 1081 aa12.5□□□□□ -0.41
SSA1YAL005C SPC34P36131 295 aa12.5□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 88.7 ms