RNA–Protein interactions for RNA: ENST00000641923.1

SAMMSON-223, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, human

Gene SAMMSON, Length 1,213 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMMSON-223	ENST00000641923	CCSER1	Q9C0I3	900 aa		10.07	□□□□□ -0.8
SAMMSON-223	ENST00000641923	UPF3A	Q9H1J1	476 aa	Known RBP	10.07	□□□□□ -0.8
SAMMSON-223	ENST00000641923	MAGEF1	Q9HAY2	307 aa		10.07	□□□□□ -0.8
SAMMSON-223	ENST00000641923	FBXO2	Q9UK22	296 aa	Predicted RBP	10.07	□□□□□ -0.8
SAMMSON-223	ENST00000641923	VAV3	Q9UKW4	847 aa		10.07	□□□□□ -0.8
SAMMSON-223	ENST00000641923	ZNF215	Q9UL58	517 aa	Predicted RBP	10.07	□□□□□ -0.8
SAMMSON-223	ENST00000641923	TRPC6	Q9Y210	931 aa		10.07	□□□□□ -0.8
SAMMSON-223	ENST00000641923	SAMM50	Q9Y512	469 aa		10.07	□□□□□ -0.8
SAMMSON-223	ENST00000641923	WNT7A	O00755	349 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	ATP9A	O75110	1047 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	LYPLA2	O95372	231 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	MBD3	O95983	291 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	XRCC6	P12956	609 aa	Known RBP eCLIP	10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	RPA1	P27694	616 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	MARCKS	P29966	332 aa	Predicted RBP	10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	ACTR2	P61160	394 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	PSMC5	P62195	406 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	CAP1	Q01518	475 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	ARHGAP1	Q07960	439 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	SPIRE1	Q08AE8	756 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	NCAPH2	Q6IBW4	605 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	PLPPR4	Q7Z2D5	763 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	AFAP1L1	Q8TED9	768 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	MRPS27	Q92552	414 aa	Known RBP	10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	TRIM44	Q96DX7	344 aa	Predicted RBP	10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	TSEN34	Q9BSV6	310 aa	Known RBP	10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	LRRC27	Q9C0I9	530 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	SMARCAD1	Q9H4L7	1026 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	ZSWIM4	Q9H7M6	989 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	XPNPEP3	Q9NQH7	507 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	PAK6	Q9NQU5	681 aa	Predicted RBP	10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	PDGFC	Q9NRA1	345 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	STK17A	Q9UEE5	414 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	METRN	Q9UJH8	293 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	PCDHA7	Q9UN72	937 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	DOCK5	Q9H7D0	1870 aa		10.06	□□□□□ -0.8
SAMMSON-223	ENST00000641923	FRMPD3	Q5JV73	1810 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	IGKV6D-21	A0A0A0MT36	114 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	MOXD2P	A6NHM9	499 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	BACH1	O14867	736 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	DYNC1LI2	O43237	492 aa	Predicted RBP	10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	LGR5	O75473	907 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	ARIH2	O95376	493 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	RPLP2	P05387	115 aa	Known RBP	10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	SUPT20HL2	P0C7V6	817 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	TCF7	P36402	384 aa	Predicted RBP	10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	QARS	P47897	775 aa	Known RBP	10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	SP2	Q02086	613 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	FSCN1	Q16658	493 aa	Known RBP	10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	PRAMEF19	Q5SWL8	479 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	HYI	Q5T013	277 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	RESP18	Q5W5W9	173 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	KANK3	Q6NY19	840 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	ABHD15	Q6UXT9	468 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	OTUD6A	Q7L8S5	288 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	CABP7	Q86V35	215 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	C4orf19	Q8IY42	314 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	ANKLE1	Q8NAG6	615 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	SNX29	Q8TEQ0	813 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	ZNF333	Q96JL9	665 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	GPR20	Q99678	358 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	TMEM106C	Q9BVX2	250 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	CSRNP2	Q9H175	543 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	UNC45A	Q9H3U1	944 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	ZNF302	Q9NR11	478 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	ERAP1	Q9NZ08	941 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	PKD2L1	Q9P0L9	805 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	HOOK1	Q9UJC3	728 aa	Known RBP	10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	PCDHB13	Q9Y5F0	798 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	CEP350	Q5VT06	3117 aa		10.05	□□□□□ -0.8
SAMMSON-223	ENST00000641923	FAM237A	A0A1B0GTK4	181 aa		10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	POTEM	A6NI47	508 aa		10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	KBTBD13	C9JR72	458 aa		10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	DDX39A	O00148	427 aa	Known RBP	10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	CHMP2A	O43633	222 aa		10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	MYL1	P05976	194 aa		10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	GJB1	P08034	283 aa		10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	MMP3	P08254	477 aa		10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	C6orf222	P0C671	652 aa	Predicted RBP	10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	CCND3	P30281	292 aa	Predicted RBP	10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	CCT6A	P40227	531 aa	Known RBP	10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	STAT5B	P51692	787 aa		10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	ATN1	P54259	1190 aa	Predicted RBP	10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	AMPD3	Q01432	767 aa		10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	IQUB	Q8NA54	791 aa		10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	TRPV1	Q8NER1	839 aa		10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	GLG1	Q92896	1179 aa		10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	ZFP91	Q96JP5	570 aa	Predicted RBP	10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	CCDC43	Q96MW1	224 aa	Known RBP	10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	NACC1	Q96RE7	527 aa		10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	HSD17B14	Q9BPX1	270 aa		10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	EIF2AK1	Q9BQI3	630 aa	Known RBP	10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	JPH2	Q9BR39	696 aa	Predicted RBP	10.04	□□□□□ -0.8
SAMMSON-223	ENST00000641923	RNF208	Q9H0X6	261 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms