RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 PURBQ96QR8 312 aaKnown RBP18.72■□□□□ 0.59
PHGDH-229ENST00000641891 DEF6Q9H4E7 631 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 FEM1BQ9UK73 627 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 PCDHA13Q9Y5I0 950 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 STK24Q9Y6E0 443 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 KCNA1Q09470 495 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 TRAF1Q13077 416 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 KNOP1Q1ED39 458 aaKnown RBP18.71■□□□□ 0.59
PHGDH-229ENST00000641891 RINT1Q6NUQ1 792 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 NOA1Q8NC60 698 aaKnown RBP18.71■□□□□ 0.59
PHGDH-229ENST00000641891 PNKPQ96T60 521 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 IFIH1Q9BYX4 1025 aaKnown RBP18.71■□□□□ 0.59
PHGDH-229ENST00000641891 MYOZ2Q9NPC6 264 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 CTAGE15A4D2H0 777 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 CETN3O15182 167 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 RHOXF2BP0C7M4 288 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 CTAGE8P0CG41 777 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 POLR2FP61218 127 aaKnown RBP18.71■□□□□ 0.59
PHGDH-229ENST00000641891 KIF5AQ12840 1032 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 PPP2R5CQ13362 524 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 PPP4R3CPQ6ZMV5 832 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 CTAGE6Q86UF2 777 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 CTAGE4Q8IX94 777 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 RHOXF2Q9BQY4 288 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 IKZF4Q9H2S9 585 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 SH2D4AQ9H788 454 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 MLXIPQ9HAP2 919 aa18.71■□□□□ 0.59
PHGDH-229ENST00000641891 WRAP73Q9P2S5 460 aaPredicted RBP18.71■□□□□ 0.59
PHGDH-229ENST00000641891 ATAD5Q96QE3 1844 aa18.7■□□□□ 0.58
PHGDH-229ENST00000641891 AKR1B10O60218 316 aa18.7■□□□□ 0.58
PHGDH-229ENST00000641891 TLR2O60603 784 aa18.7■□□□□ 0.58
PHGDH-229ENST00000641891 PLA2G6O60733 806 aa18.7■□□□□ 0.58
PHGDH-229ENST00000641891 GAS7O60861 476 aa18.7■□□□□ 0.58
PHGDH-229ENST00000641891 TBCAO75347 108 aaKnown RBP18.7■□□□□ 0.58
PHGDH-229ENST00000641891 SASH3O75995 380 aa18.7■□□□□ 0.58
PHGDH-229ENST00000641891 GCNT3O95395 438 aa18.7■□□□□ 0.58
PHGDH-229ENST00000641891 RASA3Q14644 834 aa18.7■□□□□ 0.58
PHGDH-229ENST00000641891 CEP55Q53EZ4 464 aa18.7■□□□□ 0.58
PHGDH-229ENST00000641891 HGSNATQ68CP4 663 aa18.7■□□□□ 0.58
PHGDH-229ENST00000641891 UNC45AQ9H3U1 944 aa18.7■□□□□ 0.58
PHGDH-229ENST00000641891 CEP72Q9P209 647 aa18.7■□□□□ 0.58
PHGDH-229ENST00000641891 TRAF3IP3Q9Y228 551 aa18.7■□□□□ 0.58
PHGDH-229ENST00000641891 PHF20L1A8MW92 1017 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 TBC1D8O95759 1140 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 ASNSP08243 561 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 PTGER2P43116 358 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 PLA2G4AP47712 749 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 PRELPP51888 382 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 GFPT1Q06210 699 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-229ENST00000641891 KCNH2Q12809 1159 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 EHBP1Q8NDI1 1231 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 SECISBP2LQ93073 1101 aaKnown RBP18.69■□□□□ 0.58
PHGDH-229ENST00000641891 ZNF577Q9BSK1 485 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 TUFT1Q9NNX1 390 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 COL20A1Q9P218 1284 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 CCPG1Q9ULG6 757 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 CAPN6Q9Y6Q1 641 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 ASTN1O14525 1302 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 ZNF536O15090 1300 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 LCA5LO95447 670 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 MAP3K10Q02779 954 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 ASTE1Q2TB18 679 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-229ENST00000641891 PAPD7Q5XG87 772 aaKnown RBP18.69■□□□□ 0.58
PHGDH-229ENST00000641891 CIAPIN1Q6FI81 312 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 CAPZA3Q96KX2 299 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 VPS33BQ9H267 617 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 SAR1BQ9Y6B6 198 aa18.69■□□□□ 0.58
PHGDH-229ENST00000641891 NFIBO00712 420 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 MOCS3O95396 460 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 BAG6P46379 1132 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 TDRD12Q587J7 1177 aaKnown RBP18.68■□□□□ 0.58
PHGDH-229ENST00000641891 C1orf186Q6ZWK4 172 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 MMS19Q96T76 1030 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 EDEM3Q9BZQ6 932 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 TSGA10Q9BZW7 698 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 PKD2L1Q9P0L9 805 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 DDX39AO00148 427 aaKnown RBP18.68■□□□□ 0.58
PHGDH-229ENST00000641891 ZNF185O15231 689 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 CLIC2O15247 247 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 AKAP3O75969 853 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 ACTN1P12814 892 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 NMT1P30419 496 aaKnown RBP18.68■□□□□ 0.58
PHGDH-229ENST00000641891 EPS15P42566 896 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 CASP4P49662 377 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 SFMBT2Q5VUG0 894 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 MSANTD4Q8NCY6 345 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 IL31RAQ8NI17 732 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 HOOK2Q96ED9 719 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 GANQ9H2C0 597 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 EHMT1Q9H9B1 1298 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 PIM2Q9P1W9 311 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 FAM184BQ9ULE4 1060 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 FER1L6Q2WGJ9 1857 aa18.68■□□□□ 0.58
PHGDH-229ENST00000641891 ASTN2O75129 1339 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-229ENST00000641891 CALUO43852 315 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-229ENST00000641891 ZBTB7AO95365 584 aa18.67■□□□□ 0.58
PHGDH-229ENST00000641891 NR3C1P04150 777 aa18.67■□□□□ 0.58
PHGDH-229ENST00000641891 SF3B2Q13435 895 aaKnown RBP18.67■□□□□ 0.58
PHGDH-229ENST00000641891 BMT2Q1RMZ1 405 aa18.67■□□□□ 0.58
PHGDH-229ENST00000641891 KSR1Q8IVT5 923 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms