RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	PRDM10	Q9NQV6	1147 aa		7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	ARHGEF4	Q9NR80	690 aa		7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	MAGEC2	Q9UBF1	373 aa	Predicted RBP	7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	LAMB2	P55268	1798 aa		7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	ADAMTSL1	Q8N6G6	1762 aa		7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	XDH	P47989	1333 aa		7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	FANCI	Q9NVI1	1328 aa		7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	RTL9	Q8NET4	1388 aa		7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	RASSF10	A6NK89	507 aa		7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	SHOX	O15266	292 aa		7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	RAD17	O75943	681 aa		7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	HSPA1A	P0DMV8	641 aa	Known RBP	7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	HSPA1B	P0DMV9	641 aa	Known RBP	7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	CD247	P20963	164 aa		7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	MAP4	P27816	1152 aa	Known RBP	7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	ECE1	P42892	770 aa		7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	GPSM2	P81274	684 aa		7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	MBTPS1	Q14703	1052 aa		7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	CCDC184	Q52MB2	194 aa		7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	ANKRD39	Q53RE8	183 aa		7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	FAM209A	Q5JX71	171 aa		7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	SEZ6L2	Q6UXD5	910 aa		7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	TBC1D16	Q8TBP0	767 aa		7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	UTP4	Q969X6	686 aa	Known RBP	7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	MEGF10	Q96KG7	1140 aa		7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	EXOC2	Q96KP1	924 aa		7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	ABT1	Q9ULW3	272 aa	Known RBP	7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	DDX60	Q8IY21	1712 aa	Known RBP	7.74	□□□□□ -1.17
CASC19-238	ENST00000641523	ECE2	O60344	883 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	LRRN2	O75325	713 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	UFL1	O94874	794 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	PPP2R2A	P63151	447 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	RNF4	P78317	190 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	MAP2K1	Q02750	393 aa	Predicted RBP	7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	MAP7	Q14244	749 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	ADGRE1	Q14246	886 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	CBX2	Q14781	532 aa	Predicted RBP	7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	DEFB115	Q30KQ5	88 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	ZNF227	Q86WZ6	799 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	ARMC10	Q8N2F6	343 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	TOP6BL	Q8N6T0	577 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	ADCY4	Q8NFM4	1077 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	LINS1	Q8NG48	757 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	DNAAF4	Q8WXU2	420 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	BRINP2	Q9C0B6	783 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	GBP3	Q9H0R5	595 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	GP6	Q9HCN6	339 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	C1GALT1	Q9NS00	363 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	BSDC1	Q9NW68	430 aa	Predicted RBP	7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	POLL	Q9UGP5	575 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	CNOT7	Q9UIV1	285 aa	Known RBP	7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	FBXL21	Q9UKT6	434 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	PRKAB1	Q9Y478	270 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	COL4A3BP	Q9Y5P4	624 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523	DUOX1	Q9NRD9	1551 aa		7.73	□□□□□ -1.17
CASC19-238	ENST00000641523		A0A0U1RQG5	324 aa	Predicted RBP	7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	TBX1	O43435	398 aa		7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	PPM1B	O75688	479 aa		7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	IGKV5-2	P06315	115 aa		7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	CENPB	P07199	599 aa	Predicted RBP	7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	IGHMBP2	P38935	993 aa	Known RBP	7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	GRIA2	P42262	883 aa		7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	MASP1	P48740	699 aa		7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	MMP14	P50281	582 aa		7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	HSP90AA2P	Q14568	343 aa	Predicted RBP	7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	NFKBIB	Q15653	356 aa		7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	HSP90AB4P	Q58FF6	505 aa		7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	RNF141	Q8WVD5	230 aa		7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	MYRFL	Q96LU7	910 aa		7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	CDC6	Q99741	560 aa		7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	PLA2G12B	Q9BX93	195 aa		7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	DBNDD1	Q9H9R9	158 aa		7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	PGAP2	Q9UHJ9	254 aa		7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	ZNF609	O15014	1411 aa		7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	CACNA1F	O60840	1977 aa		7.72	□□□□□ -1.17
CASC19-238	ENST00000641523	TRAV20	A0A0B4J274	112 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	FAM95C	A0A1B0GW59	222 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	YDJC	A8MPS7	323 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	PSMD14	O00487	310 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	LEFTY1	O75610	366 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	EOMES	O95936	686 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	ETV3	P41162	512 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	GCKR	Q14397	625 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	NBPF9	Q3BBW0	867 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	ZC3H12B	Q5HYM0	836 aa	Known RBP	7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	UBE3B	Q7Z3V4	1068 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	SLC51A	Q86UW1	340 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	FAM20C	Q8IXL6	584 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	SMC5	Q8IY18	1101 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	DZIP1L	Q8IYY4	767 aa	Known RBP	7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	SYNPO	Q8N3V7	929 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	BVES	Q8NE79	360 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	AGBL3	Q8NEM8	1001 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	TTLL11	Q8NHH1	800 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	PMM1	Q92871	262 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	BRF1	Q92994	677 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	SCARF2	Q96GP6	870 aa	Predicted RBP	7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	HHIPL1	Q96JK4	782 aa		7.71	□□□□□ -1.17
CASC19-238	ENST00000641523	AARSD1	Q9BTE6	412 aa	Known RBP	7.71	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms