RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 LMBR1Q8WVP7 490 aa30.18■■■□□ 2.42
VEGFA-231ENST00000640499 TEKT3Q9BXF9 490 aa30.18■■■□□ 2.42
VEGFA-231ENST00000640499 SMC3Q9UQE7 1217 aa30.18■■■□□ 2.42
VEGFA-231ENST00000640499 U2AF2P26368 475 aaKnown RBP eCLIP30.17■■■□□ 2.422e-48■□□□□ 11.2
VEGFA-231ENST00000640499 FPGSQ05932 587 aa30.17■■■□□ 2.42
VEGFA-231ENST00000640499 PTK7Q13308 1070 aa30.17■■■□□ 2.42
VEGFA-231ENST00000640499 HABP4Q5JVS0 413 aaKnown RBP30.17■■■□□ 2.42
VEGFA-231ENST00000640499 C9orf50Q5SZB4 431 aa30.17■■■□□ 2.42
VEGFA-231ENST00000640499 MARCH8Q5T0T0 291 aa30.17■■■□□ 2.42
VEGFA-231ENST00000640499 MIS18BP1Q6P0N0 1132 aa30.17■■■□□ 2.42
VEGFA-231ENST00000640499 TRAF7Q6Q0C0 670 aa30.17■■■□□ 2.42
VEGFA-231ENST00000640499 SERINC5Q86VE9 423 aa30.17■■■□□ 2.42
VEGFA-231ENST00000640499 SMAP1Q8IYB5 467 aaPredicted RBP30.17■■■□□ 2.42
VEGFA-231ENST00000640499 SNX21Q969T3 373 aa30.17■■■□□ 2.42
VEGFA-231ENST00000640499 SCLYQ96I15 445 aa30.17■■■□□ 2.42
VEGFA-231ENST00000640499 AZI2Q9H6S1 392 aa30.17■■■□□ 2.42
VEGFA-231ENST00000640499 VAV3Q9UKW4 847 aa30.17■■■□□ 2.42
VEGFA-231ENST00000640499 NOD1Q9Y239 953 aa30.17■■■□□ 2.42
VEGFA-231ENST00000640499 PCDHA10Q9Y5I2 948 aa30.17■■■□□ 2.42
VEGFA-231ENST00000640499 MAFBQ9Y5Q3 323 aaPredicted RBP30.17■■■□□ 2.42
VEGFA-231ENST00000640499 RBL2Q08999 1139 aa30.16■■■□□ 2.42
VEGFA-231ENST00000640499 GPNMBQ14956 572 aa30.16■■■□□ 2.42
VEGFA-231ENST00000640499 ATP6V0A1Q93050 837 aa30.16■■■□□ 2.42
VEGFA-231ENST00000640499 FAM20AQ96MK3 541 aa30.16■■■□□ 2.42
VEGFA-231ENST00000640499 NAP1L4Q99733 375 aaKnown RBP30.16■■■□□ 2.42
VEGFA-231ENST00000640499 ZNF302Q9NR11 478 aa30.16■■■□□ 2.42
VEGFA-231ENST00000640499 DISC1Q9NRI5 854 aa30.16■■■□□ 2.42
VEGFA-231ENST00000640499 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.16■■■□□ 2.42
VEGFA-231ENST00000640499 SCN5AQ14524 2016 aa30.15■■■□□ 2.42
VEGFA-231ENST00000640499 PITPNM1O00562 1244 aa30.15■■■□□ 2.42
VEGFA-231ENST00000640499 SHHQ15465 462 aa30.15■■■□□ 2.42
VEGFA-231ENST00000640499 NOSTRINQ8IVI9 506 aa30.15■■■□□ 2.42
VEGFA-231ENST00000640499 ZBTB10Q96DT7 871 aa30.15■■■□□ 2.42
VEGFA-231ENST00000640499 NRCAMQ92823 1304 aa30.15■■■□□ 2.42
VEGFA-231ENST00000640499 KAT6AQ92794 2004 aa30.15■■■□□ 2.42
VEGFA-231ENST00000640499 WDR64B1ANS9 1081 aa30.14■■■□□ 2.42
VEGFA-231ENST00000640499 K7ELQ4 463 aaPredicted RBP30.14■■■□□ 2.42
VEGFA-231ENST00000640499 EML1O00423 815 aa30.14■■■□□ 2.42
VEGFA-231ENST00000640499 BACH1O14867 736 aa30.14■■■□□ 2.42
VEGFA-231ENST00000640499 TBX3O15119 743 aa30.14■■■□□ 2.42
VEGFA-231ENST00000640499 CHMP2AO43633 222 aa30.14■■■□□ 2.42
VEGFA-231ENST00000640499 IQCF3P0C7M6 154 aa30.14■■■□□ 2.42
VEGFA-231ENST00000640499 INSRRP14616 1297 aa30.14■■■□□ 2.42
VEGFA-231ENST00000640499 PPFIA1Q13136 1202 aa30.14■■■□□ 2.42
VEGFA-231ENST00000640499 GRIK4Q16099 956 aa30.14■■■□□ 2.42
VEGFA-231ENST00000640499 UGCGQ16739 394 aa30.14■■■□□ 2.42
VEGFA-231ENST00000640499 TMEM199Q8N511 208 aa30.14■■■□□ 2.42
VEGFA-231ENST00000640499 GABBR1Q9UBS5 961 aa30.14■■■□□ 2.42
VEGFA-231ENST00000640499 ZNF862O60290 1169 aa30.13■■■□□ 2.41
VEGFA-231ENST00000640499 PSAPP07602 524 aa30.13■■■□□ 2.41
VEGFA-231ENST00000640499 CKBP12277 381 aa30.13■■■□□ 2.41
VEGFA-231ENST00000640499 ATP2B1P20020 1258 aa30.13■■■□□ 2.41
VEGFA-231ENST00000640499 TOB1P50616 345 aaPredicted RBP30.13■■■□□ 2.41
VEGFA-231ENST00000640499 FAM160B1Q5W0V3 765 aa30.13■■■□□ 2.41
VEGFA-231ENST00000640499 TDHQ8IZJ6 230 aa30.13■■■□□ 2.41
VEGFA-231ENST00000640499 MTMR9Q96QG7 549 aa30.13■■■□□ 2.41
VEGFA-231ENST00000640499 TMEM60Q9H2L4 133 aa30.13■■■□□ 2.41
VEGFA-231ENST00000640499 MYH9P35579 1960 aaKnown RBP30.12■■■□□ 2.41
VEGFA-231ENST00000640499 A0A1W2PPC1 479 aa30.12■■■□□ 2.41
VEGFA-231ENST00000640499 POTEB3A0JP26 581 aa30.12■■■□□ 2.41
VEGFA-231ENST00000640499 MBLAC1A4D2B0 266 aaPredicted RBP30.12■■■□□ 2.41
VEGFA-231ENST00000640499 ACRP10323 421 aa30.12■■■□□ 2.41
VEGFA-231ENST00000640499 SLC26A2P50443 739 aa30.12■■■□□ 2.41
VEGFA-231ENST00000640499 SPIRE1Q08AE8 756 aa30.12■■■□□ 2.41
VEGFA-231ENST00000640499 PPP2R5CQ13362 524 aa30.12■■■□□ 2.41
VEGFA-231ENST00000640499 BFSP2Q13515 415 aa30.12■■■□□ 2.41
VEGFA-231ENST00000640499 PDXDC2PQ6P474 469 aa30.12■■■□□ 2.41
VEGFA-231ENST00000640499 POTEBQ6S5H4 581 aa30.12■■■□□ 2.41
VEGFA-231ENST00000640499 RUFY4Q6ZNE9 571 aa30.12■■■□□ 2.41
VEGFA-231ENST00000640499 CAGE1Q8TC20 777 aa30.12■■■□□ 2.41
VEGFA-231ENST00000640499 TRAPPC12Q8WVT3 735 aa30.12■■■□□ 2.41
VEGFA-231ENST00000640499 KIF3AQ9Y496 699 aa30.12■■■□□ 2.41
VEGFA-231ENST00000640499 SAMM50Q9Y512 469 aa30.12■■■□□ 2.41
VEGFA-231ENST00000640499 IGSF9BQ9UPX0 1349 aa30.12■■■□□ 2.41
VEGFA-231ENST00000640499 TANC1Q9C0D5 1861 aa30.12■■■□□ 2.41
VEGFA-231ENST00000640499 LAMA3Q16787 3333 aa30.12■■■□□ 2.41
VEGFA-231ENST00000640499 ZBTB42B2RXF5 422 aa30.11■■■□□ 2.41
VEGFA-231ENST00000640499 SFNP31947 248 aa30.11■■■□□ 2.41
VEGFA-231ENST00000640499 JAK3P52333 1124 aa30.11■■■□□ 2.41
VEGFA-231ENST00000640499 PPIGQ13427 754 aaKnown RBP eCLIP30.11■■■□□ 2.411e-7■■□□□ 12.5
VEGFA-231ENST00000640499 ATP8B4Q8TF62 1192 aa30.11■■■□□ 2.41
VEGFA-231ENST00000640499 IL23AQ9NPF7 189 aa30.11■■■□□ 2.41
VEGFA-231ENST00000640499 STBD1O95210 358 aa30.1■■■□□ 2.41
VEGFA-231ENST00000640499 GNAT1P11488 350 aa30.1■■■□□ 2.41
VEGFA-231ENST00000640499 IGBP1P78318 339 aa30.1■■■□□ 2.41
VEGFA-231ENST00000640499 NBR1Q14596 966 aa30.1■■■□□ 2.41
VEGFA-231ENST00000640499 ZNF174Q15697 407 aa30.1■■■□□ 2.41
VEGFA-231ENST00000640499 TMEM240Q5SV17 173 aa30.1■■■□□ 2.41
VEGFA-231ENST00000640499 ZNF618Q5T7W0 954 aa30.1■■■□□ 2.41
VEGFA-231ENST00000640499 MIER3Q7Z3K6 550 aa30.1■■■□□ 2.41
VEGFA-231ENST00000640499 RDM1Q8NG50 284 aa30.1■■■□□ 2.41
VEGFA-231ENST00000640499 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.1■■■□□ 2.411e-12■■■□□ 14.7
VEGFA-231ENST00000640499 TRPC6Q9Y210 931 aa30.1■■■□□ 2.41
VEGFA-231ENST00000640499 MCM7P33993 719 aa30.09■■■□□ 2.41
VEGFA-231ENST00000640499 MBTPS1Q14703 1052 aa30.09■■■□□ 2.41
VEGFA-231ENST00000640499 LARP1BQ659C4 914 aaKnown RBP30.09■■■□□ 2.41
VEGFA-231ENST00000640499 RETREG2Q8NC44 543 aa30.09■■■□□ 2.41
VEGFA-231ENST00000640499 TET1Q8NFU7 2136 aa30.09■■■□□ 2.41
VEGFA-231ENST00000640499 INTS4Q96HW7 963 aaKnown RBP30.09■■■□□ 2.41
VEGFA-231ENST00000640499 TCEAL9Q9UHQ7 104 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms