RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 TTLL11Q8NHH1 800 aa4.69□□□□□ -1.66
ATM-230ENST00000640388 ZCCHC4Q9H5U6 513 aa4.69□□□□□ -1.66
ATM-230ENST00000640388 TRIM39Q9HCM9 518 aa4.69□□□□□ -1.66
ATM-230ENST00000640388 NTMQ9P121 344 aa4.69□□□□□ -1.66
ATM-230ENST00000640388 SRPK3Q9UPE1 567 aa4.69□□□□□ -1.66
ATM-230ENST00000640388 MRPL42Q9Y6G3 142 aaKnown RBP4.69□□□□□ -1.66
ATM-230ENST00000640388 RIMS1Q86UR5 1692 aaKnown RBP4.69□□□□□ -1.66
ATM-230ENST00000640388 SETBP1Q9Y6X0 1596 aa4.69□□□□□ -1.66
ATM-230ENST00000640388 SH3D21A4FU49 640 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 MAN2B1O00754 1011 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 CKMP06732 381 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 KCNA6P17658 529 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 THBS2P35442 1172 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 RANGAP1P46060 587 aaPredicted RBP4.68□□□□□ -1.66
ATM-230ENST00000640388 SLURP1P55000 103 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 ADAM9Q13443 819 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 C21orf62-AS1Q17RA5 79 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 BTBD8Q5XKL5 378 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 LIPIQ6XZB0 460 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 HOMER1Q86YM7 354 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 CARFQ8N187 725 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 SYT8Q8NBV8 401 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 RELTQ969Z4 430 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 ZSWIM3Q96MP5 696 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 SPATA25Q9BR10 227 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 RIC8BQ9NVN3 520 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 FANCLQ9NW38 375 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 RTEL1Q9NZ71 1219 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 WASF3Q9UPY6 502 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 PEG3Q9GZU2 1588 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 BCORL1Q5H9F3 1711 aa4.68□□□□□ -1.66
ATM-230ENST00000640388 A0A0G2JLL6 359 aaPredicted RBP4.67□□□□□ -1.66
ATM-230ENST00000640388 FAM90A27PA6NNH2 459 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 ZNF561-AS1K7EIQ3 104 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 ACOT7O00154 380 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 SASH1O94885 1247 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 PTPN1P18031 435 aaKnown RBP4.67□□□□□ -1.66
ATM-230ENST00000640388 KCNC1P48547 511 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 SARSP49591 514 aaKnown RBP4.67□□□□□ -1.66
ATM-230ENST00000640388 LACTBP83111 547 aaPredicted RBP4.67□□□□□ -1.66
ATM-230ENST00000640388 PABPC4Q13310 644 aaKnown RBP eCLIP4.67□□□□□ -1.66
ATM-230ENST00000640388 TCEA2Q15560 299 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 VASNQ6EMK4 673 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 ABHD17CQ6PCB6 329 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 JAZF1Q86VZ6 243 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 PROSER1Q86XN7 944 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 IGSF22Q8N9C0 903 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 APPBP2Q92624 585 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 CLIC6Q96NY7 704 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 TMEM209Q96SK2 561 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 CELF4Q9BZC1 486 aaKnown RBP4.67□□□□□ -1.66
ATM-230ENST00000640388 PDGFDQ9GZP0 370 aaPredicted RBP4.67□□□□□ -1.66
ATM-230ENST00000640388 SMURF1Q9HCE7 757 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 HSPBP1Q9NZL4 362 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 CROTQ9UKG9 612 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 ATP23Q9Y6H3 246 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 CFAP43Q8NDM7 1665 aa4.67□□□□□ -1.66
ATM-230ENST00000640388 SHROOM2Q13796 1616 aa4.66□□□□□ -1.66
ATM-230ENST00000640388 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.66□□□□□ -1.66
ATM-230ENST00000640388 DDX3XO00571 662 aaKnown RBP eCLIP4.66□□□□□ -1.663e-6■■□□□ 11.7
ATM-230ENST00000640388 OPA1O60313 960 aa4.66□□□□□ -1.66
ATM-230ENST00000640388 DNAJC8O75937 253 aaPredicted RBP4.66□□□□□ -1.66
ATM-230ENST00000640388 ENO2P09104 434 aaPredicted RBP4.66□□□□□ -1.66
ATM-230ENST00000640388 SDSP20132 328 aa4.66□□□□□ -1.66
ATM-230ENST00000640388 RPL13P26373 211 aaKnown RBP4.66□□□□□ -1.66
ATM-230ENST00000640388 IGFALSP35858 605 aa4.66□□□□□ -1.66
ATM-230ENST00000640388 FIGNQ5HY92 759 aa4.66□□□□□ -1.66
ATM-230ENST00000640388 PHF19Q5T6S3 580 aa4.66□□□□□ -1.66
ATM-230ENST00000640388 PRAMEF18Q5VWM3 479 aa4.66□□□□□ -1.66
ATM-230ENST00000640388 CD276Q5ZPR3 534 aa4.66□□□□□ -1.66
ATM-230ENST00000640388 OVCH1Q7RTY7 1134 aa4.66□□□□□ -1.66
ATM-230ENST00000640388 NOP9Q86U38 636 aaKnown RBP4.66□□□□□ -1.66
ATM-230ENST00000640388 SP8Q8IXZ3 490 aa4.66□□□□□ -1.66
ATM-230ENST00000640388 ZDHHC14Q8IZN3 488 aa4.66□□□□□ -1.66
ATM-230ENST00000640388 SYNPOQ8N3V7 929 aa4.66□□□□□ -1.66
ATM-230ENST00000640388 FEZF2Q8TBJ5 459 aa4.66□□□□□ -1.66
ATM-230ENST00000640388 LUC7LQ9NQ29 371 aaKnown RBP4.66□□□□□ -1.66
ATM-230ENST00000640388 SAMD15Q9P1V8 674 aa4.66□□□□□ -1.66
ATM-230ENST00000640388 CD2APQ9Y5K6 639 aa4.66□□□□□ -1.66
ATM-230ENST00000640388 TNPO3Q9Y5L0 923 aaKnown RBP4.66□□□□□ -1.66
ATM-230ENST00000640388 YEATS2Q9ULM3 1422 aa4.65□□□□□ -1.66
ATM-230ENST00000640388 OTOL1A6NHN0 477 aaPredicted RBP4.65□□□□□ -1.67
ATM-230ENST00000640388 B4E1Z4 1266 aa4.65□□□□□ -1.67
ATM-230ENST00000640388 SCDO00767 359 aa4.65□□□□□ -1.67
ATM-230ENST00000640388 CDC45O75419 566 aa4.65□□□□□ -1.67
ATM-230ENST00000640388 RFPL3O75679 317 aa4.65□□□□□ -1.67
ATM-230ENST00000640388 NPTXRO95502 500 aa4.65□□□□□ -1.67
ATM-230ENST00000640388 ASLP04424 464 aa4.65□□□□□ -1.67
ATM-230ENST00000640388 IL13P35225 146 aa4.65□□□□□ -1.67
ATM-230ENST00000640388 GLRBP48167 497 aa4.65□□□□□ -1.67
ATM-230ENST00000640388 PFKPQ01813 784 aa4.65□□□□□ -1.67
ATM-230ENST00000640388 ZNF460Q14592 562 aa4.65□□□□□ -1.67
ATM-230ENST00000640388 RTP5Q14D33 572 aa4.65□□□□□ -1.67
ATM-230ENST00000640388 TKFCQ3LXA3 575 aa4.65□□□□□ -1.67
ATM-230ENST00000640388 TMEM177Q53S58 311 aa4.65□□□□□ -1.67
ATM-230ENST00000640388 PRR31Q5SQ13 230 aa4.65□□□□□ -1.67
ATM-230ENST00000640388 CPZQ66K79 652 aa4.65□□□□□ -1.67
ATM-230ENST00000640388 MCTP2Q6DN12 878 aa4.65□□□□□ -1.67
ATM-230ENST00000640388 ZCCHC8Q6NZY4 707 aaKnown RBP4.65□□□□□ -1.67
ATM-230ENST00000640388 HHIPL2Q6UWX4 724 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms