RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 CCDC50Q8IVM0 306 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 MSANTD4Q8NCY6 345 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 FAM76AQ8TAV0 307 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 CNOT6LQ96LI5 555 aaKnown RBP13.59□□□□□ -0.23
SPIN3-236ENST00000640131 P2RX7Q99572 595 aaKnown RBP13.59□□□□□ -0.23
SPIN3-236ENST00000640131 SWAP70Q9UH65 585 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 PUF60Q9UHX1 559 aaKnown RBP13.59□□□□□ -0.23
SPIN3-236ENST00000640131 ADGRG1Q9Y653 693 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 YDJCA8MPS7 323 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 MEIS1O00470 390 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 RHOBTB3O94955 611 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 MYL1P05976 194 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 FESP07332 822 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 ECE1P42892 770 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 CWF19L1Q69YN2 538 aaKnown RBP13.58□□□□□ -0.24
SPIN3-236ENST00000640131 TTI2Q6NXR4 508 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 SV2BQ7L1I2 683 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 SRGAP1Q7Z6B7 1085 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 FAM81AQ8TBF8 368 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 LARP4BQ92615 738 aaKnown RBP13.58□□□□□ -0.24
SPIN3-236ENST00000640131 ZDHHC15Q96MV8 337 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 MTMR9Q96QG7 549 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 CSRNP1Q96S65 589 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 VCPKMTQ9H867 229 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 AGPAT5Q9NUQ2 364 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 LAD1O00515 517 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 VSNL1P62760 191 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 DBN1Q16643 649 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 MIGA2Q7L4E1 593 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 FAM228AQ86W67 206 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 SIAH1Q8IUQ4 282 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 MFN1Q8IWA4 741 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 CCDC155Q8N6L0 562 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 MAGEC3Q8TD91 643 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 HAS1Q92839 578 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 BICD1Q96G01 975 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 TUBGCP2Q9BSJ2 902 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 FGFBP2Q9BYJ0 223 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 TSPYL2Q9H2G4 693 aaPredicted RBP13.58□□□□□ -0.24
SPIN3-236ENST00000640131 RIC8AQ9NPQ8 531 aa13.58□□□□□ -0.24
SPIN3-236ENST00000640131 POTEB3A0JP26 581 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 POTECB2RU33 542 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 F5H6K3 240 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 EIF3HO15372 352 aaKnown RBP eCLIP13.57□□□□□ -0.24
SPIN3-236ENST00000640131 AARSP49588 968 aaKnown RBP eCLIP13.57□□□□□ -0.24
SPIN3-236ENST00000640131 KLRC3Q07444 240 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 ABCB5Q2M3G0 1257 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 KRT79Q5XKE5 535 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 MIS18BP1Q6P0N0 1132 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 POTEBQ6S5H4 581 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 FCHSD1Q86WN1 690 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 NELFCDQ8IXH7 590 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 P2RX5Q93086 422 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 PANX2Q96RD6 677 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 SEMA6BQ9H3T3 888 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 ZNF277Q9NRM2 450 aaPredicted RBP13.57□□□□□ -0.24
SPIN3-236ENST00000640131 H7C1D1 291 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 PLSCR1O15162 318 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 RHOXF2BP0C7M4 288 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 SLC8A1P32418 973 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 NOVP48745 357 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 ZBED6P86452 979 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 RNF187Q5TA31 235 aaPredicted RBP13.57□□□□□ -0.24
SPIN3-236ENST00000640131 CNGA4Q8IV77 575 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 MB21D1Q8N884 522 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 DDX12PQ92771 950 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 CCDC114Q96M63 670 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 SLX1AQ9BQ83 275 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 RHOXF2Q9BQY4 288 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 CAPS2Q9BXY5 557 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 RANBP17Q9H2T7 1088 aaKnown RBP13.57□□□□□ -0.24
SPIN3-236ENST00000640131 PI4KBQ9UBF8 816 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 PCDHGC5Q9Y5F6 944 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 PLIN4Q96Q06 1357 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 TRIM21P19474 475 aaKnown RBP13.57□□□□□ -0.24
SPIN3-236ENST00000640131 GNGT1P63211 74 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 KIF4BQ2VIQ3 1234 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 PRR16Q569H4 304 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 STRIP1Q5VSL9 837 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 ARHGAP22Q7Z5H3 698 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 CCDC13Q8IYE1 715 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 RIN2Q8WYP3 895 aaPredicted RBP13.57□□□□□ -0.24
SPIN3-236ENST00000640131 HOOK2Q96ED9 719 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 AK8Q96MA6 479 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 OSBPL9Q96SU4 736 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 PCDHA12Q9UN75 941 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 KIAA1024Q9UPX6 916 aa13.57□□□□□ -0.24
SPIN3-236ENST00000640131 PCNTO95613 3336 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 SIPA1L1O43166 1804 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 A0A1W2PRG0 241 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 FAM170AA1A519 330 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 GOLGA6CA6NDK9 693 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 GOLGA6BA6NDN3 693 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 NDUFB10O96000 172 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 GOLGA6DP0CG33 693 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 PAPOLAP51003 745 aaKnown RBP13.56□□□□□ -0.24
SPIN3-236ENST00000640131 CYP4A11Q02928 519 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 PPFIA1Q13136 1202 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 CYP2W1Q8TAV3 490 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 NOC4LQ9BVI4 516 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms