RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 PEX11AO75192 247 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 ATP5HO75947 161 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 HOXA7P31268 230 aaPredicted RBP13.08□□□□□ -0.32
CAPN3-221ENST00000638141 EIF4A3P38919 411 aaKnown RBP13.08□□□□□ -0.32
CAPN3-221ENST00000638141 NR5A1Q13285 461 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 UBE3CQ15386 1083 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 TTI2Q6NXR4 508 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 TBC1D16Q8TBP0 767 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 MDM1Q8TC05 714 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 ACTRT1Q8TDG2 376 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 FAM114A2Q9NRY5 505 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 G3BP2Q9UN86 482 aaKnown RBP13.08□□□□□ -0.32
CAPN3-221ENST00000638141 TJP1Q07157 1748 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 B4E1Z4 1266 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 AKR1B10O60218 316 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 RXRAP19793 462 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 COL23A1Q86Y22 540 aaPredicted RBP13.08□□□□□ -0.32
CAPN3-221ENST00000638141 DNAJC9Q8WXX5 260 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 PTPRN2Q92932 1015 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 ZNF512BQ96KM6 892 aaPredicted RBP13.08□□□□□ -0.32
CAPN3-221ENST00000638141 TMEM237Q96Q45 408 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 NDNQ99608 321 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 TMEM109Q9BVC6 243 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 SLITRK6Q9H5Y7 841 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 INTS9Q9NV88 658 aaKnown RBP13.08□□□□□ -0.32
CAPN3-221ENST00000638141 BTG4Q9NY30 223 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 CEP126Q9P2H0 1117 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 PDP2Q9P2J9 529 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 PNMA2Q9UL42 364 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 RGPD5Q99666 1765 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 SCN11AQ9UI33 1791 aa13.08□□□□□ -0.32
CAPN3-221ENST00000638141 RGPD2P0DJD1 1756 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 PRAMEF22A3QJZ6 481 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 AGTP01019 485 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 LMNAP02545 664 aaKnown RBP13.07□□□□□ -0.32
CAPN3-221ENST00000638141 PLEKP08567 350 aaPredicted RBP13.07□□□□□ -0.32
CAPN3-221ENST00000638141 ADD2P35612 726 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 POLE2P56282 527 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 COBLL1Q53SF7 1204 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 WASHC2DQ5SRD0 308 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 ARL6IP4Q66PJ3 421 aaKnown RBP13.07□□□□□ -0.32
CAPN3-221ENST00000638141 TYW1BQ6NUM6 668 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 STAG2Q8N3U4 1231 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 RBBP8NLQ8NC74 664 aaPredicted RBP13.07□□□□□ -0.32
CAPN3-221ENST00000638141 PLBD2Q8NHP8 589 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 TRIM47Q96LD4 638 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 MTRQ99707 1265 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 UBAC1Q9BSL1 405 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 PHF20Q9BVI0 1012 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 NEUROG2Q9H2A3 272 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 MAGEF1Q9HAY2 307 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 DLGAP2Q9P1A6 1054 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 ARL2BPQ9Y2Y0 163 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 CCDC169A6NNP5 214 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 COBLO75128 1261 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 ECEL1O95672 775 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 CCDC166P0CW27 439 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 GUCY1A2P33402 732 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 LONP1P36776 959 aaKnown RBP13.07□□□□□ -0.32
CAPN3-221ENST00000638141 RFC5P40937 340 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 RAD23BP54727 409 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 FKBP4Q02790 459 aaKnown RBP eCLIP13.07□□□□□ -0.32
CAPN3-221ENST00000638141 PABPC4Q13310 644 aaKnown RBP eCLIP13.07□□□□□ -0.32
CAPN3-221ENST00000638141 NAB2Q15742 525 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 AGGF1Q8N302 714 aaeCLIP13.07□□□□□ -0.32
CAPN3-221ENST00000638141 PIGOQ8TEQ8 1089 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 ATP8B4Q8TF62 1192 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 IWS1Q96ST2 819 aa13.07□□□□□ -0.32
CAPN3-221ENST00000638141 IQCGQ9H095 443 aaKnown RBP13.07□□□□□ -0.32
CAPN3-221ENST00000638141 STMN4Q9H169 189 aaPredicted RBP13.07□□□□□ -0.32
CAPN3-221ENST00000638141 COL18A1P39060 1754 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 BTNL10A8MVZ5 291 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 RHOBTB3O94955 611 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 UNC5CO95185 931 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 DESP17661 470 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 TNFAIP8L3Q5GJ75 292 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 MIIPQ5JXC2 388 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 TTC38Q5R3I4 469 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 RNF220Q5VTB9 566 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 RNF43Q68DV7 783 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 C2CD5Q86YS7 1000 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 KCNV2Q8TDN2 545 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 BLZF1Q9H2G9 400 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 LRMDAQ9H2I8 198 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 TXLNGQ9NUQ3 528 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 NKX1-2Q9UD57 310 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-221ENST00000638141 PRKAG3Q9UGI9 489 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 GDAQ9Y2T3 454 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 MYH4Q9Y623 1939 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 RTL9Q8NET4 1388 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 TRIM49BA6NDI0 452 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 FOXB2Q5VYV0 432 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 BTNL9Q6UXG8 535 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 CCDC84Q86UT8 332 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-221ENST00000638141 DZIP3Q86Y13 1208 aaKnown RBP13.06□□□□□ -0.32
CAPN3-221ENST00000638141 GIMAP8Q8ND71 665 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-221ENST00000638141 OXER1Q8TDS5 423 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 HAPLN3Q96S86 360 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 STK38LQ9Y2H1 464 aa13.06□□□□□ -0.32
CAPN3-221ENST00000638141 COL14A1Q05707 1796 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms