RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 KIF28PB7ZC32 967 aa19.04■□□□□ 0.64
CACNA1A-259ENST00000638114 IPO5O00410 1097 aaKnown RBP19.04■□□□□ 0.64
CACNA1A-259ENST00000638114 EFCAB14O75071 495 aa19.04■□□□□ 0.64
CACNA1A-259ENST00000638114 CA3P07451 260 aa19.04■□□□□ 0.64
CACNA1A-259ENST00000638114 STAT5BP51692 787 aa19.04■□□□□ 0.64
CACNA1A-259ENST00000638114 DEFB103AP81534 67 aa19.04■□□□□ 0.64
CACNA1A-259ENST00000638114 SCRN1Q12765 414 aa19.04■□□□□ 0.64
CACNA1A-259ENST00000638114 PRR16Q569H4 304 aa19.04■□□□□ 0.64
CACNA1A-259ENST00000638114 RUFY4Q6ZNE9 571 aa19.04■□□□□ 0.64
CACNA1A-259ENST00000638114 ZNF577Q9BSK1 485 aa19.04■□□□□ 0.64
CACNA1A-259ENST00000638114 PTPRSQ13332 1948 aa19.04■□□□□ 0.64
CACNA1A-259ENST00000638114 BACH1O14867 736 aa19.03■□□□□ 0.64
CACNA1A-259ENST00000638114 CDKL5O76039 1030 aa19.03■□□□□ 0.64
CACNA1A-259ENST00000638114 CCNE2O96020 404 aa19.03■□□□□ 0.64
CACNA1A-259ENST00000638114 INSRRP14616 1297 aa19.03■□□□□ 0.64
CACNA1A-259ENST00000638114 ANKRD1Q15327 319 aa19.03■□□□□ 0.64
CACNA1A-259ENST00000638114 TAF2Q6P1X5 1199 aa19.03■□□□□ 0.64
CACNA1A-259ENST00000638114 PLPPR4Q7Z2D5 763 aa19.03■□□□□ 0.64
CACNA1A-259ENST00000638114 TMCO2Q7Z6W1 182 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-259ENST00000638114 DBF4BQ8NFT6 615 aa19.03■□□□□ 0.64
CACNA1A-259ENST00000638114 AIFM3Q96NN9 605 aa19.03■□□□□ 0.64
CACNA1A-259ENST00000638114 ZBED2Q9BTP6 218 aa19.03■□□□□ 0.64
CACNA1A-259ENST00000638114 TPCN1Q9ULQ1 816 aa19.03■□□□□ 0.64
CACNA1A-259ENST00000638114 PCDHA4Q9UN74 947 aa19.03■□□□□ 0.64
CACNA1A-259ENST00000638114 RRN3P2A6NIE6 340 aa19.02■□□□□ 0.64
CACNA1A-259ENST00000638114 TLL1O43897 1013 aa19.02■□□□□ 0.64
CACNA1A-259ENST00000638114 ATG7O95352 703 aa19.02■□□□□ 0.64
CACNA1A-259ENST00000638114 CIITAP33076 1130 aa19.02■□□□□ 0.64
CACNA1A-259ENST00000638114 AK2P54819 239 aa19.02■□□□□ 0.64
CACNA1A-259ENST00000638114 PLCB4Q15147 1175 aa19.02■□□□□ 0.64
CACNA1A-259ENST00000638114 RSPH3Q86UC2 560 aa19.02■□□□□ 0.64
CACNA1A-259ENST00000638114 SEPT8Q92599 483 aa19.02■□□□□ 0.64
CACNA1A-259ENST00000638114 TNPO1Q92973 898 aaKnown RBP19.02■□□□□ 0.64
CACNA1A-259ENST00000638114 TBC1D22BQ9NU19 505 aa19.02■□□□□ 0.64
CACNA1A-259ENST00000638114 TCEAL9Q9UHQ7 104 aa19.02■□□□□ 0.64
CACNA1A-259ENST00000638114 MBLAC1A4D2B0 266 aaPredicted RBP19.01■□□□□ 0.63
CACNA1A-259ENST00000638114 DHX15O43143 795 aaKnown RBP19.01■□□□□ 0.63
CACNA1A-259ENST00000638114 PFKFB2O60825 505 aa19.01■□□□□ 0.63
CACNA1A-259ENST00000638114 PLEKHG4Q58EX7 1191 aa19.01■□□□□ 0.63
CACNA1A-259ENST00000638114 FAM26DQ5JW98 314 aa19.01■□□□□ 0.63
CACNA1A-259ENST00000638114 MARCH8Q5T0T0 291 aa19.01■□□□□ 0.63
CACNA1A-259ENST00000638114 FAM160B1Q5W0V3 765 aa19.01■□□□□ 0.63
CACNA1A-259ENST00000638114 MIS18BP1Q6P0N0 1132 aa19.01■□□□□ 0.63
CACNA1A-259ENST00000638114 ABHD15Q6UXT9 468 aa19.01■□□□□ 0.63
CACNA1A-259ENST00000638114 BLIDQ8IZY5 108 aa19.01■□□□□ 0.63
CACNA1A-259ENST00000638114 ZBTB10Q96DT7 871 aa19.01■□□□□ 0.63
CACNA1A-259ENST00000638114 C22orf23Q9BZE7 217 aa19.01■□□□□ 0.63
CACNA1A-259ENST00000638114 OSBPL7Q9BZF2 842 aa19.01■□□□□ 0.63
CACNA1A-259ENST00000638114 MICAL3Q7RTP6 2002 aa19■□□□□ 0.63
CACNA1A-259ENST00000638114 IGKV6D-21A0A0A0MT36 114 aa19■□□□□ 0.63
CACNA1A-259ENST00000638114 POTEB3A0JP26 581 aa19■□□□□ 0.63
CACNA1A-259ENST00000638114 SEC24BO95487 1268 aa19■□□□□ 0.63
CACNA1A-259ENST00000638114 SLC26A2P50443 739 aa19■□□□□ 0.63
CACNA1A-259ENST00000638114 POTEBQ6S5H4 581 aa19■□□□□ 0.63
CACNA1A-259ENST00000638114 RPAINQ86UA6 219 aa19■□□□□ 0.63
CACNA1A-259ENST00000638114 CCDC60Q8IWA6 550 aaPredicted RBP19■□□□□ 0.63
CACNA1A-259ENST00000638114 TBCKQ8TEA7 893 aa19■□□□□ 0.63
CACNA1A-259ENST00000638114 TRAPPC12Q8WVT3 735 aa19■□□□□ 0.63
CACNA1A-259ENST00000638114 DNAJB3Q8WWF6 145 aa19■□□□□ 0.63
CACNA1A-259ENST00000638114 FAM49AQ9H0Q0 323 aaPredicted RBP19■□□□□ 0.63
CACNA1A-259ENST00000638114 CERS4Q9HA82 394 aa19■□□□□ 0.63
CACNA1A-259ENST00000638114 ZNF302Q9NR11 478 aa19■□□□□ 0.63
CACNA1A-259ENST00000638114 CHD7Q9P2D1 2997 aa19■□□□□ 0.63
CACNA1A-259ENST00000638114 STK36Q9NRP7 1315 aa19■□□□□ 0.63
CACNA1A-259ENST00000638114 EYSQ5T1H1 3165 aa18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 DTNBO60941 627 aa18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 CHRNA1P02708 482 aa18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 AMHP03971 560 aa18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 IGFBP4P22692 258 aa18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 USP11P51784 963 aa18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 KRT76Q01546 638 aa18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 ADGRE1Q14246 886 aa18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 GALNT17Q6IS24 598 aa18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 ZNF746Q6NUN9 644 aaPredicted RBP18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 SWSAP1Q6NVH7 229 aa18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 FAM117BQ6P1L5 589 aa18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 PDXDC2PQ6P474 469 aa18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 MYOCDQ8IZQ8 938 aa18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 FAM177A1Q8N128 213 aaPredicted RBP18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 DAGLBQ8NCG7 672 aa18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 LENG9Q96B70 501 aa18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 IL17RAQ96F46 866 aa18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 IFIH1Q9BYX4 1025 aaKnown RBP18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 KCNJ14Q9UNX9 436 aa18.99■□□□□ 0.63
CACNA1A-259ENST00000638114 EDIL3O43854 480 aa18.98■□□□□ 0.63
CACNA1A-259ENST00000638114 HBP1O60381 514 aa18.98■□□□□ 0.63
CACNA1A-259ENST00000638114 ARHGEF15O94989 841 aa18.98■□□□□ 0.63
CACNA1A-259ENST00000638114 GJB5O95377 273 aa18.98■□□□□ 0.63
CACNA1A-259ENST00000638114 GHRP10912 638 aa18.98■□□□□ 0.63
CACNA1A-259ENST00000638114 TAP1Q03518 808 aa18.98■□□□□ 0.63
CACNA1A-259ENST00000638114 MGAT3Q09327 533 aa18.98■□□□□ 0.63
CACNA1A-259ENST00000638114 NPY5RQ15761 445 aa18.98■□□□□ 0.63
CACNA1A-259ENST00000638114 CKAP2LQ8IYA6 745 aa18.98■□□□□ 0.63
CACNA1A-259ENST00000638114 SMAP1Q8IYB5 467 aaPredicted RBP18.98■□□□□ 0.63
CACNA1A-259ENST00000638114 ATP8B4Q8TF62 1192 aa18.98■□□□□ 0.63
CACNA1A-259ENST00000638114 APBB2Q92870 758 aa18.98■□□□□ 0.63
CACNA1A-259ENST00000638114 SAMM50Q9Y512 469 aa18.98■□□□□ 0.63
CACNA1A-259ENST00000638114 CDY2AQ9Y6F7 541 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms