RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 DEF6Q9H4E7 631 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 BCAS3Q9H6U6 928 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 TRAF3IP3Q9Y228 551 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 ENC1O14682 589 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 PRELPP51888 382 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 KIF11P52732 1056 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 TGFB2P61812 414 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 DALRD3Q5D0E6 543 aaKnown RBP23.73■■□□□ 1.39
CLN6-224ENST00000638076 ZNF577Q9BSK1 485 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 CCPG1Q9ULG6 757 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 DUSP10Q9Y6W6 482 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 EGFRP00533 1210 aa23.72■■□□□ 1.39
CLN6-224ENST00000638076 ARP10275 920 aa23.72■■□□□ 1.39
CLN6-224ENST00000638076 NLRC4Q9NPP4 1024 aa23.72■■□□□ 1.39
CLN6-224ENST00000638076 FAM184BQ9ULE4 1060 aa23.72■■□□□ 1.39
CLN6-224ENST00000638076 NOL4O94818 638 aa23.72■■□□□ 1.39
CLN6-224ENST00000638076 ICAM1P05362 532 aa23.72■■□□□ 1.39
CLN6-224ENST00000638076 KIF5AQ12840 1032 aa23.72■■□□□ 1.39
CLN6-224ENST00000638076 CRACR2AQ9BSW2 395 aa23.72■■□□□ 1.39
CLN6-224ENST00000638076 LSM14BQ9BX40 385 aaKnown RBP23.72■■□□□ 1.39
CLN6-224ENST00000638076 FAM53CQ9NYF3 392 aa23.72■■□□□ 1.39
CLN6-224ENST00000638076 CEP72Q9P209 647 aa23.72■■□□□ 1.39
CLN6-224ENST00000638076 ZNF536O15090 1300 aa23.71■■□□□ 1.39
CLN6-224ENST00000638076 SFI1A8K8P3 1242 aa23.71■■□□□ 1.39
CLN6-224ENST00000638076 ZBTB7AO95365 584 aa23.71■■□□□ 1.39
CLN6-224ENST00000638076 SETQ01105 290 aaPredicted RBP23.71■■□□□ 1.39
CLN6-224ENST00000638076 BMS1Q14692 1282 aaKnown RBP23.71■■□□□ 1.39
CLN6-224ENST00000638076 TRAPPC11Q7Z392 1133 aa23.71■■□□□ 1.39
CLN6-224ENST00000638076 IFIH1Q9BYX4 1025 aaKnown RBP23.71■■□□□ 1.39
CLN6-224ENST00000638076 HDAC6Q9UBN7 1215 aa23.71■■□□□ 1.39
CLN6-224ENST00000638076 PDXKO00764 312 aa23.71■■□□□ 1.39
CLN6-224ENST00000638076 ZBTB39O15060 712 aa23.71■■□□□ 1.39
CLN6-224ENST00000638076 AKR1B10O60218 316 aa23.71■■□□□ 1.39
CLN6-224ENST00000638076 ZRANB2O95218 330 aaKnown RBP eCLIP23.71■■□□□ 1.39
CLN6-224ENST00000638076 GCNT3O95395 438 aa23.71■■□□□ 1.39
CLN6-224ENST00000638076 ATP1A1P05023 1023 aaKnown RBP23.71■■□□□ 1.39
CLN6-224ENST00000638076 ARHGAP27Q6ZUM4 889 aa23.71■■□□□ 1.39
CLN6-224ENST00000638076 TEPSINQ96N21 525 aa23.71■■□□□ 1.39
CLN6-224ENST00000638076 PURBQ96QR8 312 aaKnown RBP23.71■■□□□ 1.39
CLN6-224ENST00000638076 TSGA10Q9BZW7 698 aa23.71■■□□□ 1.39
CLN6-224ENST00000638076 PCDHA13Q9Y5I0 950 aa23.71■■□□□ 1.39
CLN6-224ENST00000638076 MACROD2A1Z1Q3 448 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 CALUO43852 315 aaPredicted RBP23.7■■□□□ 1.38
CLN6-224ENST00000638076 EPS15P42566 896 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 HSD17B4P51659 736 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 TNIP1Q15025 636 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 BMT2Q1RMZ1 405 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 KRT222Q8N1A0 295 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 PRPF38AQ8NAV1 312 aaKnown RBP23.7■■□□□ 1.38
CLN6-224ENST00000638076 DEFB129Q9H1M3 183 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 UNC45AQ9H3U1 944 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 FHOD1Q9Y613 1164 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 CTAGE15A4D2H0 777 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 LCA5LO95447 670 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 CTAGE8P0CG41 777 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 KCNH2Q12809 1159 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 C1orf186Q6ZWK4 172 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 CTAGE6Q86UF2 777 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 CTAGE4Q8IX94 777 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 HOOK2Q96ED9 719 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 WDR11Q9BZH6 1224 aa23.7■■□□□ 1.38
CLN6-224ENST00000638076 WDR46O15213 610 aaKnown RBP23.69■■□□□ 1.38
CLN6-224ENST00000638076 SEC31AO94979 1220 aaKnown RBP23.69■■□□□ 1.38
CLN6-224ENST00000638076 POLD1P28340 1107 aa23.69■■□□□ 1.38
CLN6-224ENST00000638076 APBA1Q02410 837 aa23.69■■□□□ 1.38
CLN6-224ENST00000638076 TNFAIP1Q13829 316 aa23.69■■□□□ 1.38
CLN6-224ENST00000638076 SECISBP2LQ93073 1101 aaKnown RBP23.69■■□□□ 1.38
CLN6-224ENST00000638076 MXRA8Q9BRK3 442 aa23.69■■□□□ 1.38
CLN6-224ENST00000638076 OLFML3Q9NRN5 406 aa23.69■■□□□ 1.38
CLN6-224ENST00000638076 TYW1Q9NV66 732 aaKnown RBP23.69■■□□□ 1.38
CLN6-224ENST00000638076 IPO5O00410 1097 aaKnown RBP23.68■■□□□ 1.38
CLN6-224ENST00000638076 NFIBO00712 420 aa23.68■■□□□ 1.38
CLN6-224ENST00000638076 USO1O60763 962 aaKnown RBP23.68■■□□□ 1.38
CLN6-224ENST00000638076 FAM13AO94988 1023 aa23.68■■□□□ 1.38
CLN6-224ENST00000638076 GAP43P17677 238 aa23.68■■□□□ 1.38
CLN6-224ENST00000638076 POLR2FP61218 127 aaKnown RBP23.68■■□□□ 1.38
CLN6-224ENST00000638076 KCNA1Q09470 495 aa23.68■■□□□ 1.38
CLN6-224ENST00000638076 DGKZQ13574 1117 aa23.68■■□□□ 1.38
CLN6-224ENST00000638076 FRMD5Q7Z6J6 570 aa23.68■■□□□ 1.38
CLN6-224ENST00000638076 TEKT3Q9BXF9 490 aa23.68■■□□□ 1.38
CLN6-224ENST00000638076 COL20A1Q9P218 1284 aa23.68■■□□□ 1.38
CLN6-224ENST00000638076 WRAP73Q9P2S5 460 aaPredicted RBP23.68■■□□□ 1.38
CLN6-224ENST00000638076 ARMCX3Q9UH62 379 aaPredicted RBP23.68■■□□□ 1.38
CLN6-224ENST00000638076 ZNF280AP59817 542 aaPredicted RBP23.68■■□□□ 1.38
CLN6-224ENST00000638076 PAPD7Q5XG87 772 aaKnown RBP23.68■■□□□ 1.38
CLN6-224ENST00000638076 HGSNATQ68CP4 663 aa23.68■■□□□ 1.38
CLN6-224ENST00000638076 CC2D1AQ6P1N0 951 aaPredicted RBP23.68■■□□□ 1.38
CLN6-224ENST00000638076 MYCT1Q8N699 235 aa23.68■■□□□ 1.38
CLN6-224ENST00000638076 LPAR1Q92633 364 aa23.68■■□□□ 1.38
CLN6-224ENST00000638076 NUCKS1Q9H1E3 243 aaKnown RBP23.68■■□□□ 1.38
CLN6-224ENST00000638076 ANKZF1Q9H8Y5 726 aa23.68■■□□□ 1.38
CLN6-224ENST00000638076 SAR1BQ9Y6B6 198 aa23.68■■□□□ 1.38
CLN6-224ENST00000638076 ASTN1O14525 1302 aa23.68■■□□□ 1.38
CLN6-224ENST00000638076 ATAD5Q96QE3 1844 aa23.68■■□□□ 1.38
CLN6-224ENST00000638076 NFKBIEO00221 500 aa23.67■■□□□ 1.38
CLN6-224ENST00000638076 PNMA6AP0CW24 399 aaPredicted RBP23.67■■□□□ 1.38
CLN6-224ENST00000638076 TUBB4BP68371 445 aa23.67■■□□□ 1.38
CLN6-224ENST00000638076 SFMBT2Q5VUG0 894 aa23.67■■□□□ 1.38
CLN6-224ENST00000638076 CPXCR1Q8N123 301 aa23.67■■□□□ 1.38
CLN6-224ENST00000638076 PKNOX2Q96KN3 472 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms