RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 PAPOLAP51003 745 aaKnown RBP16.17■□□□□ 0.18
UBE3A-227ENST00000638011 KRT40Q6A162 431 aa16.17■□□□□ 0.18
UBE3A-227ENST00000638011 UBAP1Q9NZ09 502 aa16.17■□□□□ 0.18
UBE3A-227ENST00000638011 NOVA2Q9UNW9 492 aaKnown RBP16.17■□□□□ 0.18
UBE3A-227ENST00000638011 DCLK2Q8N568 766 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 ARHGEF1Q92888 912 aaKnown RBP16.16■□□□□ 0.18
UBE3A-227ENST00000638011 ADPGKQ9BRR6 497 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 WWP1Q9H0M0 922 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 KRT6AP02538 564 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 KRT6BP04259 564 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 KRT19P08727 400 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 KRT6CP48668 564 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 NLRP11P59045 1033 aaKnown RBP16.16■□□□□ 0.18
UBE3A-227ENST00000638011 TSPY1Q01534 308 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 SPDYE1Q8NFV5 336 aaPredicted RBP16.16■□□□□ 0.18
UBE3A-227ENST00000638011 CNPY3Q9BT09 278 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 C19orf44Q9H6X5 657 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 PIK3CAP42336 1068 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 POLR2FP61218 127 aaKnown RBP16.16■□□□□ 0.18
UBE3A-227ENST00000638011 ATP6V1G3Q96LB4 118 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 TBK1Q9UHD2 729 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 PCDHA12Q9UN75 941 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 FAM129AQ9BZQ8 928 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 SMG5Q9UPR3 1016 aaKnown RBP16.16■□□□□ 0.18
UBE3A-227ENST00000638011 SNX14Q9Y5W7 946 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 MYL7Q01449 175 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 FLCNQ8NFG4 579 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 CATSPER2Q96P56 530 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 FOXP1Q9H334 677 aaPredicted RBP16.16■□□□□ 0.18
UBE3A-227ENST00000638011 MED23Q9ULK4 1368 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 ZBTB3Q9H5J0 574 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 ATP8A2Q9NTI2 1148 aa16.16■□□□□ 0.18
UBE3A-227ENST00000638011 CAPN1P07384 714 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 RFC4P35249 363 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 KBTBD3Q8NAB2 608 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 BPIFA3Q9BQP9 254 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 SLC1A4P43007 532 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 ADAM9Q13443 819 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 EYA3Q99504 573 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 TRAPPC8Q9Y2L5 1435 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 MAP3K5Q99683 1374 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 MAFGO15525 162 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 TBC1D9BQ66K14 1250 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 DUOX2Q9NRD8 1548 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 ADGRA3Q8IWK6 1321 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 GPTP24298 496 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 KCTD6Q8NC69 237 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 GPHNQ9NQX3 736 aaPredicted RBP16.15■□□□□ 0.18
UBE3A-227ENST00000638011 SPDYE2BA6NHP3 402 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 SPDYE6P0CI01 402 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 ARL4AP40617 200 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 SETD3Q86TU7 594 aaPredicted RBP16.15■□□□□ 0.18
UBE3A-227ENST00000638011 NLRP14Q86W24 1093 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 ARIH1Q9Y4X5 557 aaPredicted RBP16.15■□□□□ 0.18
UBE3A-227ENST00000638011 LIG4P49917 911 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 YWHAHQ04917 246 aaPredicted RBP16.15■□□□□ 0.18
UBE3A-227ENST00000638011 C16orf89Q6UX73 402 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 RBM41Q96IZ5 413 aaKnown RBP16.15■□□□□ 0.18
UBE3A-227ENST00000638011 IKBIPQ70UQ0 350 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 TRMT44Q8IYL2 757 aaKnown RBP16.15■□□□□ 0.18
UBE3A-227ENST00000638011 GCNT4Q9P109 453 aa16.15■□□□□ 0.18
UBE3A-227ENST00000638011 ITKQ08881 620 aa16.14■□□□□ 0.18
UBE3A-227ENST00000638011 KLHL12Q53G59 568 aa16.14■□□□□ 0.18
UBE3A-227ENST00000638011 V9GY48 417 aaPredicted RBP16.14■□□□□ 0.18
UBE3A-227ENST00000638011 RIMS2Q9UQ26 1411 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 AP3B1O00203 1094 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 CCDC80Q76M96 950 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 OLA1Q9NTK5 396 aaKnown RBP16.14■□□□□ 0.17
UBE3A-227ENST00000638011 VSTM4Q8IW00 320 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 PICK1Q9NRD5 415 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.14■□□□□ 0.17
UBE3A-227ENST00000638011 KIF20BQ96Q89 1820 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 GPAA1O43292 621 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 OR52Z1P0C646 297 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 NUP62P37198 522 aaPredicted RBP16.14■□□□□ 0.17
UBE3A-227ENST00000638011 KCNK16Q96T55 309 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 BEGAINQ9BUH8 593 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 DEPTORQ8TB45 409 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 NT5C1BQ96P26 610 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 ADA2Q9NZK5 511 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 ATP8B3O60423 1300 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 IFRD2Q12894 506 aaPredicted RBP16.14■□□□□ 0.17
UBE3A-227ENST00000638011 PPM1KQ8N3J5 372 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 THAP9Q9H5L6 903 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 TNNQ9UQP3 1299 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 ASAP2O43150 1006 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 ARL13BQ3SXY8 428 aa16.14■□□□□ 0.17
UBE3A-227ENST00000638011 WASLO00401 505 aaPredicted RBP16.13■□□□□ 0.17
UBE3A-227ENST00000638011 ACSL3O95573 720 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 ZNF556Q9HAH1 456 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.13■□□□□ 0.17
UBE3A-227ENST00000638011 ADCK5Q3MIX3 580 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 NLRX1Q86UT6 975 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 NHEJ1Q9H9Q4 299 aaPredicted RBP16.13■□□□□ 0.17
UBE3A-227ENST00000638011 MYH1P12882 1939 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 MYH2Q9UKX2 1941 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 MYH4Q9Y623 1939 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 ATP5J2-PTCD1G3V325 749 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 GGCXP38435 758 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 DMC1Q14565 340 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms