RNA–Protein interactions for RNA: ENST00000637535.1

CACNB4-256, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 1,731 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-256	ENST00000637535	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	7.77	□□□□□ -1.17	7e-6	■□□□□ 9.4
CACNB4-256	ENST00000637535	TUBB2B	Q9BVA1	445 aa		7.77	□□□□□ -1.17
CACNB4-256	ENST00000637535	CRNKL1	Q9BZJ0	848 aa	Known RBP	7.77	□□□□□ -1.17
CACNB4-256	ENST00000637535	IQCG	Q9H095	443 aa	Known RBP	7.77	□□□□□ -1.17
CACNB4-256	ENST00000637535	VCPKMT	Q9H867	229 aa		7.77	□□□□□ -1.17
CACNB4-256	ENST00000637535	TMEM39A	Q9NV64	488 aa		7.77	□□□□□ -1.17
CACNB4-256	ENST00000637535	RGL1	Q9NZL6	768 aa		7.77	□□□□□ -1.17
CACNB4-256	ENST00000637535	SUN2	Q9UH99	717 aa		7.77	□□□□□ -1.17
CACNB4-256	ENST00000637535	TACC3	Q9Y6A5	838 aa		7.77	□□□□□ -1.17
CACNB4-256	ENST00000637535	CHD7	Q9P2D1	2997 aa		7.77	□□□□□ -1.17
CACNB4-256	ENST00000637535	TCRBV5S4A2T	A0A5A2	114 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	ERICH2	A1L162	156 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	MYO1F	O00160	1098 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	MEFV	O15553	781 aa	Predicted RBP	7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	ADCY6	O43306	1168 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	OPA1	O60313	960 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	ZEB2	O60315	1214 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	N4BP1	O75113	896 aa	Known RBP	7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	RNF40	O75150	1001 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	MBD4	O95243	580 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	PYGL	P06737	847 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	ZNF865	P0CJ78	1059 aa	Predicted RBP	7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	SFPQ	P23246	707 aa	Known RBP eCLIP	7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	DNAJB2	P25686	324 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	CDK8	P49336	464 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	NAP1L1	P55209	391 aa	Known RBP	7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	SMAD3	P84022	425 aa	Known RBP	7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	IFFO1	Q0D2I5	559 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	FAAP100	Q0VG06	881 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	MYBPC2	Q14324	1141 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	CASP8	Q14790	479 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	NAA25	Q14CX7	972 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	SNCB	Q16143	134 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	CCDC178	Q5BJE1	867 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	FAM83B	Q5T0W9	1011 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	MICALCL	Q6ZW33	695 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	CCDC170	Q8IYT3	715 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	SDR16C5	Q8N3Y7	309 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	FAM81A	Q8TBF8	368 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	RHPN1	Q8TCX5	695 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	TBC1D5	Q92609	795 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	ZDHHC16	Q969W1	377 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	TINF2	Q9BSI4	451 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	PPP1R12C	Q9BZL4	782 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	BOLA2	Q9H3K6	86 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	MROH8	Q9H579	483 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	CORO1C	Q9ULV4	474 aa	Predicted RBP	7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	PHF24	Q9UPV7	400 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	RIPK3	Q9Y572	518 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	CHD9	Q3L8U1	2897 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	ZNF236	Q9UL36	1845 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	GBF1	Q92538	1859 aa		7.76	□□□□□ -1.17
CACNB4-256	ENST00000637535	USP17L12	C9JPN9	530 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	USP17L21	D6R901	530 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	FANCG	O15287	622 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	ZSCAN12	O43309	604 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	PPFIA3	O75145	1194 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	SDS	P20132	328 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	STAT3	P40763	770 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	ROR2	Q01974	943 aa	Known RBP	7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	FPGS	Q05932	587 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	SNX1	Q13596	522 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	GNL2	Q13823	731 aa	Known RBP	7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	KCNA10	Q16322	511 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	ZNF792	Q3KQV3	632 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	CCDC40	Q4G0X9	1142 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	SLC30A9	Q6PML9	568 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	TMEM179	Q6ZVK1	233 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	C16orf59	Q7L2K0	433 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	MYLK4	Q86YV6	388 aa	Predicted RBP	7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	APLF	Q8IW19	511 aa	Predicted RBP	7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	CPXCR1	Q8N123	301 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	SHCBP1	Q8NEM2	672 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	ATL2	Q8NHH9	583 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	B4GALNT2	Q8NHY0	566 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	VTI1A	Q96AJ9	217 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	DTNBP1	Q96EV8	351 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	ALS2CR12	Q96Q35	445 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	PLEKHA4	Q9H4M7	779 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	PRDM12	Q9H4Q4	367 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	ZNF576	Q9H609	170 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	RMI1	Q9H9A7	625 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	STARD7	Q9NQZ5	370 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	TMX2	Q9Y320	296 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	NCOR1	O75376	2440 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	VWA5A	O00534	786 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	ARHGAP33	O14559	1287 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	EIF3H	O15372	352 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	ADAMTS4	O75173	837 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	SNAI1	O95863	264 aa	Predicted RBP	7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	OAT	P04181	439 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	CSF2RA	P15509	400 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	FER	P16591	822 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	COL9A1	P20849	921 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	IRAK1	P51617	712 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	CDR1	P51861	262 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	ACTN3	Q08043	901 aa	Predicted RBP	7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	KCTD2	Q14681	263 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	KCNB1	Q14721	858 aa		7.75	□□□□□ -1.17
CACNB4-256	ENST00000637535	STX1A	Q16623	288 aa		7.75	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms