RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 AOPEPQ8N6M6 819 aa17.12■□□□□ 0.33
CLN6-219ENST00000637329 NACC1Q96RE7 527 aa17.12■□□□□ 0.33
CLN6-219ENST00000637329 ZSWIM4Q9H7M6 989 aa17.12■□□□□ 0.33
CLN6-219ENST00000637329 JPH1Q9HDC5 661 aaPredicted RBP17.12■□□□□ 0.33
CLN6-219ENST00000637329 SAGE1Q9NXZ1 904 aa17.12■□□□□ 0.33
CLN6-219ENST00000637329 KCND2Q9NZV8 630 aa17.12■□□□□ 0.33
CLN6-219ENST00000637329 PKD2L1Q9P0L9 805 aa17.12■□□□□ 0.33
CLN6-219ENST00000637329 DIS3Q9Y2L1 958 aaKnown RBP17.12■□□□□ 0.33
CLN6-219ENST00000637329 PLXNA1Q9UIW2 1896 aa17.12■□□□□ 0.33
CLN6-219ENST00000637329 DDX39AO00148 427 aaKnown RBP17.11■□□□□ 0.33
CLN6-219ENST00000637329 ATP9AO75110 1047 aa17.11■□□□□ 0.33
CLN6-219ENST00000637329 TM4SF4P48230 202 aa17.11■□□□□ 0.33
CLN6-219ENST00000637329 ZNF792Q3KQV3 632 aa17.11■□□□□ 0.33
CLN6-219ENST00000637329 KMT5BQ4FZB7 885 aa17.11■□□□□ 0.33
CLN6-219ENST00000637329 GPR142Q7Z601 462 aa17.11■□□□□ 0.33
CLN6-219ENST00000637329 PLEKHH3Q7Z736 793 aa17.11■□□□□ 0.33
CLN6-219ENST00000637329 GPBP1Q86WP2 473 aa17.11■□□□□ 0.33
CLN6-219ENST00000637329 REM2Q8IYK8 340 aaPredicted RBP17.11■□□□□ 0.33
CLN6-219ENST00000637329 DDX12PQ92771 950 aa17.11■□□□□ 0.33
CLN6-219ENST00000637329 R3HDMLQ9H3Y0 253 aa17.11■□□□□ 0.33
CLN6-219ENST00000637329 RGL1Q9NZL6 768 aa17.11■□□□□ 0.33
CLN6-219ENST00000637329 SLC9A2Q9UBY0 812 aa17.11■□□□□ 0.33
CLN6-219ENST00000637329 SLC15A5A6NIM6 579 aa17.1■□□□□ 0.33
CLN6-219ENST00000637329 TLR2O60603 784 aa17.1■□□□□ 0.33
CLN6-219ENST00000637329 CCNE2O96020 404 aa17.1■□□□□ 0.33
CLN6-219ENST00000637329 ALDH1A1P00352 501 aa17.1■□□□□ 0.33
CLN6-219ENST00000637329 CYP11B2P19099 503 aa17.1■□□□□ 0.33
CLN6-219ENST00000637329 QARSP47897 775 aaKnown RBP17.1■□□□□ 0.33
CLN6-219ENST00000637329 CCDC173Q0VFZ6 552 aa17.1■□□□□ 0.33
CLN6-219ENST00000637329 PSMD2Q13200 908 aa17.1■□□□□ 0.33
CLN6-219ENST00000637329 STIM1Q13586 685 aa17.1■□□□□ 0.33
CLN6-219ENST00000637329 ISM2Q6H9L7 571 aa17.1■□□□□ 0.33
CLN6-219ENST00000637329 TPH2Q8IWU9 490 aa17.1■□□□□ 0.33
CLN6-219ENST00000637329 DNAJC19Q96DA6 116 aa17.1■□□□□ 0.33
CLN6-219ENST00000637329 ZFYVE28Q9HCC9 887 aa17.1■□□□□ 0.33
CLN6-219ENST00000637329 SLC5A4Q9NY91 659 aa17.1■□□□□ 0.33
CLN6-219ENST00000637329 SAMM50Q9Y512 469 aa17.1■□□□□ 0.33
CLN6-219ENST00000637329 PCDHA10Q9Y5I2 948 aa17.1■□□□□ 0.33
CLN6-219ENST00000637329 SYNRGQ9UMZ2 1314 aa17.1■□□□□ 0.33
CLN6-219ENST00000637329 FRMD3A2A2Y4 597 aa17.09■□□□□ 0.33
CLN6-219ENST00000637329 SSBP05455 408 aaKnown RBP eCLIP17.09■□□□□ 0.33
CLN6-219ENST00000637329 PSAPP07602 524 aa17.09■□□□□ 0.33
CLN6-219ENST00000637329 UBA1P22314 1058 aaKnown RBP17.09■□□□□ 0.33
CLN6-219ENST00000637329 PSMC5P62195 406 aa17.09■□□□□ 0.33
CLN6-219ENST00000637329 EHHADHQ08426 723 aa17.09■□□□□ 0.33
CLN6-219ENST00000637329 IRF5Q13568 498 aa17.09■□□□□ 0.33
CLN6-219ENST00000637329 CTTNQ14247 550 aaKnown RBP17.09■□□□□ 0.33
CLN6-219ENST00000637329 NEDD9Q14511 834 aa17.09■□□□□ 0.33
CLN6-219ENST00000637329 DHX8Q14562 1220 aaKnown RBP17.09■□□□□ 0.33
CLN6-219ENST00000637329 SARM1Q6SZW1 724 aa17.09■□□□□ 0.33
CLN6-219ENST00000637329 C17orf99Q6UX52 265 aa17.09■□□□□ 0.33
CLN6-219ENST00000637329 CTU1Q7Z7A3 348 aaKnown RBP17.09■□□□□ 0.33
CLN6-219ENST00000637329 CCDC65Q8IXS2 484 aa17.09■□□□□ 0.33
CLN6-219ENST00000637329 C4orf19Q8IY42 314 aa17.09■□□□□ 0.33
CLN6-219ENST00000637329 MSL3Q8N5Y2 521 aaKnown RBP17.09■□□□□ 0.33
CLN6-219ENST00000637329 ENOX1Q8TC92 643 aaKnown RBP17.09■□□□□ 0.33
CLN6-219ENST00000637329 ATP6V0A1Q93050 837 aa17.09■□□□□ 0.33
CLN6-219ENST00000637329 BHMT2Q9H2M3 363 aa17.09■□□□□ 0.33
CLN6-219ENST00000637329 VTA1Q9NP79 307 aa17.09■□□□□ 0.33
CLN6-219ENST00000637329 DBR1Q9UK59 544 aaKnown RBP17.09■□□□□ 0.33
CLN6-219ENST00000637329 IGSF9BQ9UPX0 1349 aa17.08■□□□□ 0.32
CLN6-219ENST00000637329 PPP1R3GB7ZBB8 358 aa17.08■□□□□ 0.32
CLN6-219ENST00000637329 NCAPHQ15003 741 aa17.08■□□□□ 0.32
CLN6-219ENST00000637329 MIS18BP1Q6P0N0 1132 aa17.08■□□□□ 0.32
CLN6-219ENST00000637329 MAMDC4Q6UXC1 1216 aa17.08■□□□□ 0.32
CLN6-219ENST00000637329 BANK1Q8NDB2 785 aa17.08■□□□□ 0.32
CLN6-219ENST00000637329 PDLIM2Q96JY6 352 aa17.08■□□□□ 0.32
CLN6-219ENST00000637329 CPA4Q9UI42 421 aa17.08■□□□□ 0.32
CLN6-219ENST00000637329 SYNGAP1Q96PV0 1343 aa17.07■□□□□ 0.32
CLN6-219ENST00000637329 PSMA7O14818 248 aa17.07■□□□□ 0.32
CLN6-219ENST00000637329 KRT18P05783 430 aaKnown RBP17.07■□□□□ 0.32
CLN6-219ENST00000637329 ACTR2P61160 394 aa17.07■□□□□ 0.32
CLN6-219ENST00000637329 PSMC6P62333 389 aa17.07■□□□□ 0.32
CLN6-219ENST00000637329 COASYQ13057 564 aa17.07■□□□□ 0.32
CLN6-219ENST00000637329 PAK1Q13153 545 aa17.07■□□□□ 0.32
CLN6-219ENST00000637329 PKN2Q16513 984 aaKnown RBP17.07■□□□□ 0.32
CLN6-219ENST00000637329 METTL7BQ6UX53 244 aa17.07■□□□□ 0.32
CLN6-219ENST00000637329 SEPT14Q6ZU15 432 aa17.07■□□□□ 0.32
CLN6-219ENST00000637329 ARMCX2Q7L311 632 aa17.07■□□□□ 0.32
CLN6-219ENST00000637329 DYMQ7RTS9 669 aa17.07■□□□□ 0.32
CLN6-219ENST00000637329 ADSSL1Q8N142 457 aa17.07■□□□□ 0.32
CLN6-219ENST00000637329 TIPINQ9BVW5 301 aa17.07■□□□□ 0.32
CLN6-219ENST00000637329 WRAP73Q9P2S5 460 aaPredicted RBP17.07■□□□□ 0.32
CLN6-219ENST00000637329 RWDD2AQ9UIY3 292 aa17.07■□□□□ 0.32
CLN6-219ENST00000637329 ODF2LQ9ULJ1 636 aa17.07■□□□□ 0.32
CLN6-219ENST00000637329 ZNFX1Q9P2E3 1918 aaKnown RBP17.06■□□□□ 0.32
CLN6-219ENST00000637329 ARHGEF35A5YM69 484 aa17.06■□□□□ 0.32
CLN6-219ENST00000637329 COBLO75128 1261 aa17.06■□□□□ 0.32
CLN6-219ENST00000637329 TBCAO75347 108 aaKnown RBP17.06■□□□□ 0.32
CLN6-219ENST00000637329 FARP2O94887 1054 aaPredicted RBP17.06■□□□□ 0.32
CLN6-219ENST00000637329 ATG7O95352 703 aa17.06■□□□□ 0.32
CLN6-219ENST00000637329 SUPT20HL2P0C7V6 817 aa17.06■□□□□ 0.32
CLN6-219ENST00000637329 CD44P16070 742 aaKnown RBP17.06■□□□□ 0.32
CLN6-219ENST00000637329 GAP43P17677 238 aa17.06■□□□□ 0.32
CLN6-219ENST00000637329 GUCY2CP25092 1073 aa17.06■□□□□ 0.32
CLN6-219ENST00000637329 ARSHQ5FYA8 562 aa17.06■□□□□ 0.32
CLN6-219ENST00000637329 MORN1Q5T089 497 aa17.06■□□□□ 0.32
CLN6-219ENST00000637329 FOXR2Q6PJQ5 311 aa17.06■□□□□ 0.32
CLN6-219ENST00000637329 ABHD15Q6UXT9 468 aa17.06■□□□□ 0.32
CLN6-219ENST00000637329 SMYD4Q8IYR2 804 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms