RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-225	ENST00000636861	PAEP	P09466	180 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	LINGO3	P0C6S8	592 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	MYZAP	P0CAP1	466 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	FAM200B	P0CF97	657 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	TCP1	P17987	556 aa	Known RBP	4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	ATP6V1C1	P21283	382 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	EIF4B	P23588	611 aa	Known RBP	4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	PAX3	P23760	479 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	DSG3	P32926	999 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	PCK1	P35558	622 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	CYLC1	P35663	651 aa	Predicted RBP	4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	SKIV2L2	P42285	1042 aa	Known RBP	4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	PAFAH1B1	P43034	410 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	GNAQ	P50148	359 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	HDLBP	Q00341	1268 aa	Known RBP	4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	PDE1B	Q01064	536 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	MPP3	Q13368	585 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	SNX1	Q13596	522 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	SPIDR	Q14159	915 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	ZNF268	Q14587	947 aa	Predicted RBP	4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	NFE2L2	Q16236	605 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	GSTA3	Q16772	222 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	INF2	Q27J81	1249 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	ANKRD20A2	Q5SQ80	823 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	ZMYM1	Q5SVZ6	1142 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	ANKRD20A1	Q5TYW2	823 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	AGBL2	Q5U5Z8	902 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	SFMBT2	Q5VUG0	894 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	ANKRD20A3	Q5VUR7	823 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	ZNF280D	Q6N043	979 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	KANK3	Q6NY19	840 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	CPLX4	Q7Z7G2	160 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	FERMT3	Q86UX7	667 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	MICALL2	Q8IY33	904 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	RTKN2	Q8IZC4	609 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	FMR1NB	Q8N0W7	255 aa	Predicted RBP	4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	SLC35F6	Q8N357	371 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	NME8	Q8N427	588 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	MMGT1	Q8N4V1	131 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	RNF10	Q8N5U6	811 aa	Known RBP	4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	MLKL	Q8NB16	471 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	ZNF280C	Q8ND82	737 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	ENGASE	Q8NFI3	743 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	IFT81	Q8WYA0	676 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	IRGQ	Q8WZA9	623 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	KIFAP3	Q92845	792 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	STAMBPL1	Q96FJ0	436 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	MASTL	Q96GX5	879 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	PGBD1	Q96JS3	809 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	ATP6V1G3	Q96LB4	118 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	CATSPER2	Q96P56	530 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	PTPN18	Q99952	460 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	ARPC5L	Q9BPX5	153 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	SLX1A	Q9BQ83	275 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	NUP58	Q9BVL2	599 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	LSG1	Q9H089	658 aa	Known RBP	4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	PCDH18	Q9HCL0	1135 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	LZTFL1	Q9NQ48	299 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	PLCB1	Q9NQ66	1216 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	RMND1	Q9NWS8	449 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	AATF	Q9NY61	560 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	CNOT7	Q9UIV1	285 aa	Known RBP	4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	SCAF8	Q9UPN6	1271 aa	Known RBP	4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	TMEM98	Q9Y2Y6	226 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	SH3GLB1	Q9Y371	365 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	C2CD2	Q9Y426	696 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	ASB3	Q9Y575	518 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	ADGRG1	Q9Y653	693 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	GBF1	Q92538	1859 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	PFAS	O15067	1338 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	PCDH11X	Q9BZA7	1347 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	PCDH11Y	Q9BZA8	1340 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	RFX7	Q2KHR2	1363 aa		4.4	□□□□□ -1.71
CHD2-225	ENST00000636861	MAGEA13P	A6NCF6	341 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	AGPS	O00116	658 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861		O00370	1275 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	CETN3	O15182	167 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	ASAP2	O43150	1006 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	TRAPPC3	O43617	180 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	KDM1A	O60341	852 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	HNRNPCL1	O60812	293 aa	Known RBP	4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	DIAPH2	O60879	1101 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	MFAP3L	O75121	409 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	FAM163B	P0C2L3	166 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	PRLR	P16471	622 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	CYP11B2	P19099	503 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	IBSP	P21815	317 aa	Predicted RBP	4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	FECH	P22830	423 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	RPS6KB1	P23443	525 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	SMARCA1	P28370	1054 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	KRT9	P35527	623 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	TRPC1	P48995	793 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	PHEX	P78562	749 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	ZBED6	P86452	979 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	AMPD2	Q01433	879 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	PTPN12	Q05209	780 aa	Known RBP	4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	SULT2A1	Q06520	285 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	CBX3	Q13185	183 aa		4.39	□□□□□ -1.71
CHD2-225	ENST00000636861	BYSL	Q13895	437 aa	Known RBP	4.39	□□□□□ -1.71

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