RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 SEPT2Q15019 361 aa15.4■□□□□ 0.06
CACNA1A-228ENST00000636610 RBM17Q96I25 401 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-228ENST00000636610 GYS1P13807 737 aa15.4■□□□□ 0.06
CACNA1A-228ENST00000636610 MKRN4PQ13434 485 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-228ENST00000636610 CDC37Q16543 378 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-228ENST00000636610 SLC18A3Q16572 532 aa15.4■□□□□ 0.06
CACNA1A-228ENST00000636610 TRIM59Q8IWR1 403 aa15.4■□□□□ 0.06
CACNA1A-228ENST00000636610 TAF4BQ92750 862 aa15.4■□□□□ 0.06
CACNA1A-228ENST00000636610 PKD2L1Q9P0L9 805 aa15.4■□□□□ 0.06
CACNA1A-228ENST00000636610 PCNTO95613 3336 aa15.39■□□□□ 0.05
CACNA1A-228ENST00000636610 ZC2HC1CQ53FD0 456 aaPredicted RBP15.39■□□□□ 0.05
CACNA1A-228ENST00000636610 ARMCX3Q9UH62 379 aaPredicted RBP15.39■□□□□ 0.05
CACNA1A-228ENST00000636610 USP21Q9UK80 565 aa15.39■□□□□ 0.05
CACNA1A-228ENST00000636610 ZNF233A6NK53 670 aa15.39■□□□□ 0.05
CACNA1A-228ENST00000636610 AKAP3O75969 853 aa15.39■□□□□ 0.05
CACNA1A-228ENST00000636610 ITGA4P13612 1032 aa15.39■□□□□ 0.05
CACNA1A-228ENST00000636610 ZNF76P36508 570 aa15.39■□□□□ 0.05
CACNA1A-228ENST00000636610 GABPAQ06546 454 aa15.39■□□□□ 0.05
CACNA1A-228ENST00000636610 CTTNQ14247 550 aaKnown RBP15.39■□□□□ 0.05
CACNA1A-228ENST00000636610 NAB2Q15742 525 aa15.39■□□□□ 0.05
CACNA1A-228ENST00000636610 CEP85LQ5SZL2 805 aa15.39■□□□□ 0.05
CACNA1A-228ENST00000636610 SLF2Q8IX21 1173 aa15.39■□□□□ 0.05
CACNA1A-228ENST00000636610 IFT20Q8IY31 132 aa15.39■□□□□ 0.05
CACNA1A-228ENST00000636610 SH2D3AQ9BRG2 576 aa15.39■□□□□ 0.05
CACNA1A-228ENST00000636610 DDX60LQ5H9U9 1706 aaKnown RBP15.39■□□□□ 0.05
CACNA1A-228ENST00000636610 DDTLA6NHG4 134 aaPredicted RBP15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 FAM86B1E9PN63 330 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 NDUFAB1O14561 156 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 GFPT2O94808 682 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 FAM86B2P0C5J1 330 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 DDR1Q08345 913 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 RPS6KA1Q15418 735 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 SLFN13Q68D06 897 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 PPP4R3AQ6IN85 833 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 RBM46Q8TBY0 533 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 U2AF1L4Q8WU68 220 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 DHX36Q9H2U1 1008 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 KCTD10Q9H3F6 313 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 LCA5LO95447 670 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 UCHL3P15374 230 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 COG2Q14746 738 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 EXOC3L4Q17RC7 722 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 MSL3Q8N5Y2 521 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 RNPC3Q96LT9 517 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 CELF4Q9BZC1 486 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 DPH5Q9H2P9 285 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 DNAJC18Q9H819 358 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 PCDHA2Q9Y5H9 948 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 EBAG9O00559 213 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 ARHGAP4P98171 946 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 PPFIA1Q13136 1202 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 ZYXQ15942 572 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 ALKBH5Q6P6C2 394 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 RUSC1Q9BVN2 902 aa15.38■□□□□ 0.05
CACNA1A-228ENST00000636610 SSU72P8A0A1W2PR75 194 aa15.37■□□□□ 0.05
CACNA1A-228ENST00000636610 PJA2O43164 708 aa15.37■□□□□ 0.05
CACNA1A-228ENST00000636610 NMT1P30419 496 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-228ENST00000636610 HOXD13P35453 343 aa15.37■□□□□ 0.05
CACNA1A-228ENST00000636610 PDE4CQ08493 712 aa15.37■□□□□ 0.05
CACNA1A-228ENST00000636610 PSMD2Q13200 908 aa15.37■□□□□ 0.05
CACNA1A-228ENST00000636610 TPH2Q8IWU9 490 aa15.37■□□□□ 0.05
CACNA1A-228ENST00000636610 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.37■□□□□ 0.05
CACNA1A-228ENST00000636610 AMACRQ9UHK6 382 aa15.37■□□□□ 0.05
CACNA1A-228ENST00000636610 FAM169AQ9Y6X4 670 aa15.37■□□□□ 0.05
CACNA1A-228ENST00000636610 GAKO14976 1311 aa15.37■□□□□ 0.05
CACNA1A-228ENST00000636610 OPA1O60313 960 aa15.37■□□□□ 0.05
CACNA1A-228ENST00000636610 IBSPP21815 317 aaPredicted RBP15.37■□□□□ 0.05
CACNA1A-228ENST00000636610 FLT3P36888 993 aa15.37■□□□□ 0.05
CACNA1A-228ENST00000636610 NT5C3AQ9H0P0 336 aa15.37■□□□□ 0.05
CACNA1A-228ENST00000636610 PPANQ9NQ55 473 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-228ENST00000636610 DNM3Q9UQ16 869 aa15.37■□□□□ 0.05
CACNA1A-228ENST00000636610 GRIN2DO15399 1336 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 HLA-DOAP06340 250 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 SNHG28P0DPA3 235 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 XRCC5P13010 732 aaKnown RBP15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 CLK2P49760 499 aaKnown RBP15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 GIT2Q14161 759 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 TTC31Q49AM3 519 aaPredicted RBP15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 FBXW10Q5XX13 1052 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 TBC1D22AQ8WUA7 517 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 ELMO3Q96BJ8 720 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 LRRC27Q9C0I9 530 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 OSGEPQ9NPF4 335 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 GCNT4Q9P109 453 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 PLAAQ9Y263 795 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 DDX39AO00148 427 aaKnown RBP15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 PON1P27169 355 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 CYP2J2P51589 502 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 CORO7P57737 925 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 ERVK-9P63128 1117 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 ARHGAP44Q17R89 818 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 MEI1Q5TIA1 1274 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 MSL1Q68DK7 614 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 EMBQ6PCB8 327 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 DAAM2Q86T65 1068 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 PROM2Q8N271 834 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 GANQ9H2C0 597 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 NAV1Q8NEY1 1877 aa15.36■□□□□ 0.05
CACNA1A-228ENST00000636610 SHTN1A0MZ66 631 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 UBAP1LF5GYI3 381 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms