RNA–Protein interactions for RNA: ENST00000636559.1

SMARCA2-252, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2 BASIC

Gene SMARCA2, Length 6,853 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-252ENST00000636559 ZC3H13Q5T200 1668 aaKnown RBP8.4□□□□□ -1.07
SMARCA2-252ENST00000636559 NEDD9Q14511 834 aa8.4□□□□□ -1.07
SMARCA2-252ENST00000636559 C10orf76Q5T2E6 689 aa8.4□□□□□ -1.07
SMARCA2-252ENST00000636559 MAGOHBQ96A72 148 aaKnown RBP8.4□□□□□ -1.07
SMARCA2-252ENST00000636559 FAM167AQ96KS9 214 aa8.4□□□□□ -1.07
SMARCA2-252ENST00000636559 TMEM260Q9NX78 707 aa8.4□□□□□ -1.07
SMARCA2-252ENST00000636559 EIF3CLB5ME19 914 aaKnown RBP8.4□□□□□ -1.07
SMARCA2-252ENST00000636559 CD58P19256 250 aa8.4□□□□□ -1.07
SMARCA2-252ENST00000636559 GUCY2DQ02846 1103 aa8.4□□□□□ -1.07
SMARCA2-252ENST00000636559 DNAJC24Q6P3W2 148 aa8.4□□□□□ -1.07
SMARCA2-252ENST00000636559 LINC00116Q8NCU8 138 aa8.4□□□□□ -1.07
SMARCA2-252ENST00000636559 NSUN4Q96CB9 384 aaKnown RBP8.4□□□□□ -1.07
SMARCA2-252ENST00000636559 EIF3CQ99613 913 aaKnown RBP8.4□□□□□ -1.07
SMARCA2-252ENST00000636559 NHEJ1Q9H9Q4 299 aaPredicted RBP8.4□□□□□ -1.07
SMARCA2-252ENST00000636559 ATP6V0A4Q9HBG4 840 aa8.4□□□□□ -1.07
SMARCA2-252ENST00000636559 PTPN22Q9Y2R2 807 aa8.4□□□□□ -1.07
SMARCA2-252ENST00000636559 LDHAP00338 332 aaKnown RBP8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 EIF4A3P38919 411 aaKnown RBP8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 ORC2Q13416 577 aaPredicted RBP8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 PRPSAP1Q14558 356 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 MARCH10Q8NA82 808 aaPredicted RBP8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 PRPF38AQ8NAV1 312 aaKnown RBP8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 MCPH1Q8NEM0 835 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 NEDD1Q8NHV4 660 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 FAM49AQ9H0Q0 323 aaPredicted RBP8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 HOMER3Q9NSC5 361 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 SGK1O00141 431 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 MYL3P08590 195 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 QRICH1Q2TAL8 776 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 PRR5LQ6MZQ0 368 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 KIAA1841Q6NSI8 718 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 MCUR1Q96AQ8 359 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 SLC38A10Q9HBR0 1119 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 MKRN1Q9UHC7 482 aaKnown RBP8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 KRT76Q01546 638 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 KRT31Q15323 416 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 GDAQ9Y2T3 454 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 MAD1L1Q9Y6D9 718 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 RIMBP3CA6NJZ7 1639 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 RIMBP3BA6NNM3 1639 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 RIMBP3Q9UFD9 1639 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 CCDC160A6NGH7 325 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 SOWAHDA6NJG2 315 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 SPDYE16A6NNV3 312 aaPredicted RBP8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 RNF40O75150 1001 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 PPFIA4O75335 1185 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 SPDYE2Q495Y8 402 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 TTC31Q49AM3 519 aaPredicted RBP8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 C12orf60Q5U649 245 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 SGMS1Q86VZ5 419 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 MB21D1Q8N884 522 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 RAD54LQ92698 747 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 RILPQ96NA2 401 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 LRRC4Q9HBW1 653 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 PRKAG2Q9UGJ0 569 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 CPS1P31327 1500 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 GOLGA8KD6RF30 607 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 PFDN6O15212 129 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 AKR1B1P15121 316 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 ANKRD20A3Q5VUR7 823 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 POTEDQ86YR6 584 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 ALDH8A1Q9H2A2 487 aaPredicted RBP8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 CD163L1Q9NR16 1453 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 ATP8B3O60423 1300 aa8.39□□□□□ -1.07
SMARCA2-252ENST00000636559 FRMPD1Q5SYB0 1578 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 TYW5A2RUC4 315 aaKnown RBP8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 PADI6Q6TGC4 694 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 BARGINQ6ZT62 677 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 CATSPER4Q7RTX7 472 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 ACRBPQ8NEB7 543 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 TROVE2P10155 538 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 STRIP1Q5VSL9 837 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 SCARA5Q6ZMJ2 495 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 PPP4R1Q8TF05 950 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 HEXIM2Q96MH2 286 aaKnown RBP8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 AGLP35573 1532 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 UHMK1Q8TAS1 419 aaKnown RBP8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 ARHGEF2Q92974 986 aaKnown RBP8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 OTUD5Q96G74 571 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 DYDC2Q96IM9 177 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 PANX2Q96RD6 677 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 ZNRF3Q9ULT6 936 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 KRT1P04264 644 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 CSF1RP07333 972 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 GNAT1P11488 350 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 SFNP31947 248 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 INPP5BP32019 993 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 SF3A3Q12874 501 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 SFR1Q86XK3 245 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 C10orf67Q8IYJ2 551 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 ARHGAP24Q8N264 748 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 NEK9Q8TD19 979 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 CCDC68Q9H2F9 335 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 PCDHA13Q9Y5I0 950 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 PGRMC1O00264 195 aaKnown RBP8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 NDUFA10O95299 355 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 MOCS3O95396 460 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 MYCP01106 439 aaPredicted RBP8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 FDX1P10109 184 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms