RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 EPHB2P29323 1055 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 TXLNAP40222 546 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 SCNN1DP51172 638 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF84P51523 738 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 ERVK-21P61565 698 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 EXOSC10Q01780 885 aaKnown RBP-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 SLC10A2Q12908 348 aaPredicted RBP-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 TOB2Q14106 344 aaPredicted RBP-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 NR1I3Q14994 352 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 DGKDQ16760 1214 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 IQCCQ4KMZ1 466 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 TIGD2Q4W5G0 525 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 ESCO1Q5FWF5 840 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 PRAMEF18Q5VWM3 479 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 LIPKQ5VXJ0 399 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 KRT79Q5XKE5 535 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 NSUN5P2Q63ZY6 315 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 CEP135Q66GS9 1140 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 SLC2A7Q6PXP3 512 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 KYAT3Q6YP21 454 aaKnown RBP-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 MEX3BQ6ZN04 569 aaKnown RBP-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 FRRS1Q6ZNA5 592 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF662Q6ZS27 426 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 KRT25Q7Z3Z0 450 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 SEPT12Q8IYM1 358 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 SMYD4Q8IYR2 804 aaPredicted RBP-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 CMTR2Q8IYT2 770 aaKnown RBP-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 GJD3Q8N144 294 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 KLHL34Q8N239 644 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 NANOGP1Q8N7R0 232 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 MDGA1Q8NFP4 955 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 ADAMTS18Q8TE60 1221 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 NUDCD2Q8WVJ2 157 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 GPKOWQ92917 476 aaPredicted RBP eCLIP-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF689Q96CS4 500 aaPredicted RBP-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 COQ10AQ96MF6 247 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 NSUN5Q96P11 429 aaKnown RBP-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 SH2D3AQ9BRG2 576 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 TMEM204Q9BSN7 226 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 ZC3H12CQ9C0D7 883 aaKnown RBP-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 CCSER1Q9C0I3 900 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 KIAA1683Q9H0B3 1180 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 SERHL2Q9H4I8 314 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 OSBPL3Q9H4L5 887 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 KCNMB3Q9NPA1 279 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 RAD18Q9NS91 495 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 SYBUQ9NX95 663 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 NCKIPSDQ9NZQ3 722 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 OGFRQ9NZT2 677 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 ZFATQ9P243 1243 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 ARPP21Q9UBL0 812 aaPredicted RBP-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 EBF1Q9UH73 591 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 TRPS1Q9UHF7 1281 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 KCNG2Q9UJ96 466 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 MED16Q9Y2X0 877 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 GPSM3Q9Y4H4 160 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 RYR2Q92736 4967 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 COL5A2P05997 1499 aaPredicted RBP-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 CACNA1GO43497 2377 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 TPRP12270 2363 aaKnown RBP-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 ZANQ9Y493 2812 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 HIVEP3Q5T1R4 2406 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 FAM208BQ5VWN6 2430 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 HIVEP1P15822 2718 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 ARPC4-TTLL3A0A0A6YYG9 625 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 ZBTB7CA1YPR0 619 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 SRRM4A7MD48 611 aaKnown RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 KRTAP16-1A8MUX0 517 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 WASH4PA8MWX3 477 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 H3BNX3 289 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 ASAP2O43150 1006 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 AIREO43918 545 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 RNGTTO60942 597 aaKnown RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 USP2O75604 605 aaPredicted RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 TCEA3O75764 348 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 IGKV1-17P01599 117 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 CD5P06127 495 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 IGKV4-1P06312 121 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 CGB7P0DN87 165 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 PTPRAP18433 802 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 MSX2P35548 267 aaPredicted RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 SCTRP47872 440 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 ZFP36L2P47974 494 aaKnown RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 PHC1P78364 1004 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 FGD1P98174 961 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 POU5F1BQ06416 359 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 VAC14Q08AM6 782 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 RIGQ13278 110 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 IRF5Q13568 498 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 LAPTM5Q13571 262 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 CNGB1Q14028 1251 aaPredicted RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 KEAP1Q14145 624 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 UBXN2BQ14CS0 331 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 SF1Q15637 639 aaKnown RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF423Q2M1K9 1284 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 GAB4Q2WGN9 574 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 FHL5Q5TD97 284 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 RNF20Q5VTR2 975 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 PPP2R2DQ66LE6 453 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 HGSNATQ68CP4 663 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms