RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 DDX41Q9UJV9 622 aaKnown RBP6.8□□□□□ -1.32
GABRB3-218ENST00000635994 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.8□□□□□ -1.32
GABRB3-218ENST00000635994 SETD1BQ9UPS6 1966 aaKnown RBP6.8□□□□□ -1.32
GABRB3-218ENST00000635994 MED23Q9ULK4 1368 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 LRRIQ3A6PVS8 624 aaPredicted RBP6.8□□□□□ -1.32
GABRB3-218ENST00000635994 ABCB4P21439 1286 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 SCNN1DP51172 638 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 PSMD2Q13200 908 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 STXBP2Q15833 593 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 Q3C1V9 767 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 TEDDM1Q5T9Z0 273 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 BTBD8Q5XKL5 378 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 TRIM67Q6ZTA4 783 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 NEK9Q8TD19 979 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 ASIC4Q96FT7 647 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 RNF14Q9UBS8 474 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 G3BP2Q9UN86 482 aaKnown RBP6.8□□□□□ -1.32
GABRB3-218ENST00000635994 KRT87PA6NCN2 255 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 KCNJ18B7U540 433 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 E9PMD0 336 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 AP3B1O00203 1094 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 LUC7L3O95232 432 aaKnown RBP6.8□□□□□ -1.32
GABRB3-218ENST00000635994 MAPK4P31152 587 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 MSH2P43246 934 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 IL1RL1Q01638 556 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 KCNJ12Q14500 433 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 ZNF667Q5HYK9 610 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 FAM47AQ5JRC9 791 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 SPOPLQ6IQ16 392 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 PPP4R3CPQ6ZMV5 832 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 RNF168Q8IYW5 571 aaPredicted RBP6.8□□□□□ -1.32
GABRB3-218ENST00000635994 TMCO5AQ8N6Q1 288 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 TTC13Q8NBP0 860 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 IFT43Q96FT9 208 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 DHTKD1Q96HY7 919 aaPredicted RBP6.8□□□□□ -1.32
GABRB3-218ENST00000635994 ASPSCR1Q9BZE9 553 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 KDM4CQ9H3R0 1056 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 SMYD2Q9NRG4 433 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 ZMYM6O95789 1325 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 SGK1O00141 431 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 KCNK3O14649 394 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 ZW10O43264 779 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 CIAO1O76071 339 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 ADRA2BP18089 450 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 BRD3Q15059 726 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 TTC19Q6DKK2 380 aaPredicted RBP6.8□□□□□ -1.32
GABRB3-218ENST00000635994 HAUS6Q7Z4H7 955 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 PCGF5Q86SE9 256 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 LRRC47Q8N1G4 583 aaKnown RBP6.8□□□□□ -1.32
GABRB3-218ENST00000635994 ANKRD42Q8N9B4 389 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 PI4K2BQ8TCG2 481 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 POLR3CQ9BUI4 534 aaPredicted RBP6.8□□□□□ -1.32
GABRB3-218ENST00000635994 AAASQ9NRG9 546 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 KRT82Q9NSB4 513 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 FGFR1OP2Q9NVK5 253 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 VPS54Q9P1Q0 977 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 MAPK8IP1Q9UQF2 711 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 SLC4A7Q9Y6M7 1214 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 UBXN8O00124 270 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 STXBP3O00186 592 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 SYF2O95926 243 aaKnown RBP6.8□□□□□ -1.32
GABRB3-218ENST00000635994 USP17L8P0C7I0 530 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 PHKG2P15735 406 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 TECP42680 631 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 MAP3K10Q02779 954 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 MECOMQ03112 1051 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 NFX1Q12986 1120 aaKnown RBP6.8□□□□□ -1.32
GABRB3-218ENST00000635994 AP3B2Q13367 1082 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 SNX17Q15036 470 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 UBE2Q2Q8WVN8 375 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 ULK4Q96C45 1275 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 PGBD4Q96DM1 585 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 CFAP36Q96G28 342 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 MRFAP1L1Q96HT8 127 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 NR1H4Q96RI1 486 aaPredicted RBP6.8□□□□□ -1.32
GABRB3-218ENST00000635994 KATNAL1Q9BW62 490 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 OGFRQ9NZT2 677 aa6.8□□□□□ -1.32
GABRB3-218ENST00000635994 AATKQ6ZMQ8 1374 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 ADAMTS13Q76LX8 1427 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 IGSF3O75054 1194 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 AFPP02771 609 aaKnown RBP6.79□□□□□ -1.32
GABRB3-218ENST00000635994 CHRNDQ07001 517 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 CUL1Q13616 776 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 USPL1Q5W0Q7 1092 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 ITPRIPL1Q6GPH6 555 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 TMEM179Q6ZVK1 233 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 ZNF526Q8TF50 670 aaPredicted RBP6.79□□□□□ -1.32
GABRB3-218ENST00000635994 CEP19Q96LK0 163 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 ZNF560Q96MR9 790 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 EVA1BQ9NVM1 165 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 DPP7Q9UHL4 492 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 TNKSO95271 1327 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 PRR36Q9H6K5 1346 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 NEXMIFQ5QGS0 1516 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 AP3M2P53677 418 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 YWHAHQ04917 246 aaPredicted RBP6.79□□□□□ -1.32
GABRB3-218ENST00000635994 MORC3Q14149 939 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 IRAK1BP1Q5VVH5 260 aa6.79□□□□□ -1.32
GABRB3-218ENST00000635994 DARS2Q6PI48 645 aaKnown RBP6.79□□□□□ -1.32
GABRB3-218ENST00000635994 RRM2BQ7LG56 351 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms