RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 SMCO2A6NFE2 343 aa17.24■□□□□ 0.35
CLN8-209ENST00000635970 AKR1B15C9JRZ8 316 aaPredicted RBP17.24■□□□□ 0.35
CLN8-209ENST00000635970 EIF2AK2P19525 551 aaKnown RBP17.24■□□□□ 0.35
CLN8-209ENST00000635970 BMP6P22004 513 aa17.24■□□□□ 0.35
CLN8-209ENST00000635970 SPATA20Q8TB22 786 aa17.24■□□□□ 0.35
CLN8-209ENST00000635970 CTAGE1Q96RT6 745 aa17.24■□□□□ 0.35
CLN8-209ENST00000635970 RMDN3Q96TC7 470 aa17.24■□□□□ 0.35
CLN8-209ENST00000635970 FUT8Q9BYC5 575 aa17.24■□□□□ 0.35
CLN8-209ENST00000635970 ADD3Q9UEY8 706 aaKnown RBP17.24■□□□□ 0.35
CLN8-209ENST00000635970 MAP2K7O14733 419 aa17.24■□□□□ 0.35
CLN8-209ENST00000635970 SASH3O75995 380 aa17.24■□□□□ 0.35
CLN8-209ENST00000635970 CYBAP13498 195 aa17.24■□□□□ 0.35
CLN8-209ENST00000635970 CCL5P13501 91 aa17.24■□□□□ 0.35
CLN8-209ENST00000635970 ADCY7P51828 1080 aa17.24■□□□□ 0.35
CLN8-209ENST00000635970 EEPD1Q7L9B9 569 aa17.24■□□□□ 0.35
CLN8-209ENST00000635970 SRGAP1Q7Z6B7 1085 aa17.24■□□□□ 0.35
CLN8-209ENST00000635970 CUL5Q93034 780 aa17.24■□□□□ 0.35
CLN8-209ENST00000635970 CCDC51Q96ER9 411 aa17.24■□□□□ 0.35
CLN8-209ENST00000635970 CLIC6Q96NY7 704 aa17.24■□□□□ 0.35
CLN8-209ENST00000635970 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.24■□□□□ 0.35
CLN8-209ENST00000635970 PIK3CDO00329 1044 aa17.23■□□□□ 0.35
CLN8-209ENST00000635970 POLR3GO15318 223 aaPredicted RBP17.23■□□□□ 0.35
CLN8-209ENST00000635970 ERLIN1O75477 346 aa17.23■□□□□ 0.35
CLN8-209ENST00000635970 DNERQ8NFT8 737 aa17.23■□□□□ 0.35
CLN8-209ENST00000635970 MAF1Q9H063 256 aa17.23■□□□□ 0.35
CLN8-209ENST00000635970 RIC8AQ9NPQ8 531 aa17.23■□□□□ 0.35
CLN8-209ENST00000635970 PXMP2Q9NR77 195 aa17.23■□□□□ 0.35
CLN8-209ENST00000635970 MAP3K20Q9NYL2 800 aaKnown RBP17.23■□□□□ 0.35
CLN8-209ENST00000635970 KIF5CO60282 957 aa17.22■□□□□ 0.35
CLN8-209ENST00000635970 SEC31AO94979 1220 aaKnown RBP17.22■□□□□ 0.35
CLN8-209ENST00000635970 MMP1P03956 469 aa17.22■□□□□ 0.35
CLN8-209ENST00000635970 ARHGEF16Q5VV41 709 aa17.22■□□□□ 0.35
CLN8-209ENST00000635970 TOGARAM2Q6ZUX3 1019 aa17.22■□□□□ 0.35
CLN8-209ENST00000635970 FBXO16Q8IX29 292 aaPredicted RBP17.22■□□□□ 0.35
CLN8-209ENST00000635970 IL31RAQ8NI17 732 aa17.22■□□□□ 0.35
CLN8-209ENST00000635970 CCDC12Q8WUD4 166 aaPredicted RBP17.22■□□□□ 0.35
CLN8-209ENST00000635970 KATNBL1Q9H079 304 aa17.22■□□□□ 0.35
CLN8-209ENST00000635970 ZMYND12Q9H0C1 365 aa17.22■□□□□ 0.35
CLN8-209ENST00000635970 RNF208Q9H0X6 261 aa17.22■□□□□ 0.35
CLN8-209ENST00000635970 TMEM260Q9NX78 707 aa17.22■□□□□ 0.35
CLN8-209ENST00000635970 SRPRBQ9Y5M8 271 aaKnown RBP17.22■□□□□ 0.35
CLN8-209ENST00000635970 MYH7BA7E2Y1 1941 aa17.22■□□□□ 0.35
CLN8-209ENST00000635970 ASB14A6NK59 587 aa17.22■□□□□ 0.35
CLN8-209ENST00000635970 CNGA1P29973 690 aa17.22■□□□□ 0.35
CLN8-209ENST00000635970 LONRF2Q1L5Z9 754 aa17.22■□□□□ 0.35
CLN8-209ENST00000635970 FAM177A1Q8N128 213 aaPredicted RBP17.22■□□□□ 0.35
CLN8-209ENST00000635970 GOLGA5Q8TBA6 731 aa17.22■□□□□ 0.35
CLN8-209ENST00000635970 NSUN6Q8TEA1 469 aaKnown RBP17.22■□□□□ 0.35
CLN8-209ENST00000635970 ZFP91Q96JP5 570 aaPredicted RBP17.22■□□□□ 0.35
CLN8-209ENST00000635970 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLN8-209ENST00000635970 FBXO2Q9UK22 296 aaPredicted RBP17.22■□□□□ 0.35
CLN8-209ENST00000635970 RAB21Q9UL25 225 aa17.22■□□□□ 0.35
CLN8-209ENST00000635970 KCNJ14Q9UNX9 436 aa17.22■□□□□ 0.35
CLN8-209ENST00000635970 RPTORQ8N122 1335 aa17.21■□□□□ 0.35
CLN8-209ENST00000635970 EIF3JO75822 258 aaKnown RBP17.21■□□□□ 0.35
CLN8-209ENST00000635970 ZNF865P0CJ78 1059 aaPredicted RBP17.21■□□□□ 0.35
CLN8-209ENST00000635970 EDNRBP24530 442 aa17.21■□□□□ 0.35
CLN8-209ENST00000635970 CHMP4BP1P59074 171 aa17.21■□□□□ 0.35
CLN8-209ENST00000635970 HDXQ7Z353 690 aa17.21■□□□□ 0.35
CLN8-209ENST00000635970 PPFIBP1Q86W92 1011 aa17.21■□□□□ 0.35
CLN8-209ENST00000635970 SAMD3Q8N6K7 520 aa17.21■□□□□ 0.35
CLN8-209ENST00000635970 IQUBQ8NA54 791 aa17.21■□□□□ 0.35
CLN8-209ENST00000635970 CCDC148Q8NFR7 591 aa17.21■□□□□ 0.35
CLN8-209ENST00000635970 RASGRP4Q8TDF6 673 aa17.21■□□□□ 0.35
CLN8-209ENST00000635970 MORC4Q8TE76 937 aa17.21■□□□□ 0.35
CLN8-209ENST00000635970 LENG1Q96BZ8 264 aaPredicted RBP17.21■□□□□ 0.35
CLN8-209ENST00000635970 GBP3Q9H0R5 595 aa17.21■□□□□ 0.35
CLN8-209ENST00000635970 HMX1Q9NP08 348 aaPredicted RBP17.21■□□□□ 0.35
CLN8-209ENST00000635970 MYO1AQ9UBC5 1043 aa17.21■□□□□ 0.35
CLN8-209ENST00000635970 CDC23Q9UJX2 597 aa17.21■□□□□ 0.35
CLN8-209ENST00000635970 ESYT2A0FGR8 921 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 CLK2P49760 499 aaKnown RBP17.2■□□□□ 0.34
CLN8-209ENST00000635970 ADKP55263 362 aaKnown RBP17.2■□□□□ 0.34
CLN8-209ENST00000635970 PGM5Q15124 567 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 MSANTD4Q8NCY6 345 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 BBXQ8WY36 941 aaPredicted RBP17.2■□□□□ 0.34
CLN8-209ENST00000635970 DHX58Q96C10 678 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 PDCD2LQ9BRP1 358 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 PAK6Q9NQU5 681 aaPredicted RBP17.2■□□□□ 0.34
CLN8-209ENST00000635970 FRMPD4Q14CM0 1322 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 KIAA0100Q14667 2235 aaKnown RBP17.2■□□□□ 0.34
CLN8-209ENST00000635970 CCDC85CA6NKD9 419 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 POLR2DO15514 142 aaKnown RBP17.2■□□□□ 0.34
CLN8-209ENST00000635970 ADCY6O43306 1168 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 MRPL12P52815 198 aaKnown RBP17.2■□□□□ 0.34
CLN8-209ENST00000635970 NLRP5P59047 1200 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 PDE4DQ08499 809 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 ACVR2BQ13705 512 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 NPY5RQ15761 445 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 FILIP1LQ4L180 1135 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 SPATA1Q5VX52 437 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 C6orf50Q9HD87 102 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 SH3GLB2Q9NR46 395 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 PDGFCQ9NRA1 345 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 ADGRG1Q9Y653 693 aa17.2■□□□□ 0.34
CLN8-209ENST00000635970 MYCLP12524 364 aaPredicted RBP17.19■□□□□ 0.34
CLN8-209ENST00000635970 FECHP22830 423 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 GOLGA8FQ08AF8 430 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 GOLGA8DPQ0D2H9 430 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 CNGA4Q8IV77 575 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms