RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 JAK3P52333 1124 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 ADAM17P78536 824 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 ZNF200P98182 395 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-210ENST00000635675 PPP2R5CQ13362 524 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 PLCB4Q15147 1175 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 MCTP1Q6DN14 999 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 SWSAP1Q6NVH7 229 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 SLFN12Q8IYM2 578 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 BADQ92934 168 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 MTMR9Q96QG7 549 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 PRO3102Q9H379 93 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 ZNF302Q9NR11 478 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 DISC1Q9NRI5 854 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 SETD4Q9NVD3 440 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 TCEAL9Q9UHQ7 104 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 VAV3Q9UKW4 847 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 MAFBQ9Y5Q3 323 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-210ENST00000635675 TRIP12Q14669 1992 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-210ENST00000635675 WDR81Q562E7 1941 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 C17orf102A2RUQ5 167 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 BACH1O14867 736 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 CHMP2AO43633 222 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 NEMFO60524 1076 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 BAG4O95429 457 aaKnown RBP10.98□□□□□ -0.65
LINC00339-210ENST00000635675 ATP4AP20648 1035 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 SYT1P21579 422 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 MARK3P27448 753 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 HOXD11P31277 338 aaPredicted RBP10.98□□□□□ -0.65
LINC00339-210ENST00000635675 MCM7P33993 719 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 BMP8BP34820 402 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 MDM2Q00987 491 aaPredicted RBP10.98□□□□□ -0.65
LINC00339-210ENST00000635675 SPIRE1Q08AE8 756 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 ORC2Q13416 577 aaPredicted RBP10.98□□□□□ -0.65
LINC00339-210ENST00000635675 ZNF174Q15697 407 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 CALCRLQ16602 461 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 FAM160B1Q5W0V3 765 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 RDM1Q8NG50 284 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 LMBR1Q8WVP7 490 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 LBHD1Q9BQE6 289 aaPredicted RBP10.98□□□□□ -0.65
LINC00339-210ENST00000635675 TMEM60Q9H2L4 133 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 HIPK3Q9H422 1215 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 FOXD4L1Q9NU39 408 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 NOL7Q9UMY1 257 aaKnown RBP10.98□□□□□ -0.65
LINC00339-210ENST00000635675 NOD1Q9Y239 953 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 SAMM50Q9Y512 469 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 UMODL1Q5DID0 1318 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 NRCAMQ92823 1304 aa10.98□□□□□ -0.65
LINC00339-210ENST00000635675 KAT6AQ92794 2004 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 POTEB3A0JP26 581 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 EML1O00423 815 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 TREHO43280 583 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 MARCH6O60337 910 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 GNAT1P11488 350 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 INSRRP14616 1297 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 CYP2C18P33260 490 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 PTK7Q13308 1070 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 GRIK4Q16099 956 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 TTC38Q5R3I4 469 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 MARCH8Q5T0T0 291 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 MFSD5Q6N075 450 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 PDXDC2PQ6P474 469 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 POTEBQ6S5H4 581 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 MIER3Q7Z3K6 550 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 SERINC5Q86VE9 423 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 C4orf32Q8N8J7 132 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 ATP8B4Q8TF62 1192 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 DHX38Q92620 1227 aaKnown RBP10.97□□□□□ -0.65
LINC00339-210ENST00000635675 ATP6V0A1Q93050 837 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 PPP1R12CQ9BZL4 782 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 GABBR1Q9UBS5 961 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 PCDHA12Q9UN75 941 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 MYH9P35579 1960 aaKnown RBP10.97□□□□□ -0.65
LINC00339-210ENST00000635675 IGSF9BQ9UPX0 1349 aa10.97□□□□□ -0.65
LINC00339-210ENST00000635675 MBLAC1A4D2B0 266 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-210ENST00000635675 RRN3P2A6NIE6 340 aa10.96□□□□□ -0.65
LINC00339-210ENST00000635675 PITPNM1O00562 1244 aa10.96□□□□□ -0.65
LINC00339-210ENST00000635675 ZNF862O60290 1169 aa10.96□□□□□ -0.65
LINC00339-210ENST00000635675 RBL2Q08999 1139 aa10.96□□□□□ -0.65
LINC00339-210ENST00000635675 PPFIA1Q13136 1202 aa10.96□□□□□ -0.65
LINC00339-210ENST00000635675 NBR1Q14596 966 aa10.96□□□□□ -0.65
LINC00339-210ENST00000635675 TRIM71Q2Q1W2 868 aaKnown RBP10.96□□□□□ -0.65
LINC00339-210ENST00000635675 RILPL1Q5EBL4 403 aa10.96□□□□□ -0.65
LINC00339-210ENST00000635675 CHRDL2Q6WN34 429 aa10.96□□□□□ -0.65
LINC00339-210ENST00000635675 CAGE1Q8TC20 777 aa10.96□□□□□ -0.65
LINC00339-210ENST00000635675 TNPO1Q92973 898 aaKnown RBP10.96□□□□□ -0.65
LINC00339-210ENST00000635675 WNT8BQ93098 351 aa10.96□□□□□ -0.65
LINC00339-210ENST00000635675 WNT8AQ9H1J5 351 aa10.96□□□□□ -0.65
LINC00339-210ENST00000635675 TTC12Q9H892 705 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-210ENST00000635675 TRPC6Q9Y210 931 aa10.96□□□□□ -0.65
LINC00339-210ENST00000635675 COLQQ9Y215 455 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-210ENST00000635675 PCDHB6Q9Y5E3 794 aa10.96□□□□□ -0.65
LINC00339-210ENST00000635675 VPS37CA5D8V6 355 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-210ENST00000635675 ZBTB42B2RXF5 422 aa10.95□□□□□ -0.66
LINC00339-210ENST00000635675 HBP1O60381 514 aa10.95□□□□□ -0.66
LINC00339-210ENST00000635675 STBD1O95210 358 aa10.95□□□□□ -0.66
LINC00339-210ENST00000635675 CSF2RAP15509 400 aa10.95□□□□□ -0.66
LINC00339-210ENST00000635675 TXKP42681 527 aa10.95□□□□□ -0.66
LINC00339-210ENST00000635675 EPHB4P54760 987 aa10.95□□□□□ -0.66
LINC00339-210ENST00000635675 CCL23P55773 120 aa10.95□□□□□ -0.66
LINC00339-210ENST00000635675 FPGSQ05932 587 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms