RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 RSPH10BP0C881 870 aa17.77■□□□□ 0.43
LINC00339-207ENST00000634712 KRT2P35908 639 aa17.77■□□□□ 0.43
LINC00339-207ENST00000634712 SLC26A2P50443 739 aa17.77■□□□□ 0.43
LINC00339-207ENST00000634712 IGBP1P78318 339 aa17.77■□□□□ 0.43
LINC00339-207ENST00000634712 GRIK4Q16099 956 aa17.77■□□□□ 0.43
LINC00339-207ENST00000634712 TRIM71Q2Q1W2 868 aaKnown RBP17.77■□□□□ 0.43
LINC00339-207ENST00000634712 LETM2Q2VYF4 491 aa17.77■□□□□ 0.43
LINC00339-207ENST00000634712 Q4G0T1 1027 aa17.77■□□□□ 0.43
LINC00339-207ENST00000634712 ZNF697Q5TEC3 545 aa17.77■□□□□ 0.43
LINC00339-207ENST00000634712 RASIP1Q5U651 963 aa17.77■□□□□ 0.43
LINC00339-207ENST00000634712 SWSAP1Q6NVH7 229 aa17.77■□□□□ 0.43
LINC00339-207ENST00000634712 ABHD15Q6UXT9 468 aa17.77■□□□□ 0.43
LINC00339-207ENST00000634712 SMAP1Q8IYB5 467 aaPredicted RBP17.77■□□□□ 0.43
LINC00339-207ENST00000634712 WNT8BQ93098 351 aa17.77■□□□□ 0.43
LINC00339-207ENST00000634712 ZNF302Q9NR11 478 aa17.77■□□□□ 0.43
LINC00339-207ENST00000634712 SZT2Q5T011 3432 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 CYP3A7-CYP3A51PA0A087WV96 503 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 POTEB3A0JP26 581 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 GAS7O60861 476 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 CAND2O75155 1236 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 PSAPP07602 524 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 INSRRP14616 1297 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 CYP3A7P24462 503 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 FOSBP53539 338 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 FAM109BQ6ICB4 259 aaPredicted RBP17.76■□□□□ 0.43
LINC00339-207ENST00000634712 PDXDC2PQ6P474 469 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 POTEBQ6S5H4 581 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 MOXD1Q6UVY6 613 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 PIK3AP1Q6ZUJ8 805 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 RSPH3Q86UC2 560 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 CKAP2LQ8IYA6 745 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 IL27Q8NEV9 243 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 LENG9Q96B70 501 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 RIT2Q99578 217 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 NAP1L4Q99733 375 aaKnown RBP17.76■□□□□ 0.43
LINC00339-207ENST00000634712 LLPHQ9BRT6 129 aaKnown RBP17.76■□□□□ 0.43
LINC00339-207ENST00000634712 TEKT3Q9BXF9 490 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 CXXC1Q9P0U4 656 aaPredicted RBP17.76■□□□□ 0.43
LINC00339-207ENST00000634712 DDX25Q9UHL0 483 aaKnown RBP17.76■□□□□ 0.43
LINC00339-207ENST00000634712 TUBE1Q9UJT0 475 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 PCDHA10Q9Y5I2 948 aa17.76■□□□□ 0.43
LINC00339-207ENST00000634712 SCN5AQ14524 2016 aa17.75■□□□□ 0.43
LINC00339-207ENST00000634712 IGKV6D-21A0A0A0MT36 114 aa17.75■□□□□ 0.43
LINC00339-207ENST00000634712 EDIL3O43854 480 aa17.75■□□□□ 0.43
LINC00339-207ENST00000634712 MARCH6O60337 910 aa17.75■□□□□ 0.43
LINC00339-207ENST00000634712 TDP2O95551 362 aa17.75■□□□□ 0.43
LINC00339-207ENST00000634712 PLCB4Q15147 1175 aa17.75■□□□□ 0.43
LINC00339-207ENST00000634712 LRCH2Q5VUJ6 765 aa17.75■□□□□ 0.43
LINC00339-207ENST00000634712 TAF2Q6P1X5 1199 aa17.75■□□□□ 0.43
LINC00339-207ENST00000634712 Q7L0L9 218 aa17.75■□□□□ 0.43
LINC00339-207ENST00000634712 NEK8Q86SG6 692 aa17.75■□□□□ 0.43
LINC00339-207ENST00000634712 OXER1Q8TDS5 423 aa17.75■□□□□ 0.43
LINC00339-207ENST00000634712 MSRAQ9UJ68 235 aa17.75■□□□□ 0.43
LINC00339-207ENST00000634712 LAMA2P24043 3122 aaKnown RBP17.75■□□□□ 0.43
LINC00339-207ENST00000634712 GRXCR1A8MXD5 290 aa17.74■□□□□ 0.43
LINC00339-207ENST00000634712 WDR64B1ANS9 1081 aa17.74■□□□□ 0.43
LINC00339-207ENST00000634712 ADAM17P78536 824 aa17.74■□□□□ 0.43
LINC00339-207ENST00000634712 SAFBQ15424 915 aaKnown RBP eCLIP17.74■□□□□ 0.43
LINC00339-207ENST00000634712 CNKSR3Q6P9H4 555 aa17.74■□□□□ 0.43
LINC00339-207ENST00000634712 FAM184AQ8NB25 1140 aa17.74■□□□□ 0.43
LINC00339-207ENST00000634712 SLC5A5Q92911 643 aa17.74■□□□□ 0.43
LINC00339-207ENST00000634712 VWCEQ96DN2 955 aa17.74■□□□□ 0.43
LINC00339-207ENST00000634712 CHMP2AO43633 222 aa17.73■□□□□ 0.43
LINC00339-207ENST00000634712 HBP1O60381 514 aa17.73■□□□□ 0.43
LINC00339-207ENST00000634712 CCNT1O60563 726 aaKnown RBP17.73■□□□□ 0.43
LINC00339-207ENST00000634712 NBNO60934 754 aa17.73■□□□□ 0.43
LINC00339-207ENST00000634712 BAIAP3O94812 1187 aa17.73■□□□□ 0.43
LINC00339-207ENST00000634712 CXCL10P02778 98 aa17.73■□□□□ 0.43
LINC00339-207ENST00000634712 MMP1P03956 469 aa17.73■□□□□ 0.43
LINC00339-207ENST00000634712 CTSHP09668 335 aa17.73■□□□□ 0.43
LINC00339-207ENST00000634712 GCFC2P16383 781 aaKnown RBP17.73■□□□□ 0.43
LINC00339-207ENST00000634712 ATP2A2P16615 1042 aaKnown RBP17.73■□□□□ 0.43
LINC00339-207ENST00000634712 SFNP31947 248 aa17.73■□□□□ 0.43
LINC00339-207ENST00000634712 KCNJ6P48051 423 aa17.73■□□□□ 0.43
LINC00339-207ENST00000634712 HMGN5P82970 282 aaKnown RBP17.73■□□□□ 0.43
LINC00339-207ENST00000634712 ST3GAL1Q11201 340 aa17.73■□□□□ 0.43
LINC00339-207ENST00000634712 KRT40Q6A162 431 aa17.73■□□□□ 0.43
LINC00339-207ENST00000634712 CCDC60Q8IWA6 550 aaPredicted RBP17.73■□□□□ 0.43
LINC00339-207ENST00000634712 FAM161BQ96MY7 647 aa17.73■□□□□ 0.43
LINC00339-207ENST00000634712 DISC1Q9NRI5 854 aa17.73■□□□□ 0.43
LINC00339-207ENST00000634712 GABBR1Q9UBS5 961 aa17.73■□□□□ 0.43
LINC00339-207ENST00000634712 TANC1Q9C0D5 1861 aa17.72■□□□□ 0.43
LINC00339-207ENST00000634712 RPLP2P05387 115 aaKnown RBP17.72■□□□□ 0.43
LINC00339-207ENST00000634712 DNAJB2P25686 324 aa17.72■□□□□ 0.43
LINC00339-207ENST00000634712 JAK3P52333 1124 aa17.72■□□□□ 0.43
LINC00339-207ENST00000634712 NR5A1Q13285 461 aa17.72■□□□□ 0.43
LINC00339-207ENST00000634712 IKBKEQ14164 716 aa17.72■□□□□ 0.43
LINC00339-207ENST00000634712 GPNMBQ14956 572 aa17.72■□□□□ 0.43
LINC00339-207ENST00000634712 RAB30Q15771 203 aa17.72■□□□□ 0.43
LINC00339-207ENST00000634712 PPP4R3AQ6IN85 833 aa17.72■□□□□ 0.43
LINC00339-207ENST00000634712 TRAF7Q6Q0C0 670 aa17.72■□□□□ 0.43
LINC00339-207ENST00000634712 RUFY4Q6ZNE9 571 aa17.72■□□□□ 0.43
LINC00339-207ENST00000634712 TRMT1LQ7Z2T5 733 aaKnown RBP17.72■□□□□ 0.43
LINC00339-207ENST00000634712 DIS3L2Q8IYB7 885 aaKnown RBP17.72■□□□□ 0.43
LINC00339-207ENST00000634712 ATP8B4Q8TF62 1192 aa17.72■□□□□ 0.43
LINC00339-207ENST00000634712 DNAJB3Q8WWF6 145 aa17.72■□□□□ 0.43
LINC00339-207ENST00000634712 TIFAQ96CG3 184 aa17.72■□□□□ 0.43
LINC00339-207ENST00000634712 C8orf76Q96K31 380 aa17.72■□□□□ 0.43
LINC00339-207ENST00000634712 MBOAT7Q96N66 472 aa17.72■□□□□ 0.43
LINC00339-207ENST00000634712 MBLAC1A4D2B0 266 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms