RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 MUTP22033 750 aa7.93□□□□□ -1.14
BRCA1-230ENST00000634433 RGS19P49795 217 aa7.93□□□□□ -1.14
BRCA1-230ENST00000634433 RBL2Q08999 1139 aa7.93□□□□□ -1.14
BRCA1-230ENST00000634433 SYCP2LQ5T4T6 812 aa7.93□□□□□ -1.14
BRCA1-230ENST00000634433 TMEM164Q5U3C3 297 aa7.93□□□□□ -1.14
BRCA1-230ENST00000634433 DYMQ7RTS9 669 aa7.93□□□□□ -1.14
BRCA1-230ENST00000634433 KRT26Q7Z3Y9 468 aa7.93□□□□□ -1.14
BRCA1-230ENST00000634433 LDHDQ86WU2 507 aa7.93□□□□□ -1.14
BRCA1-230ENST00000634433 TMTC1Q8IUR5 882 aa7.93□□□□□ -1.14
BRCA1-230ENST00000634433 APOBEC3FQ8IUX4 373 aaKnown RBP7.93□□□□□ -1.14
BRCA1-230ENST00000634433 DUSP9Q99956 384 aaKnown RBP7.93□□□□□ -1.14
BRCA1-230ENST00000634433 NUDT12Q9BQG2 462 aa7.93□□□□□ -1.14
BRCA1-230ENST00000634433 SLF1Q9BQI6 1058 aa7.93□□□□□ -1.14
BRCA1-230ENST00000634433 SLC39A2Q9NP94 309 aa7.93□□□□□ -1.14
BRCA1-230ENST00000634433 PANK4Q9NVE7 773 aa7.93□□□□□ -1.14
BRCA1-230ENST00000634433 RNF181Q9P0P0 153 aa7.93□□□□□ -1.14
BRCA1-230ENST00000634433 GJA3Q9Y6H8 435 aa7.93□□□□□ -1.14
BRCA1-230ENST00000634433 TRIM49BA6NDI0 452 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 USP27XA6NNY8 438 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 OPLAHO14841 1288 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 MFAP3LO75121 409 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 ICAM1P05362 532 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 SSBP05455 408 aaKnown RBP eCLIP7.92□□□□□ -1.14
BRCA1-230ENST00000634433 KRT18P05783 430 aaKnown RBP7.92□□□□□ -1.14
BRCA1-230ENST00000634433 FCER1AP12319 257 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 HOXA13P31271 388 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-230ENST00000634433 MTIF2P46199 727 aaKnown RBP7.92□□□□□ -1.14
BRCA1-230ENST00000634433 ZYXQ15942 572 aaKnown RBP7.92□□□□□ -1.14
BRCA1-230ENST00000634433 LONRF1Q17RB8 773 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 FKBP15Q5T1M5 1219 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 ANKRD40Q6AI12 368 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 NCAPH2Q6IBW4 605 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 IRF2BP1Q8IU81 584 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 TMEM139Q8IV31 216 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 MYOCDQ8IZQ8 938 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 MB21D1Q8N884 522 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 TEPSINQ96N21 525 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 AS3MTQ9HBK9 375 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 ZMIZ1Q9ULJ6 1067 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 FAM86B1E9PN63 330 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 PES1O00541 588 aaKnown RBP7.92□□□□□ -1.14
BRCA1-230ENST00000634433 MSH4O15457 936 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 COBLO75128 1261 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 ZBED4O75132 1171 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 FAM86B2P0C5J1 330 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 RRM1P23921 792 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 PMS1P54277 932 aaKnown RBP7.92□□□□□ -1.14
BRCA1-230ENST00000634433 EHHADHQ08426 723 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 ECM1Q16610 540 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 KIF4BQ2VIQ3 1234 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 FAM26FQ5R3K3 315 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 KCNK18Q7Z418 384 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 GPBP1Q86WP2 473 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 KIAA0895Q8NCT3 520 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 LENG9Q96B70 501 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 DNAJC19Q96DA6 116 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 CNOT6LQ96LI5 555 aaKnown RBP7.92□□□□□ -1.14
BRCA1-230ENST00000634433 TUBGCP2Q9BSJ2 902 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 IER2Q9BTL4 223 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 ACBD3Q9H3P7 528 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 TUFT1Q9NNX1 390 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 HACL1Q9UJ83 578 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 CCPG1Q9ULG6 757 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 PPP2R2CQ9Y2T4 447 aa7.92□□□□□ -1.14
BRCA1-230ENST00000634433 POTEB3A0JP26 581 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 POTECB2RU33 542 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 GNA14O95837 355 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 FAM163BP0C2L3 166 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 LMNB1P20700 586 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 CASP14P31944 242 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 SPIRE1Q08AE8 756 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 TBC1D8BQ0IIM8 1120 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 COASYQ13057 564 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 SYCP1Q15431 976 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 CEP55Q53EZ4 464 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 POTEBQ6S5H4 581 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 CYP26C1Q6V0L0 522 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 MTERF4Q7Z6M4 381 aaKnown RBP7.91□□□□□ -1.14
BRCA1-230ENST00000634433 CATSPER3Q86XQ3 398 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 CDAN1Q8IWY9 1227 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 SYT2Q8N9I0 419 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-230ENST00000634433 ZNF507Q8TCN5 953 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 CPLX3Q8WVH0 158 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 P2RX7Q99572 595 aaKnown RBP7.91□□□□□ -1.14
BRCA1-230ENST00000634433 WDR18Q9BV38 432 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 NOC4LQ9BVI4 516 aaKnown RBP7.91□□□□□ -1.14
BRCA1-230ENST00000634433 WDR11Q9BZH6 1224 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 PPP2R3BQ9Y5P8 575 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 E9PMD0 336 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 MED24O75448 989 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 CCDC175P0C221 793 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 HSD17B4P51659 736 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 SLC12A3P55017 1021 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 ETF1P62495 437 aaKnown RBP7.91□□□□□ -1.14
BRCA1-230ENST00000634433 GOLGA8FQ08AF8 430 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 GOLGA8DPQ0D2H9 430 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 PTPN21Q16825 1174 aa7.91□□□□□ -1.14
BRCA1-230ENST00000634433 TBC1D10BQ4KMP7 808 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-230ENST00000634433 HERC4Q5GLZ8 1057 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-230ENST00000634433 NIPA1Q7RTP0 329 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms