RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 SLU7O95391 586 aaKnown RBP6.15□□□□□ -1.42
NEK3-211ENST00000629912 P4HBP07237 508 aaKnown RBP6.15□□□□□ -1.42
NEK3-211ENST00000629912 MAPTP10636 758 aaKnown RBP6.15□□□□□ -1.42
NEK3-211ENST00000629912 GUCY2CP25092 1073 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 HOXD13P35453 343 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 EPS15P42566 896 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 ZNF131P52739 623 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 RPS6P62753 249 aaKnown RBP6.15□□□□□ -1.42
NEK3-211ENST00000629912 ERVK-24P63145 666 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 MAP3K9P80192 1104 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 ADAM9Q13443 819 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 MTMR2Q13614 643 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 CTTNQ14247 550 aaKnown RBP6.15□□□□□ -1.42
NEK3-211ENST00000629912 MYBPC2Q14324 1141 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 MTF1Q14872 753 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 WDR59Q6PJI9 974 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 RNF207Q6ZRF8 634 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 VSIG10LQ86VR7 867 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 CPXCR1Q8N123 301 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 GLIS3Q8NEA6 775 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 RDM1Q8NG50 284 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.15□□□□□ -1.42
NEK3-211ENST00000629912 RBM46Q8TBY0 533 aaKnown RBP6.15□□□□□ -1.42
NEK3-211ENST00000629912 TRPM4Q8TD43 1214 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 TMEM174Q8WUU8 243 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 SYN2Q92777 582 aaPredicted RBP6.15□□□□□ -1.42
NEK3-211ENST00000629912 ZKSCAN4Q969J2 545 aaPredicted RBP6.15□□□□□ -1.42
NEK3-211ENST00000629912 ERO1AQ96HE7 468 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 WRNIP1Q96S55 665 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 MAP7D2Q96T17 732 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 CHP1Q99653 195 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 SENP7Q9BQF6 1050 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 STRA6Q9BX79 667 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 TANGO6Q9C0B7 1094 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 NUCKS1Q9H1E3 243 aaKnown RBP6.15□□□□□ -1.42
NEK3-211ENST00000629912 ZSWIM4Q9H7M6 989 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 SPON1Q9HCB6 807 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 METTL14Q9HCE5 456 aaKnown RBP6.15□□□□□ -1.42
NEK3-211ENST00000629912 PXMP2Q9NR77 195 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 KCNH7Q9NS40 1196 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 RNF216Q9NWF9 866 aaPredicted RBP6.15□□□□□ -1.42
NEK3-211ENST00000629912 ZNHIT6Q9NWK9 470 aaKnown RBP6.15□□□□□ -1.42
NEK3-211ENST00000629912 MYO1AQ9UBC5 1043 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 DBR1Q9UK59 544 aaKnown RBP6.15□□□□□ -1.42
NEK3-211ENST00000629912 ODF2LQ9ULJ1 636 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 PLAGL2Q9UPG8 496 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 ZHX2Q9Y6X8 837 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 UBE4BO95155 1302 aa6.15□□□□□ -1.43
NEK3-211ENST00000629912 RBBP6Q7Z6E9 1792 aaKnown RBP6.15□□□□□ -1.43
NEK3-211ENST00000629912 COL11A1P12107 1806 aaPredicted RBP6.15□□□□□ -1.43
NEK3-211ENST00000629912 WDR81Q562E7 1941 aa6.15□□□□□ -1.43
NEK3-211ENST00000629912 EIF3CLB5ME19 914 aaKnown RBP6.14□□□□□ -1.43
NEK3-211ENST00000629912 PES1O00541 588 aaKnown RBP6.14□□□□□ -1.43
NEK3-211ENST00000629912 TBCAO75347 108 aaKnown RBP6.14□□□□□ -1.43
NEK3-211ENST00000629912 STAM2O75886 525 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 NDUFA10O95299 355 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 LCA5LO95447 670 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 TRIM21P19474 475 aaKnown RBP6.14□□□□□ -1.43
NEK3-211ENST00000629912 RPL13P26373 211 aaKnown RBP6.14□□□□□ -1.43
NEK3-211ENST00000629912 CASQ1P31415 396 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 CYLC1P35663 651 aaPredicted RBP6.14□□□□□ -1.43
NEK3-211ENST00000629912 QARSP47897 775 aaKnown RBP6.14□□□□□ -1.43
NEK3-211ENST00000629912 MCCD1P59942 119 aaPredicted RBP6.14□□□□□ -1.43
NEK3-211ENST00000629912 GNG11P61952 73 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 UBXN2AP68543 259 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 KRT83P78385 493 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 CYP4A11Q02928 519 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 KCNMA1Q12791 1236 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 BAATQ14032 418 aaPredicted RBP6.14□□□□□ -1.43
NEK3-211ENST00000629912 PGM5Q15124 567 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 STXBP4Q6ZWJ1 553 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 ZNF720Q7Z2F6 126 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 MIER3Q7Z3K6 550 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 SFR1Q86XK3 245 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 C4orf19Q8IY42 314 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 IL31RAQ8NI17 732 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 PIGOQ8TEQ8 1089 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 CNKSR2Q8WXI2 1034 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 ANKRD7Q92527 254 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 GPRASP2Q96D09 838 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 ATG4CQ96DT6 458 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 RMDN3Q96TC7 470 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 EIF3CQ99613 913 aaKnown RBP6.14□□□□□ -1.43
NEK3-211ENST00000629912 PDCD2LQ9BRP1 358 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 RUSC1Q9BVN2 902 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 TIPINQ9BVW5 301 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 FGFBP2Q9BYJ0 223 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 MRPL44Q9H9J2 332 aaKnown RBP6.14□□□□□ -1.43
NEK3-211ENST00000629912 PARVGQ9HBI0 331 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 ADARB2Q9NS39 739 aaKnown RBP6.14□□□□□ -1.43
NEK3-211ENST00000629912 RNF146Q9NTX7 359 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 ANKEF1Q9NU02 776 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 AGPAT5Q9NUQ2 364 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 TYW1Q9NV66 732 aaKnown RBP6.14□□□□□ -1.43
NEK3-211ENST00000629912 DMAC2Q9NW81 257 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 TMOD4Q9NZQ9 345 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 TBC1D7Q9P0N9 293 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 DNAI1Q9UI46 699 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 RIPK3Q9Y572 518 aa6.14□□□□□ -1.43
NEK3-211ENST00000629912 PCDHB13Q9Y5F0 798 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms