RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 SNX29Q8TEQ0 813 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 KAT2BQ92831 832 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 ATP6V0A1Q93050 837 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 CTAGE1Q96RT6 745 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 MOV10L1Q9BXT6 1211 aaKnown RBP9.2□□□□□ -0.94
SMN2-214ENST00000626847 NACAP1Q9BZK3 213 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 PIM2Q9P1W9 311 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 FOXD3Q9UJU5 478 aaPredicted RBP9.2□□□□□ -0.94
SMN2-214ENST00000626847 SATB2Q9UPW6 733 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 MAPK8IP1Q9UQF2 711 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 PALLDQ8WX93 1383 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 B4DLN1 442 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 WDR46O15213 610 aaKnown RBP9.19□□□□□ -0.94
SMN2-214ENST00000626847 PHACTR2O75167 634 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 TNNI2P48788 182 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 MAPRE1Q15691 268 aaKnown RBP9.19□□□□□ -0.94
SMN2-214ENST00000626847 TRIM71Q2Q1W2 868 aaKnown RBP9.19□□□□□ -0.94
SMN2-214ENST00000626847 CCDC153Q494R4 210 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 DALRD3Q5D0E6 543 aaKnown RBP9.19□□□□□ -0.94
SMN2-214ENST00000626847 CWC27Q6UX04 472 aaKnown RBP9.19□□□□□ -0.94
SMN2-214ENST00000626847 NCCRP1Q6ZVX7 275 aaPredicted RBP9.19□□□□□ -0.94
SMN2-214ENST00000626847 YTHDF3Q7Z739 585 aaKnown RBP9.19□□□□□ -0.94
SMN2-214ENST00000626847 LUZP1Q86V48 1076 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 C11orf74Q86VG3 221 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 HOOK3Q86VS8 718 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 SESTD1Q86VW0 696 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 TEX9Q8N6V9 391 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 ZNF653Q96CK0 615 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 GAS2L1Q99501 681 aaPredicted RBP9.19□□□□□ -0.94
SMN2-214ENST00000626847 MCOLN1Q9GZU1 580 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 RUBCNLQ9H714 662 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 ELP3Q9H9T3 547 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 MIS18AQ9NYP9 233 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 GTF3C4Q9UKN8 822 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 ZNF215Q9UL58 517 aaPredicted RBP9.19□□□□□ -0.94
SMN2-214ENST00000626847 AK5Q9Y6K8 562 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 PASKQ96RG2 1323 aa9.19□□□□□ -0.94
SMN2-214ENST00000626847 TTC34A8MYJ7 566 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 NDUFAB1O14561 156 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 LSM1O15116 133 aaKnown RBP9.18□□□□□ -0.94
SMN2-214ENST00000626847 SRGAP3O43295 1099 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 SLC26A4O43511 780 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 DNAJC8O75937 253 aaPredicted RBP9.18□□□□□ -0.94
SMN2-214ENST00000626847 ADCY5O95622 1261 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 S100A1P23297 94 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 PSMC4P43686 418 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 PMS2P54278 862 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 OXCT1P55809 520 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 ELF2Q15723 593 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 LRRFIP1Q32MZ4 808 aaKnown RBP9.18□□□□□ -0.94
SMN2-214ENST00000626847 SMUG1Q53HV7 270 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 CFAP58Q5T655 872 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 C20orf194Q5TEA3 1177 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 KAZNQ674X7 775 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 XKR5Q6UX68 686 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.18□□□□□ -0.94
SMN2-214ENST00000626847 SKAP1Q86WV1 359 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 RELL1Q8IUW5 271 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 ITPRIPQ8IWB1 547 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 CCHCR1Q8TD31 782 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 ANKRD49Q8WVL7 239 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 RNF34Q969K3 372 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 SMC6Q96SB8 1091 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 CFHR5Q9BXR6 569 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 TTC12Q9H892 705 aaPredicted RBP9.18□□□□□ -0.94
SMN2-214ENST00000626847 L2HGDHQ9H9P8 463 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 PARVGQ9HBI0 331 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 KIF7Q2M1P5 1343 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 TTC21BQ7Z4L5 1316 aa9.18□□□□□ -0.94
SMN2-214ENST00000626847 IQCA1LA6NCM1 817 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 ZSCAN12O43309 604 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 SMNDC1O75940 238 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMN2-214ENST00000626847 TUBBP07437 444 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 INHBCP55103 352 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 ITIH3Q06033 890 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 CBX3Q13185 183 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 SEPT6Q14141 434 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 TRIP4Q15650 581 aaPredicted RBP9.17□□□□□ -0.94
SMN2-214ENST00000626847 SNCBQ16143 134 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 CFAP157Q5JU67 520 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 SYT2Q8N9I0 419 aaPredicted RBP9.17□□□□□ -0.94
SMN2-214ENST00000626847 ZFPM2Q8WW38 1151 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 CCDC74AQ96AQ1 378 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 HVCN1Q96D96 273 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 C8orf76Q96K31 380 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 SNX27Q96L92 541 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 SPAG5Q96R06 1193 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 HAUS7Q99871 368 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 RTFDC1Q9BY42 306 aaPredicted RBP9.17□□□□□ -0.94
SMN2-214ENST00000626847 CD248Q9HCU0 757 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 KLC4Q9NSK0 619 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 STK39Q9UEW8 545 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 GGA2Q9UJY4 613 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMN2-214ENST00000626847 KCNMB2Q9Y691 235 aa9.17□□□□□ -0.94
SMN2-214ENST00000626847 GOLGA6L7A0A1B0GV03 622 aa9.16□□□□□ -0.94
SMN2-214ENST00000626847 XYLBO75191 536 aa9.16□□□□□ -0.94
SMN2-214ENST00000626847 F11P03951 625 aa9.16□□□□□ -0.94
SMN2-214ENST00000626847 CASTP20810 708 aaKnown RBP9.16□□□□□ -0.94
SMN2-214ENST00000626847 CD9P21926 228 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms