RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 PEX26Q7Z412 305 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 ADGRA1Q86SQ6 560 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 NSRP1Q9H0G5 558 aaKnown RBP16.54■□□□□ 0.24
PMS1-221ENST00000624204 SEPT11Q9NVA2 429 aaKnown RBP16.54■□□□□ 0.24
PMS1-221ENST00000624204 TRAF5O00463 557 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 KRT16P08779 473 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 GOLGA8HP0CJ92 632 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 ATP2A2P16615 1042 aaKnown RBP16.54■□□□□ 0.24
PMS1-221ENST00000624204 CCND1P24385 295 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 ERFP50548 548 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 NCALDP61601 193 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 ITIH4Q14624 930 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 THEMISQ8N1K5 641 aaPredicted RBP16.54■□□□□ 0.24
PMS1-221ENST00000624204 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.54■□□□□ 0.242e-8■□□□□ 9.3
PMS1-221ENST00000624204 ARHGEF10LQ9HCE6 1279 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 CORO1CQ9ULV4 474 aaPredicted RBP16.54■□□□□ 0.24
PMS1-221ENST00000624204 MYH7BA7E2Y1 1941 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 LMTK3Q96Q04 1460 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 MAGEB6P1A0A0J9YX57 407 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 SMIM24O75264 130 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 LACTBP83111 547 aaPredicted RBP16.54■□□□□ 0.24
PMS1-221ENST00000624204 FAM47EQ6ZV65 393 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 GLIS3Q8NEA6 775 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 IRAK4Q9NWZ3 460 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 PCDHA4Q9UN74 947 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 TRIM33Q9UPN9 1127 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 WTIPA6NIX2 430 aaPredicted RBP16.53■□□□□ 0.24
PMS1-221ENST00000624204 ASAP2O43150 1006 aa16.53■□□□□ 0.24
PMS1-221ENST00000624204 KIF5BP33176 963 aa16.53■□□□□ 0.24
PMS1-221ENST00000624204 PPP1R2P41236 205 aa16.53■□□□□ 0.24
PMS1-221ENST00000624204 USP11P51784 963 aa16.53■□□□□ 0.24
PMS1-221ENST00000624204 ATP11AP98196 1134 aa16.53■□□□□ 0.24
PMS1-221ENST00000624204 DENND2CQ68D51 928 aa16.53■□□□□ 0.24
PMS1-221ENST00000624204 PBKQ96KB5 322 aa16.53■□□□□ 0.24
PMS1-221ENST00000624204 CEP72Q9P209 647 aa16.53■□□□□ 0.24
PMS1-221ENST00000624204 PKD1L3Q7Z443 1732 aa16.53■□□□□ 0.24
PMS1-221ENST00000624204 SPDYE3A6NKU9 549 aa16.53■□□□□ 0.24
PMS1-221ENST00000624204 FOXO6A8MYZ6 492 aa16.53■□□□□ 0.24
PMS1-221ENST00000624204 CCNT1O60563 726 aaKnown RBP16.53■□□□□ 0.24
PMS1-221ENST00000624204 DDAH1O94760 285 aa16.53■□□□□ 0.24
PMS1-221ENST00000624204 CTCFP49711 727 aaPredicted RBP16.53■□□□□ 0.24
PMS1-221ENST00000624204 PLTPP55058 493 aa16.53■□□□□ 0.24
PMS1-221ENST00000624204 ASIC2Q16515 512 aa16.53■□□□□ 0.24
PMS1-221ENST00000624204 SLC30A9Q6PML9 568 aa16.53■□□□□ 0.24
PMS1-221ENST00000624204 GIGYF2Q6Y7W6 1299 aaKnown RBP16.53■□□□□ 0.24
PMS1-221ENST00000624204 HOMER3Q9NSC5 361 aa16.53■□□□□ 0.24
PMS1-221ENST00000624204 PNPLA7Q6ZV29 1317 aa16.53■□□□□ 0.24
PMS1-221ENST00000624204 GOLGA6L10A0A0M3HER8 536 aa16.52■□□□□ 0.24
PMS1-221ENST00000624204 PECAM1P16284 738 aaPredicted RBP16.52■□□□□ 0.24
PMS1-221ENST00000624204 PIGWQ7Z7B1 504 aa16.52■□□□□ 0.24
PMS1-221ENST00000624204 ANKRD42Q8N9B4 389 aa16.52■□□□□ 0.24
PMS1-221ENST00000624204 TLCD1Q96CP7 247 aa16.52■□□□□ 0.24
PMS1-221ENST00000624204 TSG101Q99816 390 aa16.52■□□□□ 0.24
PMS1-221ENST00000624204 RBAK-RBAKDNI3L0D1 243 aa16.52■□□□□ 0.24
PMS1-221ENST00000624204 RARAP10276 462 aa16.52■□□□□ 0.24
PMS1-221ENST00000624204 NEFHP12036 1026 aa16.52■□□□□ 0.24
PMS1-221ENST00000624204 SV2BQ7L1I2 683 aa16.52■□□□□ 0.24
PMS1-221ENST00000624204 EIF1ADQ8N9N8 165 aaKnown RBP16.52■□□□□ 0.24
PMS1-221ENST00000624204 ATXN2LQ8WWM7 1075 aaKnown RBP16.52■□□□□ 0.24
PMS1-221ENST00000624204 GJA10Q969M2 543 aa16.52■□□□□ 0.24
PMS1-221ENST00000624204 CALML4Q96GE6 196 aa16.52■□□□□ 0.24
PMS1-221ENST00000624204 CDK5RAP3Q96JB5 506 aa16.52■□□□□ 0.24
PMS1-221ENST00000624204 TSC22D3Q99576 134 aa16.52■□□□□ 0.24
PMS1-221ENST00000624204 C7orf25Q9BPX7 421 aa16.52■□□□□ 0.24
PMS1-221ENST00000624204 DNAJC17Q9NVM6 304 aaKnown RBP16.52■□□□□ 0.24
PMS1-221ENST00000624204 AFF2P51816 1311 aa16.52■□□□□ 0.24
PMS1-221ENST00000624204 H0Y3Z8 333 aa16.52■□□□□ 0.23
PMS1-221ENST00000624204 LINGO3P0C6S8 592 aa16.52■□□□□ 0.23
PMS1-221ENST00000624204 TXKP42681 527 aa16.52■□□□□ 0.23
PMS1-221ENST00000624204 EIF3BP55884 814 aaKnown RBP16.52■□□□□ 0.23
PMS1-221ENST00000624204 BLMHQ13867 455 aa16.52■□□□□ 0.23
PMS1-221ENST00000624204 KRT28Q7Z3Y7 464 aa16.52■□□□□ 0.23
PMS1-221ENST00000624204 ZMYND12Q9H0C1 365 aa16.52■□□□□ 0.23
PMS1-221ENST00000624204 FGFR1OP2Q9NVK5 253 aa16.52■□□□□ 0.23
PMS1-221ENST00000624204 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.52■□□□□ 0.235e-7■■■□□ 15.2
PMS1-221ENST00000624204 ZFATQ9P243 1243 aa16.52■□□□□ 0.23
PMS1-221ENST00000624204 G3BP2Q9UN86 482 aaKnown RBP16.52■□□□□ 0.23
PMS1-221ENST00000624204 USP17L12C9JPN9 530 aa16.51■□□□□ 0.23
PMS1-221ENST00000624204 USP17L21D6R901 530 aa16.51■□□□□ 0.23
PMS1-221ENST00000624204 MARCH6O60337 910 aa16.51■□□□□ 0.23
PMS1-221ENST00000624204 PCK1P35558 622 aa16.51■□□□□ 0.23
PMS1-221ENST00000624204 ABL2P42684 1182 aa16.51■□□□□ 0.23
PMS1-221ENST00000624204 MEX3CQ5U5Q3 659 aaKnown RBP16.51■□□□□ 0.23
PMS1-221ENST00000624204 PAIP2Q9BPZ3 127 aaKnown RBP16.51■□□□□ 0.23
PMS1-221ENST00000624204 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.51■□□□□ 0.231e-16■■■■■ 250
PMS1-221ENST00000624204 FAM114A2Q9NRY5 505 aa16.51■□□□□ 0.23
PMS1-221ENST00000624204 PNMA3Q9UL41 463 aa16.51■□□□□ 0.23
PMS1-221ENST00000624204 MSH2P43246 934 aa16.51■□□□□ 0.23
PMS1-221ENST00000624204 NEK9Q8TD19 979 aa16.51■□□□□ 0.23
PMS1-221ENST00000624204 ACTRT1Q8TDG2 376 aa16.51■□□□□ 0.23
PMS1-221ENST00000624204 CENPTQ96BT3 561 aa16.51■□□□□ 0.23
PMS1-221ENST00000624204 CUEDC2Q9H467 287 aa16.51■□□□□ 0.23
PMS1-221ENST00000624204 ARPP21Q9UBL0 812 aaPredicted RBP16.51■□□□□ 0.23
PMS1-221ENST00000624204 PARP4Q9UKK3 1724 aaKnown RBP16.51■□□□□ 0.23
PMS1-221ENST00000624204 TSPY2A6NKD2 308 aa16.51■□□□□ 0.23
PMS1-221ENST00000624204 NOL4O94818 638 aa16.51■□□□□ 0.23
PMS1-221ENST00000624204 LUC7L3O95232 432 aaKnown RBP16.51■□□□□ 0.23
PMS1-221ENST00000624204 FGGP02679 453 aa16.51■□□□□ 0.23
PMS1-221ENST00000624204 SESN3P58005 492 aa16.51■□□□□ 0.23
PMS1-221ENST00000624204 MXRA7P84157 204 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms