RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 A0A1W2PQ64 194 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 A0A1W2PQD8 194 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 GSTTP1A0A1W2PQM5 241 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 A0A1W2PQY0 241 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 A6NJR5 290 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 HOXD8P13378 290 aaPredicted RBP22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 CPT1AP50416 773 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 ATN1P54259 1190 aaPredicted RBP22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 SHC4Q6S5L8 630 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 AFG1LQ8WV93 481 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 PP2D1A8MPX8 630 aa22.27■■□□□ 1.16
PDLIM2-221ENST00000622702 ZEB2O60315 1214 aa22.27■■□□□ 1.16
PDLIM2-221ENST00000622702 SUPT20HL2P0C7V6 817 aa22.27■■□□□ 1.16
PDLIM2-221ENST00000622702 MIS18BP1Q6P0N0 1132 aa22.27■■□□□ 1.16
PDLIM2-221ENST00000622702 ERMNQ8TAM6 284 aa22.27■■□□□ 1.16
PDLIM2-221ENST00000622702 NEK9Q8TD19 979 aa22.27■■□□□ 1.16
PDLIM2-221ENST00000622702 SAMM50Q9Y512 469 aa22.27■■□□□ 1.16
PDLIM2-221ENST00000622702 ALPK3Q96L96 1907 aa22.27■■□□□ 1.15
PDLIM2-221ENST00000622702 IGKV6D-21A0A0A0MT36 114 aa22.26■■□□□ 1.15
PDLIM2-221ENST00000622702 GOLGA6L22H0YM25 854 aa22.26■■□□□ 1.15
PDLIM2-221ENST00000622702 SLC26A4O43511 780 aa22.26■■□□□ 1.15
PDLIM2-221ENST00000622702 PPFIA4O75335 1185 aa22.26■■□□□ 1.15
PDLIM2-221ENST00000622702 PSAPP07602 524 aa22.26■■□□□ 1.15
PDLIM2-221ENST00000622702 CMA1P23946 247 aa22.26■■□□□ 1.15
PDLIM2-221ENST00000622702 CDC25AP30304 524 aa22.26■■□□□ 1.15
PDLIM2-221ENST00000622702 LRRC26Q2I0M4 334 aa22.26■■□□□ 1.15
PDLIM2-221ENST00000622702 SPECC1Q5M775 1068 aa22.26■■□□□ 1.15
PDLIM2-221ENST00000622702 RESP18Q5W5W9 173 aa22.26■■□□□ 1.15
PDLIM2-221ENST00000622702 KRT79Q5XKE5 535 aa22.26■■□□□ 1.15
PDLIM2-221ENST00000622702 HAUS3Q68CZ6 603 aa22.26■■□□□ 1.15
PDLIM2-221ENST00000622702 SYMPKQ92797 1274 aaKnown RBP22.26■■□□□ 1.15
PDLIM2-221ENST00000622702 HSD17B14Q9BPX1 270 aa22.26■■□□□ 1.15
PDLIM2-221ENST00000622702 EIF2AK1Q9BQI3 630 aaKnown RBP22.26■■□□□ 1.15
PDLIM2-221ENST00000622702 MMTAG2Q9BU76 263 aaKnown RBP22.26■■□□□ 1.15
PDLIM2-221ENST00000622702 CCSER1Q9C0I3 900 aa22.26■■□□□ 1.15
PDLIM2-221ENST00000622702 GOLGA6L4A6NEF3 574 aa22.25■■□□□ 1.15
PDLIM2-221ENST00000622702 PRPF40AO75400 957 aaKnown RBP22.25■■□□□ 1.15
PDLIM2-221ENST00000622702 MMP3P08254 477 aa22.25■■□□□ 1.15
PDLIM2-221ENST00000622702 TCF7P36402 384 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-221ENST00000622702 UBA7P41226 1012 aa22.25■■□□□ 1.15
PDLIM2-221ENST00000622702 BRDTQ58F21 947 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-221ENST00000622702 CXCL17Q6UXB2 119 aa22.25■■□□□ 1.15
PDLIM2-221ENST00000622702 SLC39A5Q6ZMH5 540 aa22.25■■□□□ 1.15
PDLIM2-221ENST00000622702 USP49Q70CQ1 688 aa22.25■■□□□ 1.15
PDLIM2-221ENST00000622702 SNX29Q8TEQ0 813 aa22.25■■□□□ 1.15
PDLIM2-221ENST00000622702 VTI1AQ96AJ9 217 aa22.25■■□□□ 1.15
PDLIM2-221ENST00000622702 EPSTI1Q96J88 318 aa22.25■■□□□ 1.15
PDLIM2-221ENST00000622702 GLT1D1Q96MS3 346 aa22.25■■□□□ 1.15
PDLIM2-221ENST00000622702 POLR3CQ9BUI4 534 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-221ENST00000622702 STARD7Q9NQZ5 370 aa22.25■■□□□ 1.15
PDLIM2-221ENST00000622702 PDE4DIPQ5VU43 2346 aa22.25■■□□□ 1.15
PDLIM2-221ENST00000622702 EMSYQ7Z589 1322 aa22.24■■□□□ 1.15
PDLIM2-221ENST00000622702 LGR5O75473 907 aa22.24■■□□□ 1.15
PDLIM2-221ENST00000622702 P4HBP07237 508 aaKnown RBP22.24■■□□□ 1.15
PDLIM2-221ENST00000622702 RPA1P27694 616 aa22.24■■□□□ 1.15
PDLIM2-221ENST00000622702 TUFT1Q9NNX1 390 aa22.24■■□□□ 1.15
PDLIM2-221ENST00000622702 FAM237AA0A1B0GTK4 181 aa22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 EVI5O60447 810 aa22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 SLITRK3O94933 977 aa22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 MYL3P08590 195 aa22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 SPATA31C1P0DKV0 1188 aa22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 MUTP22033 750 aa22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 TXLNAP40222 546 aa22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 UBE2HP62256 183 aa22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 DGKDQ16760 1214 aa22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 HYIQ5T013 277 aa22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 CABP7Q86V35 215 aa22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 CCDC60Q8IWA6 550 aaPredicted RBP22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 AFAP1L1Q8TED9 768 aa22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 PCYT2Q99447 389 aa22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 LMBRD1Q9NUN5 540 aa22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 RGL1Q9NZL6 768 aa22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 IGSF9BQ9UPX0 1349 aa22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 KDM3AQ9Y4C1 1321 aa22.23■■□□□ 1.15
PDLIM2-221ENST00000622702 GADD45BO75293 160 aaPredicted RBP22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 MED24O75448 989 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 MCM4P33991 863 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 CCT6AP40227 531 aaKnown RBP22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 QARSP47897 775 aaKnown RBP22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 SWSAP1Q6NVH7 229 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 CATSPER3Q86XQ3 398 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 MRPS27Q92552 414 aaKnown RBP22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 DYDC2Q96IM9 177 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 FAM13BQ9NYF5 915 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 GABBR1Q9UBS5 961 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 MAFBQ9Y5Q3 323 aaPredicted RBP22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 BACH1O14867 736 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 CABYRO75952 493 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 PSMC5P62195 406 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 CYP4A11Q02928 519 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 FAM160B1Q5W0V3 765 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 KCTD17Q8N5Z5 321 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 ATP6V0A1Q93050 837 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 LXNQ9BS40 222 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 AZI2Q9H6S1 392 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 ZSWIM4Q9H7M6 989 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 ZNF302Q9NR11 478 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 HPSEQ9Y251 543 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 ATP11BQ9Y2G3 1177 aa22.22■■□□□ 1.15
PDLIM2-221ENST00000622702 WDR81Q562E7 1941 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms