RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 HOXD13P35453 343 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 GGCXP38435 758 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 STAT3P40763 770 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 PRKCIP41743 596 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 KLHL30Q0D2K2 578 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 KCNH2Q12809 1159 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 RAPGEF1Q13905 1077 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 NFIL3Q16649 462 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 KNOP1Q1ED39 458 aaKnown RBP10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 SYDE2Q5VT97 1194 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 TMEM179Q6ZVK1 233 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 SND1Q7KZF4 910 aaKnown RBP eCLIP10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 IRF2BP2Q7Z5L9 587 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 FBXO11Q86XK2 927 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 CATSPER3Q86XQ3 398 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 GSPT2Q8IYD1 628 aaKnown RBP10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 HDAC7Q8WUI4 952 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 TBC1D5Q92609 795 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 DRC1Q96MC2 740 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 METTL14Q9HCE5 456 aaKnown RBP10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 FAM198AQ9UFP1 575 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 HDAC9Q9UKV0 1011 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 A0A087X0T9 212 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 POTEFA5A3E0 1075 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 GOLGA6BA6NDN3 693 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 DDTLA6NHG4 134 aaPredicted RBP10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 BHMG1C9JSJ3 638 aaPredicted RBP10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 BUB1O43683 1085 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 PHACTR2O75167 634 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 PALMO75781 387 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 EYA4O95677 639 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 FAM228BP0C875 321 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 POTEIP0CG38 1075 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 MYBP10242 640 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 KLRC1P26715 233 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 PDE6BP35913 854 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 APBA1Q02410 837 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 RAD51AP2Q09MP3 1159 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 EPHA7Q15375 998 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 STRIP1Q5VSL9 837 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 C8orf74Q6P047 294 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 POTEGQ6S5H5 508 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 POTEEQ6S8J3 1075 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 SH3BP5LQ7L8J4 393 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 SFR1Q86XK3 245 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 IFT20Q8IY31 132 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 NLGN1Q8N2Q7 840 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 MREGQ8N565 214 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 ANKRD13CQ8N6S4 541 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 EIF1ADQ8N9N8 165 aaKnown RBP10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 INPP4AQ96PE3 977 aaPredicted RBP10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 RBM12Q9NTZ6 932 aaKnown RBP10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 TYW1Q9NV66 732 aaKnown RBP10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 ARMCX3Q9UH62 379 aaPredicted RBP10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 VAV3Q9UKW4 847 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 TRPC5Q9UL62 973 aaPredicted RBP10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 AFF2P51816 1311 aa10.56□□□□□ -0.72
IGHV3-54-201ENST00000622166 ATRNL1Q5VV63 1379 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 GTPBP10A4D1E9 387 aaKnown RBP10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 F5H6K3 240 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 G3V3G9 751 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 PIK3CDO00329 1044 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 MSH4O15457 936 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 PPFIA4O75335 1185 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 ENTPD3O75355 529 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 GFPT2O94808 682 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 MUTP22033 750 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 NR2F2P24468 414 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 RPL13P26373 211 aaKnown RBP10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 PON1P27169 355 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 EPS15P42566 896 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 CASP5P51878 434 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 PSMC6P62333 389 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 IRX5P78411 483 aaPredicted RBP10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 CACNB1Q02641 598 aaPredicted RBP10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 ICA1Q05084 483 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 KLRC3Q07444 240 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 TRAF1Q13077 416 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 PPFIA1Q13136 1202 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 PAK2Q13177 524 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 SLC15A2Q16348 729 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 IFI16Q16666 785 aaKnown RBP10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 PRR16Q569H4 304 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 DACT2Q5SW24 774 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 DCAF8Q5TAQ9 597 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 GBP6Q6ZN66 633 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 C1orf131Q8NDD1 294 aaKnown RBP10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 FAM76AQ8TAV0 307 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 MASTLQ96GX5 879 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 PBKQ96KB5 322 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 REEP2Q9BRK0 252 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 SIX2Q9NPC8 291 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 SMARCAL1Q9NZC9 954 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 EHD2Q9NZN4 543 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 TMEM59LQ9UK28 342 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 INTUQ9ULD6 942 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 UBE4BO95155 1302 aa10.55□□□□□ -0.72
IGHV3-54-201ENST00000622166 SLX4Q8IY92 1834 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 A0A0A6YYK5 440 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms