RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	NFS1	Q9Y697	457 aa		15.72	■□□□□ 0.11
SYNRG-231	ENST00000622045	NUP98	P52948	1817 aa		15.72	■□□□□ 0.11
SYNRG-231	ENST00000622045	PALM3	A6NDB9	673 aa	Predicted RBP	15.72	■□□□□ 0.11
SYNRG-231	ENST00000622045		F8W031	263 aa	Predicted RBP	15.72	■□□□□ 0.11
SYNRG-231	ENST00000622045	MGRN1	O60291	552 aa		15.72	■□□□□ 0.11
SYNRG-231	ENST00000622045	DRD4	P21917	467 aa		15.72	■□□□□ 0.11
SYNRG-231	ENST00000622045	DHX9	Q08211	1270 aa	Known RBP	15.72	■□□□□ 0.11
SYNRG-231	ENST00000622045	ZNF287	Q9HBT7	754 aa		15.72	■□□□□ 0.11
SYNRG-231	ENST00000622045	AMACR	Q9UHK6	382 aa		15.72	■□□□□ 0.11
SYNRG-231	ENST00000622045	PAPPA	Q13219	1627 aa		15.72	■□□□□ 0.11
SYNRG-231	ENST00000622045	ANP32D	O95626	131 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	TNNI2	P48788	182 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	FKBP3	Q00688	224 aa	Known RBP	15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	SF3B3	Q15393	1217 aa	Known RBP	15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	SMIM5	Q71RC9	77 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	CCDC197	Q8NCU1	140 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	TBC1D22A	Q8WUA7	517 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	EYA3	Q99504	573 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	CELF4	Q9BZC1	486 aa	Known RBP	15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	ISCU	Q9H1K1	167 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	GOPC	Q9HD26	462 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	STK17A	Q9UEE5	414 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	SSU72P8	A0A1W2PR75	194 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	CCT8L1P	A6NM43	557 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	PJA2	O43164	708 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	SERPING1	P05155	500 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	IFNAR2	P48551	515 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	RPS6KA1	Q15418	735 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	TXNRD3	Q86VQ6	643 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	ELAC2	Q9BQ52	826 aa	Known RBP	15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	BLOC1S4	Q9NUP1	217 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	ATP8A1	Q9Y2Q0	1164 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	COL4A3BP	Q9Y5P4	624 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	ITGA4	P13612	1032 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045	ECHS1	P30084	290 aa		15.71	■□□□□ 0.11
SYNRG-231	ENST00000622045		A0A087X0T9	212 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	SART1	O43290	800 aa	Known RBP	15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	LCA5L	O95447	670 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	KRT18	P05783	430 aa	Known RBP	15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	FAM228B	P0C875	321 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	KCNQ4	P56696	695 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	HGSNAT	Q68CP4	663 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	FAM133A	Q8N9E0	248 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	LMBR1	Q8WVP7	490 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	ANKRD2	Q9GZV1	360 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	TDP2	O95551	362 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	DDB1	Q16531	1140 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	LRIG3	Q6UXM1	1119 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	ADAT2	Q7Z6V5	191 aa	Known RBP	15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	COA7	Q96BR5	231 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	CHMP6	Q96FZ7	201 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	LRRC27	Q9C0I9	530 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	NUCKS1	Q9H1E3	243 aa	Known RBP	15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	RIC8A	Q9NPQ8	531 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	PANK4	Q9NVE7	773 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	GRID2IP	A4D2P6	1211 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	TLR2	O60603	784 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	DIAPH2	O60879	1101 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	VIM	P08670	466 aa	Known RBP	15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	MEI1	Q5TIA1	1274 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	MAEA	Q7L5Y9	396 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	RNF217	Q8TC41	542 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	PRCC	Q92733	491 aa	Predicted RBP	15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	XPO6	Q96QU8	1125 aa	Known RBP	15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	FAM167B	Q9BTA0	163 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	CCDC113	Q9H0I3	377 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	CD2AP	Q9Y5K6	639 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	SLIT2	O94813	1529 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	DOCK2	Q92608	1830 aa		15.7	■□□□□ 0.1
SYNRG-231	ENST00000622045	BRD2	P25440	801 aa	Known RBP	15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	ASTE1	Q2TB18	679 aa	Predicted RBP	15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	SPAG5	Q96R06	1193 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	CEP72	Q9P209	647 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	KCNMA1	Q12791	1236 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	BIRC3	Q13489	604 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	NAB2	Q15742	525 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	NBPF5P	Q86XG9	351 aa	Predicted RBP	15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	NUDT12	Q9BQG2	462 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	FRMPD2	Q68DX3	1309 aa	Predicted RBP	15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	BCOR	Q6W2J9	1755 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	KRIT1	O00522	736 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	PPIP5K2	O43314	1243 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	CACNB1	Q02641	598 aa	Predicted RBP	15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	LACTB2	Q53H82	288 aa	Predicted RBP	15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	FAM26F	Q5R3K3	315 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	AGAP11	Q8TF27	550 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	RAD54L	Q92698	747 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	PNMA5	Q96PV4	448 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	PSMD1	Q99460	953 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	ATP6V0A2	Q9Y487	856 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	TTI1	O43156	1089 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	CAND2	O75155	1236 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	DNAJC8	O75937	253 aa	Predicted RBP	15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	MYBL1	P10243	752 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	ASIC2	Q16515	512 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	HERC4	Q5GLZ8	1057 aa	Predicted RBP	15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	KIF2B	Q8N4N8	673 aa		15.69	■□□□□ 0.1
SYNRG-231	ENST00000622045	ANKS1A	Q92625	1134 aa		15.69	■□□□□ 0.1

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