RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 DIXDC1Q155Q3 683 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 ZRSR2Q15696 482 aaKnown RBP7.59□□□□□ -1.19
NEDD9-216ENST00000620854 SLC35G1Q2M3R5 365 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 DAAM2Q86T65 1068 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 RPAINQ86UA6 219 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 RAPGEF5Q92565 580 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 FGFBP2Q9BYJ0 223 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 TAF1DQ9H5J8 278 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-216ENST00000620854 C6orf50Q9HD87 102 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 MLXIPLQ9NP71 852 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 TPX2Q9ULW0 747 aaKnown RBP7.59□□□□□ -1.19
NEDD9-216ENST00000620854 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.59□□□□□ -1.19
NEDD9-216ENST00000620854 HMGB1P1B2RPK0 211 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-216ENST00000620854 TDP2O95551 362 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 VIMP08670 466 aaKnown RBP7.59□□□□□ -1.19
NEDD9-216ENST00000620854 PRLRP16471 622 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 ABCB4P21439 1286 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 PEX19P40855 299 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 RCAN1P53805 252 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 ADCY1Q08828 1119 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 TNIP1Q15025 636 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 NONOQ15233 471 aaKnown RBP eCLIP7.59□□□□□ -1.19
NEDD9-216ENST00000620854 HGSNATQ68CP4 663 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 C3orf67Q6ZVT6 689 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 MGARPQ8TDB4 240 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 LARP4BQ92615 738 aaKnown RBP7.59□□□□□ -1.19
NEDD9-216ENST00000620854 MASTLQ96GX5 879 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 TRIM51Q9BSJ1 452 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 PNMA2Q9UL42 364 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 CLEC11AQ9Y240 323 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 CNTNAP4Q9C0A0 1308 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 TNS2Q63HR2 1409 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 GRID2IPA4D2P6 1211 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 UPP2O95045 317 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 ZNF844Q08AG5 666 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 UAP1Q16222 522 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-216ENST00000620854 ACCSLQ4AC99 568 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 GRIPAP1Q4V328 841 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 CCDC38Q502W7 563 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 HERC4Q5GLZ8 1057 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-216ENST00000620854 GKAP1Q5VSY0 366 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-216ENST00000620854 WDR78Q5VTH9 848 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 CENPPQ6IPU0 288 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 SLC51AQ86UW1 340 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 ARFGAP2Q8N6H7 521 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 USP38Q8NB14 1042 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 FAM84BQ96KN1 310 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-216ENST00000620854 MMTAG2Q9BU76 263 aaKnown RBP7.58□□□□□ -1.2
NEDD9-216ENST00000620854 TMBIM4Q9HC24 238 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 ARPP21Q9UBL0 812 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-216ENST00000620854 MINPP1Q9UNW1 487 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 FRMPD2Q68DX3 1309 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-216ENST00000620854 SCTRP47872 440 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 TCP10Q12799 353 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 TRAF1Q13077 416 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 CALCRLQ16602 461 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 NEK8Q86SG6 692 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 HVCN1Q96D96 273 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 PIGSQ96S52 555 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 USP40Q9NVE5 1235 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 ANAPC4Q9UJX5 808 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 CAMTA1Q9Y6Y1 1673 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 SCN11AQ9UI33 1791 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 A0A1W2PRG0 241 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 SLC9A1P19634 815 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 PSEN1P49768 467 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 SCNN1DP51172 638 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 PTK2Q05397 1052 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 MYO1EQ12965 1108 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 ZNF211Q13398 564 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-216ENST00000620854 IFI16Q16666 785 aaKnown RBP7.58□□□□□ -1.2
NEDD9-216ENST00000620854 GLE1Q53GS7 698 aaKnown RBP7.58□□□□□ -1.2
NEDD9-216ENST00000620854 CC2D2BQ6DHV5 1058 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 ZNF662Q6ZS27 426 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 MAEAQ7L5Y9 396 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 PEX26Q7Z412 305 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 WHAMMQ8TF30 809 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 ANKS1AQ92625 1134 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 GLG1Q92896 1179 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 ELAC2Q9BQ52 826 aaKnown RBP7.58□□□□□ -1.2
NEDD9-216ENST00000620854 DONSONQ9NYP3 566 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 CHORDC1Q9UHD1 332 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-216ENST00000620854 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.58□□□□□ -1.2
NEDD9-216ENST00000620854 MYH7P12883 1935 aa7.58□□□□□ -1.2
NEDD9-216ENST00000620854 A0A1W2PQJ5 194 aa7.57□□□□□ -1.2
NEDD9-216ENST00000620854 A6NNZ2 444 aa7.57□□□□□ -1.2
NEDD9-216ENST00000620854 RASSF9O75901 435 aa7.57□□□□□ -1.2
NEDD9-216ENST00000620854 PLTPP55058 493 aa7.57□□□□□ -1.2
NEDD9-216ENST00000620854 PPP2R2AP63151 447 aa7.57□□□□□ -1.2
NEDD9-216ENST00000620854 TUBB8Q3ZCM7 444 aa7.57□□□□□ -1.2
NEDD9-216ENST00000620854 GJB7Q6PEY0 223 aa7.57□□□□□ -1.2
NEDD9-216ENST00000620854 FAM228AQ86W67 206 aa7.57□□□□□ -1.2
NEDD9-216ENST00000620854 MYOCDQ8IZQ8 938 aa7.57□□□□□ -1.2
NEDD9-216ENST00000620854 FBF1Q8TES7 1133 aa7.57□□□□□ -1.2
NEDD9-216ENST00000620854 NSUN4Q96CB9 384 aaKnown RBP7.57□□□□□ -1.2
NEDD9-216ENST00000620854 C7orf25Q9BPX7 421 aa7.57□□□□□ -1.2
NEDD9-216ENST00000620854 BLOC1S4Q9NUP1 217 aa7.57□□□□□ -1.2
NEDD9-216ENST00000620854 MAD2L2Q9UI95 211 aa7.57□□□□□ -1.2
NEDD9-216ENST00000620854 STK38LQ9Y2H1 464 aa7.57□□□□□ -1.2
NEDD9-216ENST00000620854 NR2E1Q9Y466 385 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms