RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 ZNF853P0CG23 659 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 PDE1BQ01064 536 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 PPFIA1Q13136 1202 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 MTRQ99707 1265 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 MAN1B1Q9UKM7 699 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 TCP1P17987 556 aaKnown RBP12.31□□□□□ -0.44
CLIP1-219ENST00000620786 FKBP3Q00688 224 aaKnown RBP12.31□□□□□ -0.44
CLIP1-219ENST00000620786 TSPY1Q01534 308 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 IQCB1Q15051 598 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 JADE1Q6IE81 842 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 RWDD4Q6NW29 188 aaKnown RBP12.31□□□□□ -0.44
CLIP1-219ENST00000620786 MICALL2Q8IY33 904 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 CALN1Q9BXU9 219 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 BHMT2Q9H2M3 363 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 HAUS4Q9H6D7 363 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 EFCC1Q9HA90 598 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 PIDD1Q9HB75 910 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 TOPORSQ9NS56 1045 aaPredicted RBP12.31□□□□□ -0.44
CLIP1-219ENST00000620786 PCDHB6Q9Y5E3 794 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 NEDD4P46934 1319 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 A6NNZ2 444 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 TUBB8Q3ZCM7 444 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 SPATA33Q96N06 139 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 TMEM47Q9BQJ4 181 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 GDAQ9Y2T3 454 aa12.31□□□□□ -0.44
CLIP1-219ENST00000620786 EPN1Q9Y6I3 576 aaPredicted RBP12.31□□□□□ -0.44
CLIP1-219ENST00000620786 ZNF18P17022 549 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 HACL1Q9UJ83 578 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 TNPO2O14787 897 aaKnown RBP12.3□□□□□ -0.44
CLIP1-219ENST00000620786 GRIN3BO60391 1043 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 INHBAP08476 426 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 LIFRP42702 1097 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 NT5C2P49902 561 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 RHPN2Q8IUC4 686 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 SCN4BQ8IWT1 228 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 SPDYE1Q8NFV5 336 aaPredicted RBP12.3□□□□□ -0.44
CLIP1-219ENST00000620786 RPAP3Q9H6T3 665 aaPredicted RBP12.3□□□□□ -0.44
CLIP1-219ENST00000620786 ACAD9Q9H845 621 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 SNAP23O00161 211 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 MAPK6Q16659 721 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 ZNF568Q3ZCX4 644 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 SPATA31A6Q5VVP1 1343 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 PHLPP2Q6ZVD8 1323 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 CPSF1Q10570 1443 aaKnown RBP12.3□□□□□ -0.44
CLIP1-219ENST00000620786 TTC36A6NLP5 189 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 CASQ2O14958 399 aaPredicted RBP12.3□□□□□ -0.44
CLIP1-219ENST00000620786 PPFIA4O75335 1185 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 SLFN14P0C7P3 912 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 CDO1Q16878 200 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 ZNF667Q5HYK9 610 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 KSR1Q8IVT5 923 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 TBC1D22BQ9NU19 505 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 MOSPD1Q9UJG1 213 aa12.3□□□□□ -0.44
CLIP1-219ENST00000620786 NAA25Q14CX7 972 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 TMTC3Q6ZXV5 915 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 PLA2R1Q13018 1463 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 USP17L15C9J2P7 530 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 USP17L13C9JLJ4 530 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 USP17L11C9JVI0 530 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 USP17L18D6R9N7 530 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 USP17L22D6RA61 530 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 USP17L17D6RBQ6 530 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 USP17L19D6RCP7 530 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 USP17L20D6RJB6 530 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 POC1B-GALNT4F8VUJ3 575 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 CLDN3O15551 220 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 COPB2P35606 906 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 ZNF157P51786 506 aaPredicted RBP12.29□□□□□ -0.44
CLIP1-219ENST00000620786 GOLGA8FQ08AF8 430 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 GOLGA8DPQ0D2H9 430 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 USP17L24Q0WX57 530 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 TMED8Q6PL24 325 aaPredicted RBP12.29□□□□□ -0.44
CLIP1-219ENST00000620786 CEP95Q96GE4 821 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 BCAP29Q9UHQ4 241 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 RWDD2AQ9UIY3 292 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 CASP2P42575 452 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 RBL2Q08999 1139 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 TTC31Q49AM3 519 aaPredicted RBP12.29□□□□□ -0.44
CLIP1-219ENST00000620786 SGO2Q562F6 1265 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 NDUFAF2Q8N183 169 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 BEST2Q8NFU1 509 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 HSPH1Q92598 858 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 SRPRBQ9Y5M8 271 aaKnown RBP12.29□□□□□ -0.44
CLIP1-219ENST00000620786 NMT2O60551 498 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 NFKBIAP25963 317 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 GPC3P51654 580 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 VPS72Q15906 364 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 SLC44A5Q8NCS7 719 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 CABS1Q96KC9 395 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 HUS1O60921 280 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 PKP1Q13835 747 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 EPHA10Q5JZY3 1008 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 MCPH1Q8NEM0 835 aa12.29□□□□□ -0.44
CLIP1-219ENST00000620786 MAGOHBQ96A72 148 aaKnown RBP12.29□□□□□ -0.44
CLIP1-219ENST00000620786 KRT76Q01546 638 aa12.28□□□□□ -0.44
CLIP1-219ENST00000620786 TMTC4Q5T4D3 741 aa12.28□□□□□ -0.44
CLIP1-219ENST00000620786 TBC1D10CQ8IV04 446 aa12.28□□□□□ -0.44
CLIP1-219ENST00000620786 DYDC2Q96IM9 177 aa12.28□□□□□ -0.44
CLIP1-219ENST00000620786 CPVLQ9H3G5 476 aa12.28□□□□□ -0.44
CLIP1-219ENST00000620786 THAP9Q9H5L6 903 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms