RNA–Protein interactions for RNA: ENST00000620694.1

THSD4-207, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 3

Gene THSD4, Length 416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-207ENST00000620694 CAGE1Q8TC20 777 aa27.52■■■□□ 2
THSD4-207ENST00000620694 TNPO1Q92973 898 aaKnown RBP27.52■■■□□ 2
THSD4-207ENST00000620694 WNT8AQ9H1J5 351 aa27.52■■■□□ 2
THSD4-207ENST00000620694 ZNF302Q9NR11 478 aa27.52■■■□□ 2
THSD4-207ENST00000620694 PCDHA10Q9Y5I2 948 aa27.52■■■□□ 2
THSD4-207ENST00000620694 WDR64B1ANS9 1081 aa27.51■■□□□ 1.99
THSD4-207ENST00000620694 PITPNM1O00562 1244 aa27.51■■□□□ 1.99
THSD4-207ENST00000620694 CHMP2AO43633 222 aa27.51■■□□□ 1.99
THSD4-207ENST00000620694 MARCH6O60337 910 aa27.51■■□□□ 1.99
THSD4-207ENST00000620694 PSMD10O75832 226 aa27.51■■□□□ 1.99
THSD4-207ENST00000620694 SLC26A2P50443 739 aa27.51■■□□□ 1.99
THSD4-207ENST00000620694 PPFIA1Q13136 1202 aa27.51■■□□□ 1.99
THSD4-207ENST00000620694 SWSAP1Q6NVH7 229 aa27.51■■□□□ 1.99
THSD4-207ENST00000620694 CCDC60Q8IWA6 550 aaPredicted RBP27.51■■□□□ 1.99
THSD4-207ENST00000620694 AFAP1L1Q8TED9 768 aa27.51■■□□□ 1.99
THSD4-207ENST00000620694 FAM20AQ96MK3 541 aa27.51■■□□□ 1.99
THSD4-207ENST00000620694 TRPC6Q9Y210 931 aa27.51■■□□□ 1.99
THSD4-207ENST00000620694 EPHB4P54760 987 aa27.5■■□□□ 1.99
THSD4-207ENST00000620694 CUL4AQ13619 759 aa27.5■■□□□ 1.99
THSD4-207ENST00000620694 PDXDC2PQ6P474 469 aa27.5■■□□□ 1.99
THSD4-207ENST00000620694 LMBR1Q8WVP7 490 aa27.5■■□□□ 1.99
THSD4-207ENST00000620694 DHX38Q92620 1227 aaKnown RBP27.5■■□□□ 1.99
THSD4-207ENST00000620694 UNC45AQ9H3U1 944 aa27.5■■□□□ 1.99
THSD4-207ENST00000620694 KCNMB3Q9NPA1 279 aa27.5■■□□□ 1.99
THSD4-207ENST00000620694 DISC1Q9NRI5 854 aa27.5■■□□□ 1.99
THSD4-207ENST00000620694 TBX3O15119 743 aa27.49■■□□□ 1.99
THSD4-207ENST00000620694 TREHO43280 583 aa27.49■■□□□ 1.99
THSD4-207ENST00000620694 SFNP31947 248 aa27.49■■□□□ 1.99
THSD4-207ENST00000620694 JAK3P52333 1124 aa27.49■■□□□ 1.99
THSD4-207ENST00000620694 PLCB4Q15147 1175 aa27.49■■□□□ 1.99
THSD4-207ENST00000620694 GRIK4Q16099 956 aa27.49■■□□□ 1.99
THSD4-207ENST00000620694 SERINC5Q86VE9 423 aa27.49■■□□□ 1.99
THSD4-207ENST00000620694 POTEDQ86YR6 584 aa27.49■■□□□ 1.99
THSD4-207ENST00000620694 SCLYQ96I15 445 aa27.49■■□□□ 1.99
THSD4-207ENST00000620694 ATP2B1P20020 1258 aa27.48■■□□□ 1.99
THSD4-207ENST00000620694 GABBR1Q9UBS5 961 aa27.48■■□□□ 1.99
THSD4-207ENST00000620694 POTEB3A0JP26 581 aa27.47■■□□□ 1.99
THSD4-207ENST00000620694 BAG4O95429 457 aaKnown RBP27.47■■□□□ 1.99
THSD4-207ENST00000620694 IQCF3P0C7M6 154 aa27.47■■□□□ 1.99
THSD4-207ENST00000620694 INSRRP14616 1297 aa27.47■■□□□ 1.99
THSD4-207ENST00000620694 RBL2Q08999 1139 aa27.47■■□□□ 1.99
THSD4-207ENST00000620694 SHHQ15465 462 aa27.47■■□□□ 1.99
THSD4-207ENST00000620694 POTEBQ6S5H4 581 aa27.47■■□□□ 1.99
THSD4-207ENST00000620694 MIER3Q7Z3K6 550 aa27.47■■□□□ 1.99
THSD4-207ENST00000620694 NOSTRINQ8IVI9 506 aa27.47■■□□□ 1.99
THSD4-207ENST00000620694 CKAP2LQ8IYA6 745 aa27.47■■□□□ 1.99
THSD4-207ENST00000620694 RDM1Q8NG50 284 aa27.47■■□□□ 1.99
THSD4-207ENST00000620694 IL23AQ9NPF7 189 aa27.47■■□□□ 1.99
THSD4-207ENST00000620694 MAFBQ9Y5Q3 323 aaPredicted RBP27.47■■□□□ 1.99
THSD4-207ENST00000620694 RRN3P2A6NIE6 340 aa27.46■■□□□ 1.99
THSD4-207ENST00000620694 H3BQV1 296 aa27.46■■□□□ 1.99
THSD4-207ENST00000620694 ACRP10323 421 aa27.46■■□□□ 1.99
THSD4-207ENST00000620694 CKBP12277 381 aa27.46■■□□□ 1.99
THSD4-207ENST00000620694 SELPP16109 830 aa27.46■■□□□ 1.99
THSD4-207ENST00000620694 IGBP1P78318 339 aa27.46■■□□□ 1.99
THSD4-207ENST00000620694 ADAM17P78536 824 aa27.46■■□□□ 1.99
THSD4-207ENST00000620694 TRIM71Q2Q1W2 868 aaKnown RBP27.46■■□□□ 1.99
THSD4-207ENST00000620694 C9orf50Q5SZB4 431 aa27.46■■□□□ 1.99
THSD4-207ENST00000620694 SLFN12Q8IYM2 578 aa27.46■■□□□ 1.99
THSD4-207ENST00000620694 RPUSD2Q8IZ73 545 aaKnown RBP27.46■■□□□ 1.99
THSD4-207ENST00000620694 ATP8B4Q8TF62 1192 aa27.46■■□□□ 1.99
THSD4-207ENST00000620694 HAS1Q92839 578 aa27.46■■□□□ 1.99
THSD4-207ENST00000620694 WNT8BQ93098 351 aa27.46■■□□□ 1.99
THSD4-207ENST00000620694 KIF28PB7ZC32 967 aa27.45■■□□□ 1.98
THSD4-207ENST00000620694 K7ELQ4 463 aaPredicted RBP27.45■■□□□ 1.98
THSD4-207ENST00000620694 WNT7AO00755 349 aa27.45■■□□□ 1.98
THSD4-207ENST00000620694 HBP1O60381 514 aa27.45■■□□□ 1.98
THSD4-207ENST00000620694 NEMFO60524 1076 aa27.45■■□□□ 1.98
THSD4-207ENST00000620694 RFC2P35250 354 aa27.45■■□□□ 1.98
THSD4-207ENST00000620694 THPOP40225 353 aa27.45■■□□□ 1.98
THSD4-207ENST00000620694 CALCRLQ16602 461 aa27.45■■□□□ 1.98
THSD4-207ENST00000620694 B3GNT9Q6UX72 402 aa27.45■■□□□ 1.98
THSD4-207ENST00000620694 LRRC8DQ7L1W4 858 aa27.45■■□□□ 1.98
THSD4-207ENST00000620694 TUBE1Q9UJT0 475 aa27.45■■□□□ 1.98
THSD4-207ENST00000620694 NOL7Q9UMY1 257 aaKnown RBP27.45■■□□□ 1.98
THSD4-207ENST00000620694 U2AF2P26368 475 aaKnown RBP eCLIP27.44■■□□□ 1.98
THSD4-207ENST00000620694 MCTP1Q6DN14 999 aa27.44■■□□□ 1.98
THSD4-207ENST00000620694 PSRC1Q6PGN9 363 aaPredicted RBP27.44■■□□□ 1.98
THSD4-207ENST00000620694 C16orf59Q7L2K0 433 aa27.44■■□□□ 1.98
THSD4-207ENST00000620694 SNX21Q969T3 373 aa27.44■■□□□ 1.98
THSD4-207ENST00000620694 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.44■■□□□ 1.98
THSD4-207ENST00000620694 VAV3Q9UKW4 847 aa27.44■■□□□ 1.98
THSD4-207ENST00000620694 IGSF9BQ9UPX0 1349 aa27.43■■□□□ 1.98
THSD4-207ENST00000620694 MCM7P33993 719 aa27.43■■□□□ 1.98
THSD4-207ENST00000620694 PPP2R5CQ13362 524 aa27.43■■□□□ 1.98
THSD4-207ENST00000620694 LARP1BQ659C4 914 aaKnown RBP27.43■■□□□ 1.98
THSD4-207ENST00000620694 TAF2Q6P1X5 1199 aa27.43■■□□□ 1.98
THSD4-207ENST00000620694 DEFB128Q7Z7B8 93 aa27.43■■□□□ 1.98
THSD4-207ENST00000620694 RNPC3Q96LT9 517 aaKnown RBP27.43■■□□□ 1.98
THSD4-207ENST00000620694 MBLAC1A4D2B0 266 aaPredicted RBP27.42■■□□□ 1.98
THSD4-207ENST00000620694 PARNO95453 639 aaKnown RBP27.42■■□□□ 1.98
THSD4-207ENST00000620694 PFKMP08237 780 aa27.42■■□□□ 1.98
THSD4-207ENST00000620694 ATP4AP20648 1035 aa27.42■■□□□ 1.98
THSD4-207ENST00000620694 TRAPPC10P48553 1259 aa27.42■■□□□ 1.98
THSD4-207ENST00000620694 TMEM240Q5SV17 173 aa27.42■■□□□ 1.98
THSD4-207ENST00000620694 MARCH8Q5T0T0 291 aa27.42■■□□□ 1.98
THSD4-207ENST00000620694 ZNF618Q5T7W0 954 aa27.42■■□□□ 1.98
THSD4-207ENST00000620694 ZNF365Q70YC5 407 aa27.42■■□□□ 1.98
THSD4-207ENST00000620694 TRMT1LQ7Z2T5 733 aaKnown RBP27.42■■□□□ 1.98
THSD4-207ENST00000620694 BBXQ8WY36 941 aaPredicted RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms