RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 COBLL1Q53SF7 1204 aa10.87□□□□□ -0.67
CDH23-213ENST00000619887 DCAF15Q66K64 600 aa10.87□□□□□ -0.67
CDH23-213ENST00000619887 COL23A1Q86Y22 540 aaPredicted RBP10.87□□□□□ -0.67
CDH23-213ENST00000619887 DHX37Q8IY37 1157 aaKnown RBP10.87□□□□□ -0.67
CDH23-213ENST00000619887 FAM133AQ8N9E0 248 aa10.87□□□□□ -0.67
CDH23-213ENST00000619887 MPHOSPH6Q99547 160 aaKnown RBP10.87□□□□□ -0.67
CDH23-213ENST00000619887 DUSP9Q99956 384 aaKnown RBP10.87□□□□□ -0.67
CDH23-213ENST00000619887 MYH15Q9Y2K3 1946 aa10.87□□□□□ -0.67
CDH23-213ENST00000619887 COL16A1Q07092 1604 aaPredicted RBP10.87□□□□□ -0.67
CDH23-213ENST00000619887 C21orf2O43822 256 aa10.87□□□□□ -0.67
CDH23-213ENST00000619887 NR3C1P04150 777 aa10.87□□□□□ -0.67
CDH23-213ENST00000619887 STAT3P40763 770 aa10.87□□□□□ -0.67
CDH23-213ENST00000619887 PPP2R5EQ16537 467 aa10.87□□□□□ -0.67
CDH23-213ENST00000619887 NLRX1Q86UT6 975 aa10.87□□□□□ -0.67
CDH23-213ENST00000619887 GMCL1P1Q8NEA9 526 aa10.87□□□□□ -0.67
CDH23-213ENST00000619887 U2AF1L4Q8WU68 220 aaKnown RBP10.87□□□□□ -0.67
CDH23-213ENST00000619887 IDI2Q9BXS1 227 aa10.87□□□□□ -0.67
CDH23-213ENST00000619887 AS3MTQ9HBK9 375 aa10.87□□□□□ -0.67
CDH23-213ENST00000619887 GINS2Q9Y248 185 aa10.87□□□□□ -0.67
CDH23-213ENST00000619887 TARSL2A2RTX5 802 aaKnown RBP10.86□□□□□ -0.67
CDH23-213ENST00000619887 DESP17661 470 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 PMS1P54277 932 aaKnown RBP10.86□□□□□ -0.67
CDH23-213ENST00000619887 CASP8Q14790 479 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 ARFGAP2Q8N6H7 521 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 KIFAP3Q92845 792 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 LRRC45Q96CN5 670 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 PNMA5Q96PV4 448 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 TMEM206Q9H813 350 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 GCNT4Q9P109 453 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 AMFRQ9UKV5 643 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 CICQ96RK0 1608 aaPredicted RBP10.86□□□□□ -0.67
CDH23-213ENST00000619887 DDX60Q8IY21 1712 aaKnown RBP10.86□□□□□ -0.67
CDH23-213ENST00000619887 CCDC88AQ3V6T2 1871 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 USP14P54578 494 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 APOBEC3HQ6NTF7 200 aaKnown RBP10.86□□□□□ -0.67
CDH23-213ENST00000619887 RUBCNQ92622 972 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 SYN2Q92777 582 aaPredicted RBP10.86□□□□□ -0.67
CDH23-213ENST00000619887 EIF2AK1Q9BQI3 630 aaKnown RBP10.86□□□□□ -0.67
CDH23-213ENST00000619887 SEMA6BQ9H3T3 888 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 CCDC169A6NNP5 214 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 CTNNA2P26232 953 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 ANXA13P27216 316 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 GABPAQ06546 454 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 OTUD6AQ7L8S5 288 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 DPH6Q7L8W6 267 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 KIAA0895Q8NCT3 520 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 IFT74Q96LB3 600 aa10.86□□□□□ -0.67
CDH23-213ENST00000619887 GOLGA6CA6NDK9 693 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 SLC16A3O15427 465 aaKnown RBP10.85□□□□□ -0.67
CDH23-213ENST00000619887 ATP1A1P05023 1023 aaKnown RBP10.85□□□□□ -0.67
CDH23-213ENST00000619887 GOLGA6DP0CG33 693 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 SNHG28P0DPA3 235 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 CTTNQ14247 550 aaKnown RBP10.85□□□□□ -0.67
CDH23-213ENST00000619887 RSRC2Q7L4I2 434 aaKnown RBP10.85□□□□□ -0.67
CDH23-213ENST00000619887 HNRNPLLQ8WVV9 542 aaKnown RBP10.85□□□□□ -0.67
CDH23-213ENST00000619887 EXOC4Q96A65 974 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 BLOC1S4Q9NUP1 217 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 GOLGA6AQ9NYA3 693 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 PRR12Q9ULL5 1215 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 KCNK3O14649 394 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 CLIC2O15247 247 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 NEBLO76041 1014 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 EPHB4P54760 987 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 MYL7Q01449 175 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 GLE1Q53GS7 698 aaKnown RBP10.85□□□□□ -0.67
CDH23-213ENST00000619887 UBL4BQ8N7F7 174 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 FAM151AQ8WW52 585 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 MKL1Q969V6 931 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 ACCSQ96QU6 501 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 MTRQ99707 1265 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 BCCIPQ9P287 314 aaKnown RBP eCLIP10.85□□□□□ -0.67
CDH23-213ENST00000619887 NPM3O75607 178 aaKnown RBP10.85□□□□□ -0.67
CDH23-213ENST00000619887 SREBF1P36956 1147 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 UBXN2AP68543 259 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 APBA1Q02410 837 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 FOXR2Q6PJQ5 311 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 MICALCLQ6ZW33 695 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 PBKQ96KB5 322 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 POLR3CQ9BUI4 534 aaPredicted RBP10.85□□□□□ -0.67
CDH23-213ENST00000619887 EPC1Q9H2F5 836 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 TMOD4Q9NZQ9 345 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 SYNPO2Q9UMS6 1093 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 CYP11B2P19099 503 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 EHHADHQ08426 723 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 MEA1Q16626 185 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 SEL1L2Q5TEA6 688 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 ADAMTS1Q9UHI8 967 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 MTUS1Q9ULD2 1270 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 SNX12Q9UMY4 172 aa10.85□□□□□ -0.67
CDH23-213ENST00000619887 MYH14Q7Z406 1995 aaKnown RBP10.84□□□□□ -0.67
CDH23-213ENST00000619887 H0YCG3 227 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 GJC1P36383 396 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 C2orf54Q08AI8 447 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 EPHA7Q15375 998 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 ARHGEF16Q5VV41 709 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 CERS5Q8N5B7 392 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 ZNF507Q8TCN5 953 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 M0R2N6 131 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 CHRNA5P30532 468 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 ARHGAP44Q17R89 818 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms