RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 PRR16Q569H4 304 aa17.8■□□□□ 0.44
LINC00221-202ENST00000619530 TMCO2Q7Z6W1 182 aaPredicted RBP17.8■□□□□ 0.44
LINC00221-202ENST00000619530 SNX21Q969T3 373 aa17.8■□□□□ 0.44
LINC00221-202ENST00000619530 ZNF577Q9BSK1 485 aa17.8■□□□□ 0.44
LINC00221-202ENST00000619530 TRPC6Q9Y210 931 aa17.8■□□□□ 0.44
LINC00221-202ENST00000619530 PCDHA11Q9Y5I1 949 aa17.8■□□□□ 0.44
LINC00221-202ENST00000619530 IGLV3-22A0A075B6J6 115 aa17.79■□□□□ 0.44
LINC00221-202ENST00000619530 LGR5O75473 907 aa17.79■□□□□ 0.44
LINC00221-202ENST00000619530 BAIAP3O94812 1187 aa17.79■□□□□ 0.44
LINC00221-202ENST00000619530 STAT5BP51692 787 aa17.79■□□□□ 0.44
LINC00221-202ENST00000619530 AK2P54819 239 aa17.79■□□□□ 0.44
LINC00221-202ENST00000619530 IKBKEQ14164 716 aa17.79■□□□□ 0.44
LINC00221-202ENST00000619530 GRIK4Q16099 956 aa17.79■□□□□ 0.44
LINC00221-202ENST00000619530 RUFY4Q6ZNE9 571 aa17.79■□□□□ 0.44
LINC00221-202ENST00000619530 HERC6Q8IVU3 1022 aa17.79■□□□□ 0.44
LINC00221-202ENST00000619530 SLC9A7Q96T83 725 aa17.79■□□□□ 0.44
LINC00221-202ENST00000619530 IPO5O00410 1097 aaKnown RBP17.78■□□□□ 0.44
LINC00221-202ENST00000619530 BACH1O14867 736 aa17.78■□□□□ 0.44
LINC00221-202ENST00000619530 CCNE2O96020 404 aa17.78■□□□□ 0.44
LINC00221-202ENST00000619530 INSRRP14616 1297 aa17.78■□□□□ 0.44
LINC00221-202ENST00000619530 WDR5P61964 334 aaKnown RBP17.78■□□□□ 0.44
LINC00221-202ENST00000619530 PPP2R2DQ66LE6 453 aa17.78■□□□□ 0.44
LINC00221-202ENST00000619530 MAFAQ8NHW3 353 aaPredicted RBP17.78■□□□□ 0.44
LINC00221-202ENST00000619530 PHOSPHO2Q8TCD6 241 aa17.78■□□□□ 0.44
LINC00221-202ENST00000619530 CRYGNQ8WXF5 182 aa17.78■□□□□ 0.44
LINC00221-202ENST00000619530 ZBTB10Q96DT7 871 aa17.78■□□□□ 0.44
LINC00221-202ENST00000619530 ZBED2Q9BTP6 218 aa17.78■□□□□ 0.44
LINC00221-202ENST00000619530 OSBPL7Q9BZF2 842 aa17.78■□□□□ 0.44
LINC00221-202ENST00000619530 PCDHA4Q9UN74 947 aa17.78■□□□□ 0.44
LINC00221-202ENST00000619530 EMSYQ7Z589 1322 aa17.78■□□□□ 0.44
LINC00221-202ENST00000619530 KIF28PB7ZC32 967 aa17.77■□□□□ 0.44
LINC00221-202ENST00000619530 PFKFB2O60825 505 aa17.77■□□□□ 0.44
LINC00221-202ENST00000619530 ADAM17P78536 824 aa17.77■□□□□ 0.44
LINC00221-202ENST00000619530 DEFB103AP81534 67 aa17.77■□□□□ 0.44
LINC00221-202ENST00000619530 ANKRD1Q15327 319 aa17.77■□□□□ 0.44
LINC00221-202ENST00000619530 FAM117BQ6P1L5 589 aa17.77■□□□□ 0.44
LINC00221-202ENST00000619530 BLIDQ8IZY5 108 aa17.77■□□□□ 0.44
LINC00221-202ENST00000619530 NECAB1Q8N987 351 aa17.77■□□□□ 0.44
LINC00221-202ENST00000619530 DBF4BQ8NFT6 615 aa17.77■□□□□ 0.44
LINC00221-202ENST00000619530 TUBE1Q9UJT0 475 aa17.77■□□□□ 0.44
LINC00221-202ENST00000619530 KCNJ14Q9UNX9 436 aa17.77■□□□□ 0.44
LINC00221-202ENST00000619530 ABHD14A-ACY1A0A1B0GW23 586 aa17.76■□□□□ 0.43
LINC00221-202ENST00000619530 DHX15O43143 795 aaKnown RBP17.76■□□□□ 0.43
LINC00221-202ENST00000619530 CDKL5O76039 1030 aa17.76■□□□□ 0.43
LINC00221-202ENST00000619530 CA3P07451 260 aa17.76■□□□□ 0.43
LINC00221-202ENST00000619530 NEK4P51957 841 aa17.76■□□□□ 0.43
LINC00221-202ENST00000619530 PLCB4Q15147 1175 aa17.76■□□□□ 0.43
LINC00221-202ENST00000619530 MARCH8Q5T0T0 291 aa17.76■□□□□ 0.43
LINC00221-202ENST00000619530 SWSAP1Q6NVH7 229 aa17.76■□□□□ 0.43
LINC00221-202ENST00000619530 MIS18BP1Q6P0N0 1132 aa17.76■□□□□ 0.43
LINC00221-202ENST00000619530 PLPPR4Q7Z2D5 763 aa17.76■□□□□ 0.43
LINC00221-202ENST00000619530 TRMT1LQ7Z2T5 733 aaKnown RBP17.76■□□□□ 0.43
LINC00221-202ENST00000619530 TRAPPC12Q8WVT3 735 aa17.76■□□□□ 0.43
LINC00221-202ENST00000619530 DNAJB3Q8WWF6 145 aa17.76■□□□□ 0.43
LINC00221-202ENST00000619530 PPM1EQ8WY54 764 aa17.76■□□□□ 0.43
LINC00221-202ENST00000619530 CERS4Q9HA82 394 aa17.76■□□□□ 0.43
LINC00221-202ENST00000619530 TCEAL9Q9UHQ7 104 aa17.76■□□□□ 0.43
LINC00221-202ENST00000619530 POTEB3A0JP26 581 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 RRN3P2A6NIE6 340 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 TLL1O43897 1013 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 ATG7O95352 703 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 IGFBP4P22692 258 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 SETQ01105 290 aaPredicted RBP17.75■□□□□ 0.43
LINC00221-202ENST00000619530 FAM160B1Q5W0V3 765 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 POTEBQ6S5H4 581 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 ABHD15Q6UXT9 468 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.75■□□□□ 0.43
LINC00221-202ENST00000619530 RSPH3Q86UC2 560 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 TBCKQ8TEA7 893 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 SEPT8Q92599 483 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 TNPO1Q92973 898 aaKnown RBP17.75■□□□□ 0.43
LINC00221-202ENST00000619530 GAS2L1Q99501 681 aaPredicted RBP17.75■□□□□ 0.43
LINC00221-202ENST00000619530 FAM49AQ9H0Q0 323 aaPredicted RBP17.75■□□□□ 0.43
LINC00221-202ENST00000619530 ZNF302Q9NR11 478 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 TBC1D22BQ9NU19 505 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 EDIL3O43854 480 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 CAND2O75155 1236 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 CHRNA1P02708 482 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 CIITAP33076 1130 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 USP11P51784 963 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 PLEKHG4Q58EX7 1191 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 TAF2Q6P1X5 1199 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 PDXDC2PQ6P474 469 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 CKAP2LQ8IYA6 745 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 SAMM50Q9Y512 469 aa17.75■□□□□ 0.43
LINC00221-202ENST00000619530 CTDNEP1O95476 244 aa17.74■□□□□ 0.43
LINC00221-202ENST00000619530 FAM26DQ5JW98 314 aa17.74■□□□□ 0.43
LINC00221-202ENST00000619530 GJA10Q969M2 543 aa17.74■□□□□ 0.43
LINC00221-202ENST00000619530 GJB4Q9NTQ9 266 aa17.74■□□□□ 0.43
LINC00221-202ENST00000619530 CDH23Q9H251 3354 aa17.73■□□□□ 0.43
LINC00221-202ENST00000619530 IGKV6D-21A0A0A0MT36 114 aa17.73■□□□□ 0.43
LINC00221-202ENST00000619530 RFXAPO00287 272 aa17.73■□□□□ 0.43
LINC00221-202ENST00000619530 MSH4O15457 936 aa17.73■□□□□ 0.43
LINC00221-202ENST00000619530 EFCAB14O75071 495 aa17.73■□□□□ 0.43
LINC00221-202ENST00000619530 LARGE1O95461 756 aa17.73■□□□□ 0.43
LINC00221-202ENST00000619530 AMHP03971 560 aa17.73■□□□□ 0.43
LINC00221-202ENST00000619530 GHRP10912 638 aa17.73■□□□□ 0.43
LINC00221-202ENST00000619530 TMEM62Q0P6H9 643 aa17.73■□□□□ 0.43
LINC00221-202ENST00000619530 ME3Q16798 604 aa17.73■□□□□ 0.43
LINC00221-202ENST00000619530 CCDC60Q8IWA6 550 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms