RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 USP17L8P0C7I0 530 aa14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 IKQ13123 557 aaPredicted RBP14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 DCAF17Q5H9S7 520 aaPredicted RBP14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 IQCKQ8N0W5 287 aa14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 ANKS4BQ8N8V4 417 aa14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 NOD2Q9HC29 1040 aa14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 CNOT8Q9UFF9 292 aaKnown RBP14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 MYH13Q9UKX3 1938 aa14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 LONP1P36776 959 aaKnown RBP14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 ERVK-9P63128 1117 aa14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 RUFY4Q6ZNE9 571 aa14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 PRCCQ92733 491 aaPredicted RBP14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 KCNK9Q9NPC2 374 aa14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 DNAJC17Q9NVM6 304 aaKnown RBP14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 SAMD15Q9P1V8 674 aa14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 LY75O60449 1722 aa14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 ITGA4P13612 1032 aa14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 PPP2R2AP63151 447 aa14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 R3HDM1Q15032 1099 aaKnown RBP14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 LRRC45Q96CN5 670 aa14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 PYM1Q9BRP8 204 aaKnown RBP14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 ZBTB12Q9Y330 459 aaPredicted RBP14.98□□□□□ -0.01
CNTNAP3B-215ENST00000619138 A6NNZ2 444 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 TTI1O43156 1089 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 HOXA10P31260 410 aaPredicted RBP14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 BTDP43251 543 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 PLTPP55058 493 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 GSTO1P78417 241 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 TUBB8Q3ZCM7 444 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 NAALADL2Q58DX5 795 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 ANKRD20A8PQ5CZ79 823 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 FMNL3Q8IVF7 1028 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 CCDC197Q8NCU1 140 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 SH3RF3Q8TEJ3 882 aaPredicted RBP14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 ZBTB10Q96DT7 871 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 TSG101Q99816 390 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 CHRM1P11229 460 aaPredicted RBP14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 MEA1Q16626 185 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 PEX26Q7Z412 305 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 SART1O43290 800 aaKnown RBP14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 ITGB3BPQ13352 177 aaPredicted RBP14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 ZNF211Q13398 564 aaPredicted RBP14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 SV2BQ7L1I2 683 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 EYA3Q99504 573 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 TAF1DQ9H5J8 278 aaPredicted RBP14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 PLAGL2Q9UPG8 496 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 SCN7AQ01118 1682 aa14.97□□□□□ -0.01
CNTNAP3B-215ENST00000619138 BCORQ6W2J9 1755 aa14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 A0A087X0T9 212 aa14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 MMEP08473 750 aa14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 FAM228BP0C875 321 aa14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 ACTN1P12814 892 aa14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 FECHP22830 423 aa14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 TFAP4Q01664 338 aa14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 RETREG2Q8NC44 543 aa14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 CNKSR1Q969H4 720 aa14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 DYNLL2Q96FJ2 89 aa14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 DHTKD1Q96HY7 919 aaPredicted RBP14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 KCNQ5Q9NR82 932 aa14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 RBM28Q9NW13 759 aaKnown RBP14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 ARPP21Q9UBL0 812 aaPredicted RBP14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 COL1A1P02452 1464 aaPredicted RBP14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 CNNM4Q6P4Q7 775 aa14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 ZSCAN29Q8IWY8 852 aaPredicted RBP14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 GIMAP8Q8ND71 665 aaPredicted RBP14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 TRIM9Q9C026 710 aa14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 SEMA6BQ9H3T3 888 aa14.96□□□□□ -0.01
CNTNAP3B-215ENST00000619138 SRCAPQ6ZRS2 3230 aa14.96□□□□□ -0.02
CNTNAP3B-215ENST00000619138 PPIP5K2O43314 1243 aa14.96□□□□□ -0.02
CNTNAP3B-215ENST00000619138 CCNHP51946 323 aaPredicted RBP14.96□□□□□ -0.02
CNTNAP3B-215ENST00000619138 AMPD3Q01432 767 aa14.96□□□□□ -0.02
CNTNAP3B-215ENST00000619138 AOC3Q16853 763 aa14.96□□□□□ -0.02
CNTNAP3B-215ENST00000619138 ZNF384Q8TF68 577 aa14.96□□□□□ -0.02
CNTNAP3B-215ENST00000619138 PPP1R12CQ9BZL4 782 aa14.96□□□□□ -0.02
CNTNAP3B-215ENST00000619138 NEUROG2Q9H2A3 272 aa14.96□□□□□ -0.02
CNTNAP3B-215ENST00000619138 ACTR5Q9H9F9 607 aaPredicted RBP14.96□□□□□ -0.02
CNTNAP3B-215ENST00000619138 LRRC4CQ9HCJ2 640 aa14.96□□□□□ -0.02
CNTNAP3B-215ENST00000619138 CPSF2Q9P2I0 782 aaKnown RBP14.96□□□□□ -0.02
CNTNAP3B-215ENST00000619138 KCNG1Q9UIX4 513 aa14.96□□□□□ -0.02
CNTNAP3B-215ENST00000619138 POTEMA6NI47 508 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 CALML3P27482 149 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 MMP14P50281 582 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 SATB1Q01826 763 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 TROAPQ12815 778 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 MIIPQ5JXC2 388 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 CCDC84Q86UT8 332 aaPredicted RBP14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 WHAMMQ8TF30 809 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 RIOK1Q9BRS2 568 aaKnown RBP14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 TMBIM4Q9HC24 238 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 MYO5AQ9Y4I1 1855 aaKnown RBP14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 RREB1Q92766 1687 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 USP17L3A6NCW0 530 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 USP17L4A6NCW7 530 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 SPDYE3A6NKU9 549 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 SLC8A1P32418 973 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 ASIC2Q16515 512 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 USP17L1Q7RTZ2 530 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 CAVIN3Q969G5 261 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 SNX24Q9Y343 169 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms