RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 IFT81Q8WYA0 676 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 TUBGCP2Q9BSJ2 902 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 DEFB129Q9H1M3 183 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 NHEJ1Q9H9Q4 299 aaPredicted RBP7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 C6orf50Q9HD87 102 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 NYAP2Q9P242 653 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 HYOU1Q9Y4L1 999 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 GOLGA6L7A0A1B0GV03 622 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 DDNO94850 711 aaPredicted RBP7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 PPP1R2P41236 205 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 ARHGAP25P42331 645 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 ZBED6P86452 979 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 PRKG1Q13976 671 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 ANGEL2Q5VTE6 544 aaKnown RBP7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 DPH6Q7L8W6 267 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 CCDC84Q86UT8 332 aaPredicted RBP7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 IFT20Q8IY31 132 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 COA7Q96BR5 231 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 SPZ1Q9BXG8 430 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 THAP9Q9H5L6 903 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 COL4A5P29400 1685 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 UTRNP46939 3433 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 IGKV6D-41A0A0C4DH26 115 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 A0A1W2PQC6 194 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 MAPK1P28482 360 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 GNA11P29992 359 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 PRCPP42785 496 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 AARSP49588 968 aaKnown RBP eCLIP7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 CYP27A1Q02318 531 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 TTC19Q6DKK2 380 aaPredicted RBP7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 TYW1BQ6NUM6 668 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 PACS2Q86VP3 889 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 SPATS2Q86XZ4 545 aaKnown RBP7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 SPATA20Q8TB22 786 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 LRRN4Q8WUT4 740 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 IQCDQ96DY2 449 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 CAPN7Q9Y6W3 813 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 MYH1P12882 1939 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 NAV1Q8NEY1 1877 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 USP17L10C9JJH3 530 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 PBX1P40424 430 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 ZNF280AP59817 542 aaPredicted RBP7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 PAK2Q13177 524 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 RRP1BQ14684 758 aaKnown RBP7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 CCNI2Q6ZMN8 369 aaPredicted RBP7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 CAPN10Q9HC96 672 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 BARHL2Q9NY43 387 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 ZBTB21Q9ULJ3 1066 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 CAPN11Q9UMQ6 739 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 PCDHA4Q9UN74 947 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 C2orf72A6NCS6 295 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 TRIM49BA6NDI0 452 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 NDUFB10O96000 172 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 GUCY2CP25092 1073 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 ECE1P42892 770 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 MAGEA1P43355 309 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 NOP2P46087 812 aaKnown RBP7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 ATP2C1P98194 919 aaPredicted RBP7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 ILDR2Q71H61 639 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 ADGRF4Q8IZF3 695 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 ARFGAP2Q8N6H7 521 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 ACER1Q8TDN7 264 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 EEF2KMTQ96G04 330 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 CALML4Q96GE6 196 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 TSG101Q99816 390 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 SAMM50Q9Y512 469 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 ATRNL1Q5VV63 1379 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 ASNSP08243 561 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 BMP3P12645 472 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 MAP2K2P36507 400 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 ATP1A2P50993 1020 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 IRAK1P51617 712 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 SNAP25P60880 206 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 JAG1P78504 1218 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 SLC35G1Q2M3R5 365 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 CFAP221Q4G0U5 840 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 EARS2Q5JPH6 523 aaKnown RBP7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 ALS2CLQ60I27 953 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 EMBQ6PCB8 327 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 GPC2Q8N158 579 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 RDH13Q8NBN7 331 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 NOX5Q96PH1 765 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 LRWD1Q9UFC0 647 aa7.68□□□□□ -1.18
SRGAP3-213ENST00000618999 A0A087X0B3 334 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 MMP14P50281 582 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 NBPF12Q5TAG4 269 aaPredicted RBP7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 PAPD7Q5XG87 772 aaKnown RBP7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 TRPM4Q8TD43 1214 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 EPS8L1Q8TE68 723 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 CNOT6LQ96LI5 555 aaKnown RBP7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 MED15Q96RN5 788 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 YY1AP1Q9H869 796 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 JMJD4Q9H9V9 463 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 SH3GLB2Q9NR46 395 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 FAM207AQ9NSI2 230 aaPredicted RBP7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 GGA3Q9NZ52 723 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 CNTNAP1P78357 1384 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 PLIN4Q96Q06 1357 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 STXBP3O00186 592 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms