RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 BFSP2Q13515 415 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 HIC1Q14526 733 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 LETM2Q2VYF4 491 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 HSDL1Q3SXM5 330 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 Q4G0T1 1027 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 PRR16Q569H4 304 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 LARP1BQ659C4 914 aaKnown RBP5.93□□□□□ -1.46
SHMT1-211ENST00000618902 FAM173BQ6P4H8 233 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 B3GNT9Q6UX72 402 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 CHRDL2Q6WN34 429 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 MTERF4Q7Z6M4 381 aaKnown RBP5.93□□□□□ -1.46
SHMT1-211ENST00000618902 NEK8Q86SG6 692 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 RPAINQ86UA6 219 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 FERMT3Q86UX7 667 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 ZSCAN30Q86W11 494 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 TRIM50Q86XT4 487 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 POTEDQ86YR6 584 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 NOSTRINQ8IVI9 506 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 FAM126BQ8IXS8 530 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 DHX37Q8IY37 1157 aaKnown RBP5.93□□□□□ -1.46
SHMT1-211ENST00000618902 C4orf32Q8N8J7 132 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 SPOCK2Q92563 424 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 SLC5A5Q92911 643 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 VTI1AQ96AJ9 217 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 CHAMP1Q96JM3 812 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 GPR20Q99678 358 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 NAP1L4Q99733 375 aaKnown RBP5.93□□□□□ -1.46
SHMT1-211ENST00000618902 UBE2OQ9C0C9 1292 aaKnown RBP5.93□□□□□ -1.46
SHMT1-211ENST00000618902 FOXP1Q9H334 677 aaPredicted RBP5.93□□□□□ -1.46
SHMT1-211ENST00000618902 KCNMB3Q9NPA1 279 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 PDLIM7Q9NR12 457 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 LMBRD1Q9NUN5 540 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 TBX21Q9UL17 535 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 ZNF215Q9UL58 517 aaPredicted RBP5.93□□□□□ -1.46
SHMT1-211ENST00000618902 ATP11BQ9Y2G3 1177 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 ZDHHC9Q9Y397 364 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 NFASCO94856 1347 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 EMSYQ7Z589 1322 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 TRIP12Q14669 1992 aaPredicted RBP5.93□□□□□ -1.46
SHMT1-211ENST00000618902 DDX39AO00148 427 aaKnown RBP5.92□□□□□ -1.46
SHMT1-211ENST00000618902 HAS3O00219 553 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 IPO5O00410 1097 aaKnown RBP5.92□□□□□ -1.46
SHMT1-211ENST00000618902 EML1O00423 815 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 PSMD10O75832 226 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 BAIAP3O94812 1187 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 BRD1O95696 1058 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 F2P00734 622 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 TPM3P06753 285 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 MYL3P08590 195 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 ZNF286BP0CG31 522 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 MSNP26038 577 aaKnown RBP5.92□□□□□ -1.46
SHMT1-211ENST00000618902 ZNF76P36508 570 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 ATN1P54259 1190 aaPredicted RBP5.92□□□□□ -1.46
SHMT1-211ENST00000618902 SPIRE1Q08AE8 756 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 MTMR1Q13613 665 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 TRIM29Q14134 588 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 ZNF174Q15697 407 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 IL17AQ16552 155 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 TRIM60Q495X7 471 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 PPP4R3AQ6IN85 833 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 MOXD1Q6UVY6 613 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 ABHD15Q6UXT9 468 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 PHOSPHO2Q8TCD6 241 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 AFAP1L1Q8TED9 768 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 SPATA33Q96N06 139 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 MTMR9Q96QG7 549 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 CTAGE1Q96RT6 745 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 MAP7D2Q96T17 732 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 C16orf70Q9BSU1 422 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 FTOQ9C0B1 505 aaKnown RBP eCLIP5.92□□□□□ -1.46
SHMT1-211ENST00000618902 UNC45AQ9H3U1 944 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 MLXIPQ9HAP2 919 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 TBC1D22BQ9NU19 505 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 DDX25Q9UHL0 483 aaKnown RBP5.92□□□□□ -1.46
SHMT1-211ENST00000618902 VAV3Q9UKW4 847 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 PCDHB6Q9Y5E3 794 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 BDP1A6H8Y1 2624 aa5.92□□□□□ -1.46
SHMT1-211ENST00000618902 IGKV6D-21A0A0A0MT36 114 aa5.91□□□□□ -1.46
SHMT1-211ENST00000618902 VPS37CA5D8V6 355 aaPredicted RBP5.91□□□□□ -1.46
SHMT1-211ENST00000618902 H3BQV1 296 aa5.91□□□□□ -1.46
SHMT1-211ENST00000618902 NOP56O00567 594 aaKnown RBP5.91□□□□□ -1.46
SHMT1-211ENST00000618902 STX6O43752 255 aa5.91□□□□□ -1.46
SHMT1-211ENST00000618902 CCNT1O60563 726 aaKnown RBP5.91□□□□□ -1.46
SHMT1-211ENST00000618902 PQBP1O60828 265 aaKnown RBP5.91□□□□□ -1.46
SHMT1-211ENST00000618902 LGR5O75473 907 aa5.91□□□□□ -1.46
SHMT1-211ENST00000618902 STBD1O95210 358 aa5.91□□□□□ -1.46
SHMT1-211ENST00000618902 ATG7O95352 703 aa5.91□□□□□ -1.46
SHMT1-211ENST00000618902 LGALS2P05162 132 aa5.91□□□□□ -1.46
SHMT1-211ENST00000618902 ACTN1P12814 892 aa5.91□□□□□ -1.46
SHMT1-211ENST00000618902 ATP4AP20648 1035 aa5.91□□□□□ -1.46
SHMT1-211ENST00000618902 PDCP20941 246 aa5.91□□□□□ -1.46
SHMT1-211ENST00000618902 HOXC8P31273 242 aa5.91□□□□□ -1.46
SHMT1-211ENST00000618902 PSEN2P49810 448 aa5.91□□□□□ -1.46
SHMT1-211ENST00000618902 FXR1P51114 621 aaKnown RBP eCLIP5.91□□□□□ -1.46
SHMT1-211ENST00000618902 ACTR2P61160 394 aa5.91□□□□□ -1.46
SHMT1-211ENST00000618902 ZNF200P98182 395 aaPredicted RBP5.91□□□□□ -1.46
SHMT1-211ENST00000618902 CDC42EP1Q00587 391 aa5.91□□□□□ -1.46
SHMT1-211ENST00000618902 PTK7Q13308 1070 aa5.91□□□□□ -1.46
SHMT1-211ENST00000618902 SAFBQ15424 915 aaKnown RBP eCLIP5.91□□□□□ -1.46
SHMT1-211ENST00000618902 UGCGQ16739 394 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms