RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 MTMR6Q9Y217 621 aa12.35□□□□□ -0.43
PCDHA4-204ENST00000618834 RNF103-CHMP3A0A140T963 221 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 ZNF233A6NK53 670 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 PJA2O43164 708 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 SLFNL1Q499Z3 407 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 TTLL7Q6ZT98 887 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 VSTM4Q8IW00 320 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 BTBD6Q96KE9 485 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 CLIC6Q96NY7 704 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 C14orf93Q9H972 538 aaKnown RBP12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 CALN1Q9BXU9 219 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 GFPT2O94808 682 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 EIF4A3P38919 411 aaKnown RBP12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 FLCNQ8NFG4 579 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 FRMPD2Q68DX3 1309 aaPredicted RBP12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 COL17A1Q9UMD9 1497 aaPredicted RBP12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 LRRIQ4A6NIV6 560 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 KITP10721 976 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 FBLN1P23142 703 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 CHRNA2Q15822 529 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 NSMFQ6X4W1 530 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 CPXCR1Q8N123 301 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 PLBD2Q8NHP8 589 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 SNX25Q9H3E2 840 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 MAN2A1Q16706 1144 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 GPKOWQ92917 476 aaPredicted RBP eCLIP12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 SESN1Q9Y6P5 492 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 H0YC42 278 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 ARL4AP40617 200 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 IL2RBP14784 551 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 PSMC2P35998 433 aaKnown RBP12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 CAV1Q03135 178 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 EHD2Q9NZN4 543 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 KDM5DQ9BY66 1539 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 TESPA1A2RU30 521 aaPredicted RBP12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 COBLO75128 1261 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 SLC30A9Q6PML9 568 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 PLEKHM3Q6ZWE6 761 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 BZW1Q7L1Q6 419 aaKnown RBP12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 SUPT3HO75486 399 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 ZBED1O96006 694 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 ARL4CP56559 192 aa12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 MTHFSDQ2M296 383 aaKnown RBP12.34□□□□□ -0.43
PCDHA4-204ENST00000618834 FANCAO15360 1455 aa12.33□□□□□ -0.43
PCDHA4-204ENST00000618834 FGGP02679 453 aa12.33□□□□□ -0.43
PCDHA4-204ENST00000618834 SOX5P35711 763 aa12.33□□□□□ -0.43
PCDHA4-204ENST00000618834 MAGOHP61326 146 aaKnown RBP12.33□□□□□ -0.43
PCDHA4-204ENST00000618834 PPP2R2AP63151 447 aa12.33□□□□□ -0.43
PCDHA4-204ENST00000618834 THOC1Q96FV9 657 aaKnown RBP12.33□□□□□ -0.43
PCDHA4-204ENST00000618834 MYH15Q9Y2K3 1946 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 POLR2MP0CAP2 368 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 VCAM1P19320 739 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 BBS9Q3SYG4 887 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 C11orf57Q6ZUT1 292 aaPredicted RBP12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 TTC17Q96AE7 1141 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 ASCC2Q9H1I8 757 aaPredicted RBP12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 GID8Q9NWU2 228 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 PPARGP37231 505 aaPredicted RBP12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 DPCR1Q3MIW9 517 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 ODR4Q5SWX8 454 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 PPP4R4Q6NUP7 873 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 DNMT1P26358 1616 aaKnown RBP12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 FAM26FQ5R3K3 315 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 RSRC2Q7L4I2 434 aaKnown RBP12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 FAM161BQ96MY7 647 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 DBNDD2Q9BQY9 259 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 DIS3Q9Y2L1 958 aaKnown RBP12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 GMNCA6NCL1 334 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 TJP3O95049 919 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 NDUFA10O95299 355 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 C10orf88Q9H8K7 445 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 SLC12A6Q9UHW9 1150 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 SMARCA1P28370 1054 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 AARSP49588 968 aaKnown RBP eCLIP12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 ZNF555Q8NEP9 628 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 POLR3EQ9NVU0 708 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 PKD2L2Q9NZM6 624 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 SRGAP2CP0DJJ0 459 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 ABCD1P33897 745 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 WDR75Q8IWA0 830 aaKnown RBP12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 SAYSD1Q9NPB0 183 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 TIMM10P62072 90 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 OLFML2BQ68BL8 750 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 NLRP14Q86W24 1093 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 DCAF5Q96JK2 942 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 THAP9Q9H5L6 903 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 MICAL3Q7RTP6 2002 aa12.33□□□□□ -0.44
PCDHA4-204ENST00000618834 MYL1P05976 194 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 PATL1Q86TB9 770 aaKnown RBP12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 ADNPQ9H2P0 1102 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 C19orf44Q9H6X5 657 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 KIAA1024Q9UPX6 916 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 LPIN2Q92539 896 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 GTSE1Q9NYZ3 720 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 P2RX5Q93086 422 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 ZNF594Q96JF6 807 aaPredicted RBP12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 CD109Q6YHK3 1445 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 CUL3Q13618 768 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 ZNF658Q5TYW1 1059 aaPredicted RBP12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 FAM160B1Q5W0V3 765 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms