RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 ANKRD54Q6NXT1 300 aa9.04□□□□□ -0.96
CBWD1-227ENST00000618361 MFSD6Q6ZSS7 791 aa9.04□□□□□ -0.96
CBWD1-227ENST00000618361 PNMA1Q8ND90 353 aa9.04□□□□□ -0.96
CBWD1-227ENST00000618361 VN1R2Q8NFZ6 395 aa9.04□□□□□ -0.96
CBWD1-227ENST00000618361 ESR2Q92731 530 aa9.04□□□□□ -0.96
CBWD1-227ENST00000618361 CPVLQ9H3G5 476 aa9.04□□□□□ -0.96
CBWD1-227ENST00000618361 RNF41Q9H4P4 317 aaPredicted RBP9.04□□□□□ -0.96
CBWD1-227ENST00000618361 JMJD4Q9H9V9 463 aa9.04□□□□□ -0.96
CBWD1-227ENST00000618361 AAASQ9NRG9 546 aa9.04□□□□□ -0.96
CBWD1-227ENST00000618361 PCDHB12Q9Y5F1 795 aa9.04□□□□□ -0.96
CBWD1-227ENST00000618361 KIAA1217Q5T5P2 1943 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 MYO7AQ13402 2215 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 MED19A0JLT2 244 aaPredicted RBP9.03□□□□□ -0.96
CBWD1-227ENST00000618361 MBLAC1A4D2B0 266 aaPredicted RBP9.03□□□□□ -0.96
CBWD1-227ENST00000618361 SPATA31C2B4DYI2 1134 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 FSCN2O14926 492 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 PER2O15055 1255 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 FIBPO43427 364 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 SORBS3O60504 671 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 SYCE2Q6PIF2 218 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 RTN4RL1Q86UN2 441 aaPredicted RBP9.03□□□□□ -0.96
CBWD1-227ENST00000618361 IQCA1Q86XH1 822 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 MIER1Q8N108 512 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 LINC01599Q8WXQ3 324 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 MTMR8Q96EF0 704 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 NECTIN4Q96NY8 510 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 INPP4AQ96PE3 977 aaPredicted RBP9.03□□□□□ -0.96
CBWD1-227ENST00000618361 SENP7Q9BQF6 1050 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 KAT14Q9H8E8 782 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 LZTS1Q9Y250 596 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 CDY2AQ9Y6F7 541 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 ATG2AQ2TAZ0 1938 aa9.03□□□□□ -0.96
CBWD1-227ENST00000618361 CACNA1BQ00975 2339 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 GCOM1H8Y6P7 765 aaPredicted RBP9.02□□□□□ -0.97
CBWD1-227ENST00000618361 DHX16O60231 1041 aaKnown RBP9.02□□□□□ -0.97
CBWD1-227ENST00000618361 FGF18O76093 207 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 BRD1O95696 1058 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 LMNAP02545 664 aaKnown RBP9.02□□□□□ -0.97
CBWD1-227ENST00000618361 PARP1P09874 1014 aaKnown RBP9.02□□□□□ -0.97
CBWD1-227ENST00000618361 POLR2MP0CAP2 368 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 SCG2P13521 617 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 MRPS6P82932 125 aaKnown RBP9.02□□□□□ -0.97
CBWD1-227ENST00000618361 ITIH3Q06033 890 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 MCMDC2Q4G0Z9 681 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 TPRNQ4KMQ1 711 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 IER5Q5VY09 327 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 RUFY4Q6ZNE9 571 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 CYFIP1Q7L576 1253 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 ZDHHC14Q8IZN3 488 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 GIMAP8Q8ND71 665 aaPredicted RBP9.02□□□□□ -0.97
CBWD1-227ENST00000618361 IL31RAQ8NI17 732 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 GPKOWQ92917 476 aaPredicted RBP eCLIP9.02□□□□□ -0.97
CBWD1-227ENST00000618361 EVI5LQ96CN4 794 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 RMDN1Q96DB5 314 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 AGO3Q9H9G7 860 aaKnown RBP9.02□□□□□ -0.97
CBWD1-227ENST00000618361 SSUH2Q9Y2M2 353 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 PCDHGC5Q9Y5F6 944 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 FRMPD4Q14CM0 1322 aa9.02□□□□□ -0.97
CBWD1-227ENST00000618361 ZBTB5O15062 677 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 PPFIA3O75145 1194 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 SDHBP21912 280 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 HOXA13P31271 388 aaPredicted RBP9.01□□□□□ -0.97
CBWD1-227ENST00000618361 CD52P31358 61 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 TECP42680 631 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 SARSP49591 514 aaKnown RBP9.01□□□□□ -0.97
CBWD1-227ENST00000618361 TTC3P53804 2025 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 ERVFC1P60507 584 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 PLCB3Q01970 1234 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 PPFIA1Q13136 1202 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 PAN2Q504Q3 1202 aaKnown RBP9.01□□□□□ -0.97
CBWD1-227ENST00000618361 UTP14CQ5TAP6 766 aaKnown RBP9.01□□□□□ -0.97
CBWD1-227ENST00000618361 CES5AQ6NT32 575 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 XRRA1Q6P2D8 792 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 TRIM50Q86XT4 487 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 PLCD3Q8N3E9 789 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 DNAJB3Q8WWF6 145 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 CASP10Q92851 521 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 TNPO1Q92973 898 aaKnown RBP9.01□□□□□ -0.97
CBWD1-227ENST00000618361 CNTNAP3BQ96NU0 1288 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 CNTNAP3Q9BZ76 1288 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 ADAM7Q9H2U9 754 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 BCAS3Q9H6U6 928 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 VAT1LQ9HCJ6 419 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 NGRNQ9NPE2 291 aaKnown RBP9.01□□□□□ -0.97
CBWD1-227ENST00000618361 TSHZ2Q9NRE2 1034 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 ERAP1Q9NZ08 941 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 PUF60Q9UHX1 559 aaKnown RBP9.01□□□□□ -0.97
CBWD1-227ENST00000618361 TUBE1Q9UJT0 475 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 LRFN2Q9ULH4 789 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 USTQ9Y2C2 406 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 PCDHA1Q9Y5I3 950 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 CACNA1GO43497 2377 aa9.01□□□□□ -0.97
CBWD1-227ENST00000618361 MYO15AQ9UKN7 3530 aa9□□□□□ -0.97
CBWD1-227ENST00000618361 RRN3P2A6NIE6 340 aa9□□□□□ -0.97
CBWD1-227ENST00000618361 TRIM6-TRIM34B2RNG4 842 aa9□□□□□ -0.97
CBWD1-227ENST00000618361 C2CD4DB7Z1M9 353 aa9□□□□□ -0.97
CBWD1-227ENST00000618361 M0QZ92 97 aa9□□□□□ -0.97
CBWD1-227ENST00000618361 PPP1R11O60927 126 aaPredicted RBP9□□□□□ -0.97
CBWD1-227ENST00000618361 AOC1P19801 751 aa9□□□□□ -0.97
CBWD1-227ENST00000618361 MRPS9P82933 396 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms