RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 IDI2Q9BXS1 227 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 TRIM9Q9C026 710 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 COPB2P35606 906 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 YARSP54577 528 aaKnown RBP15.15■□□□□ 0.02
CIITA-213ENST00000618327 SCYL3Q8IZE3 742 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 CEP63Q96MT8 703 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 SAR1BQ9Y6B6 198 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 K7ERI5 159 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 PDE6CP51160 858 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 PSMC5P62195 406 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 KCNB1Q14721 858 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 FAM83AQ86UY5 434 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 DHX40Q8IX18 779 aaKnown RBP15.15■□□□□ 0.02
CIITA-213ENST00000618327 GUF1Q8N442 669 aaKnown RBP15.15■□□□□ 0.02
CIITA-213ENST00000618327 KIAA1524Q8TCG1 905 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 GABBR1Q9UBS5 961 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 FCER1AP12319 257 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 PIK3CAP42336 1068 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 PPP1R7Q15435 360 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 C8orf74Q6P047 294 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 NBPF11Q86T75 865 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 FBXO28Q9NVF7 368 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 RGL1Q9NZL6 768 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 GCNT4Q9P109 453 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 FERP16591 822 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 MFAP3P55082 362 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 PTPAQ15257 358 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 SPDYE2Q495Y8 402 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 C6orf163Q5TEZ5 329 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 SWSAP1Q6NVH7 229 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 CD2APQ9Y5K6 639 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 GRIN1Q05586 938 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 PPP1R13BQ96KQ4 1090 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 FAM167AQ96KS9 214 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 MMP19Q99542 508 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 ATP6V0A4Q9HBG4 840 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 RHBDL3P58872 404 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 AGBL1Q96MI9 1066 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 OGFRQ9NZT2 677 aa15.14■□□□□ 0.01
CIITA-213ENST00000618327 SRGAP2CP0DJJ0 459 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 PKN1Q16512 942 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 CFAP221Q4G0U5 840 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 ANKRD13CQ8N6S4 541 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 ZKSCAN4Q969J2 545 aaPredicted RBP15.13■□□□□ 0.01
CIITA-213ENST00000618327 TMX2Q9Y320 296 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 PCDHA10Q9Y5I2 948 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 OPA1O60313 960 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 MXI1P50539 228 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 SMAP1Q8IYB5 467 aaPredicted RBP15.13■□□□□ 0.01
CIITA-213ENST00000618327 ENGASEQ8NFI3 743 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 GMCL1Q96IK5 515 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 TUFT1Q9NNX1 390 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 SEL1LQ9UBV2 794 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 LGALS16A8MUM7 142 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 BUB1O43683 1085 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 EYA4O95677 639 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 C10orf67Q8IYJ2 551 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 CERS5Q8N5B7 392 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 CCDC155Q8N6L0 562 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 RNF169Q8NCN4 708 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 CCDC114Q96M63 670 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 PANX2Q96RD6 677 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 MAK16Q9BXY0 300 aaKnown RBP15.13■□□□□ 0.01
CIITA-213ENST00000618327 TUBE1Q9UJT0 475 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 USTQ9Y2C2 406 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 KNOP1Q1ED39 458 aaKnown RBP15.13■□□□□ 0.01
CIITA-213ENST00000618327 TKFCQ3LXA3 575 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 OTUD6BQ8N6M0 293 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 ATG4CQ96DT6 458 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 RIOX1Q9H6W3 641 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 ZNF302Q9NR11 478 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 AMFRQ9UKV5 643 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 AGTPBP1Q9UPW5 1226 aa15.13■□□□□ 0.01
CIITA-213ENST00000618327 KCPQ6ZWJ8 1503 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 NR3C1P04150 777 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 DPYDQ12882 1025 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 CALCOCO2Q13137 446 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 DAAM2Q86T65 1068 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 CEP57Q86XR8 500 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 GMCL1P1Q8NEA9 526 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 MMS19Q96T76 1030 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 NBPF3Q9H094 633 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 BCL9LQ86UU0 1499 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 WNT10BO00744 389 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 ATP2A1O14983 1001 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 TOB1P50616 345 aaPredicted RBP15.12■□□□□ 0.01
CIITA-213ENST00000618327 TTLL4Q14679 1199 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 NAALADL2Q58DX5 795 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 MRIQ9BWK5 157 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 GOLGA8IPA6NC78 632 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 GOLGA8JA6NMD2 632 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 NR3C2P08235 984 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 PTK2Q05397 1052 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 ELF2Q15723 593 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 CCDC6Q16204 474 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 ANKS1AQ92625 1134 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 IL17RAQ96F46 866 aa15.12■□□□□ 0.01
CIITA-213ENST00000618327 FAM217BQ9NTX9 383 aaPredicted RBP15.12■□□□□ 0.01
CIITA-213ENST00000618327 MTRF1LQ9UGC7 380 aaKnown RBP15.12■□□□□ 0.01
CIITA-213ENST00000618327 SOWAHDA6NJG2 315 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms