RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 INF2Q27J81 1249 aa28.21■■■□□ 2.11
PMS1-220ENST00000618056 OXER1Q8TDS5 423 aa28.21■■■□□ 2.11
PMS1-220ENST00000618056 TBC1D32Q96NH3 1257 aa28.21■■■□□ 2.11
PMS1-220ENST00000618056 PPFIA1Q13136 1202 aa28.2■■■□□ 2.1
PMS1-220ENST00000618056 TRAF7Q6Q0C0 670 aa28.2■■■□□ 2.1
PMS1-220ENST00000618056 DEFB128Q7Z7B8 93 aa28.2■■■□□ 2.1
PMS1-220ENST00000618056 SMAP1Q8IYB5 467 aaPredicted RBP28.2■■■□□ 2.1
PMS1-220ENST00000618056 TNPO1Q92973 898 aaKnown RBP28.2■■■□□ 2.1
PMS1-220ENST00000618056 UIMC1Q96RL1 719 aa28.2■■■□□ 2.1
PMS1-220ENST00000618056 RIT2Q99578 217 aa28.2■■■□□ 2.1
PMS1-220ENST00000618056 BRMS1Q9HCU9 246 aa28.2■■■□□ 2.1
PMS1-220ENST00000618056 CAND2O75155 1236 aa28.19■■■□□ 2.1
PMS1-220ENST00000618056 TDP2O95551 362 aa28.19■■■□□ 2.1
PMS1-220ENST00000618056 ZNF618Q5T7W0 954 aa28.19■■■□□ 2.1
PMS1-220ENST00000618056 SLC5A5Q92911 643 aa28.19■■■□□ 2.1
PMS1-220ENST00000618056 GBF1Q92538 1859 aa28.18■■■□□ 2.1
PMS1-220ENST00000618056 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.18■■■□□ 2.1
PMS1-220ENST00000618056 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.18■■■□□ 2.1
PMS1-220ENST00000618056 ST18O60284 1047 aa28.18■■■□□ 2.1
PMS1-220ENST00000618056 KRT2P35908 639 aa28.18■■■□□ 2.1
PMS1-220ENST00000618056 GPNMBQ14956 572 aa28.18■■■□□ 2.1
PMS1-220ENST00000618056 GRIK4Q16099 956 aa28.18■■■□□ 2.1
PMS1-220ENST00000618056 MIS18BP1Q6P0N0 1132 aa28.18■■■□□ 2.1
PMS1-220ENST00000618056 OTOP2Q7RTS6 562 aa28.18■■■□□ 2.1
PMS1-220ENST00000618056 NEK8Q86SG6 692 aa28.18■■■□□ 2.1
PMS1-220ENST00000618056 TNFRSF25Q93038 417 aa28.18■■■□□ 2.1
PMS1-220ENST00000618056 CXXC1Q9P0U4 656 aaPredicted RBP28.18■■■□□ 2.1
PMS1-220ENST00000618056 TCEAL9Q9UHQ7 104 aa28.18■■■□□ 2.1
PMS1-220ENST00000618056 MBLAC1A4D2B0 266 aaPredicted RBP28.17■■■□□ 2.1
PMS1-220ENST00000618056 CXCL10P02778 98 aa28.17■■■□□ 2.1
PMS1-220ENST00000618056 MMP1P03956 469 aa28.17■■■□□ 2.1
PMS1-220ENST00000618056 PLCB4Q15147 1175 aa28.17■■■□□ 2.1
PMS1-220ENST00000618056 FAM160B1Q5W0V3 765 aa28.17■■■□□ 2.1
PMS1-220ENST00000618056 FAM109BQ6ICB4 259 aaPredicted RBP28.17■■■□□ 2.1
PMS1-220ENST00000618056 CCDC60Q8IWA6 550 aaPredicted RBP28.17■■■□□ 2.1
PMS1-220ENST00000618056 PCDHA10Q9Y5I2 948 aa28.17■■■□□ 2.1
PMS1-220ENST00000618056 EVPLQ92817 2033 aa28.17■■■□□ 2.1
PMS1-220ENST00000618056 MYO9BQ13459 2157 aa28.16■■■□□ 2.1
PMS1-220ENST00000618056 RRN3P2A6NIE6 340 aa28.16■■■□□ 2.1
PMS1-220ENST00000618056 BACH1O14867 736 aa28.16■■■□□ 2.1
PMS1-220ENST00000618056 THPOP40225 353 aa28.16■■■□□ 2.1
PMS1-220ENST00000618056 TRIM29Q14134 588 aa28.16■■■□□ 2.1
PMS1-220ENST00000618056 PPP4R3AQ6IN85 833 aa28.16■■■□□ 2.1
PMS1-220ENST00000618056 PIK3AP1Q6ZUJ8 805 aa28.16■■■□□ 2.1
PMS1-220ENST00000618056 CDH23Q9H251 3354 aa28.16■■■□□ 2.1
PMS1-220ENST00000618056 GAS7O60861 476 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 ACTN1P12814 892 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 INSRRP14616 1297 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 GCFC2P16383 781 aaKnown RBP28.15■■■□□ 2.1
PMS1-220ENST00000618056 HMGN5P82970 282 aaKnown RBP28.15■■■□□ 2.1
PMS1-220ENST00000618056 NR5A1Q13285 461 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 MARCH8Q5T0T0 291 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 LRCH2Q5VUJ6 765 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 KRT40Q6A162 431 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 TAF2Q6P1X5 1199 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 RPAINQ86UA6 219 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 ETNPPLQ8TBG4 499 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 ZNF302Q9NR11 478 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 DDX25Q9UHL0 483 aaKnown RBP28.15■■■□□ 2.1
PMS1-220ENST00000618056 TUBE1Q9UJT0 475 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 TRPC6Q9Y210 931 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 POTEB3A0JP26 581 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 NBNO60934 754 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 PSAPP07602 524 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 MBTPS1Q14703 1052 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 LETM2Q2VYF4 491 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 EARS2Q5JPH6 523 aaKnown RBP28.15■■■□□ 2.1
PMS1-220ENST00000618056 SWSAP1Q6NVH7 229 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 POTEBQ6S5H4 581 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 NAP1L4Q99733 375 aaKnown RBP28.15■■■□□ 2.1
PMS1-220ENST00000618056 TEKT3Q9BXF9 490 aa28.15■■■□□ 2.1
PMS1-220ENST00000618056 FTOQ9C0B1 505 aaKnown RBP eCLIP28.15■■■□□ 2.1
PMS1-220ENST00000618056 MAFBQ9Y5Q3 323 aaPredicted RBP28.15■■■□□ 2.1
PMS1-220ENST00000618056 WDR64B1ANS9 1081 aa28.14■■■□□ 2.09
PMS1-220ENST00000618056 RSPH10B2B2RC85 870 aa28.14■■■□□ 2.09
PMS1-220ENST00000618056 PSMD10O75832 226 aa28.14■■■□□ 2.09
PMS1-220ENST00000618056 RSPH10BP0C881 870 aa28.14■■■□□ 2.09
PMS1-220ENST00000618056 SIP14410 1827 aa28.14■■■□□ 2.09
PMS1-220ENST00000618056 SFNP31947 248 aa28.13■■■□□ 2.09
PMS1-220ENST00000618056 PDXDC2PQ6P474 469 aa28.13■■■□□ 2.09
PMS1-220ENST00000618056 DIS3L2Q8IYB7 885 aaKnown RBP28.13■■■□□ 2.09
PMS1-220ENST00000618056 ATP8B4Q8TF62 1192 aa28.13■■■□□ 2.09
PMS1-220ENST00000618056 BACH2Q9BYV9 841 aa28.13■■■□□ 2.09
PMS1-220ENST00000618056 SAMM50Q9Y512 469 aa28.13■■■□□ 2.09
PMS1-220ENST00000618056 SLC4A7Q9Y6M7 1214 aa28.13■■■□□ 2.09
PMS1-220ENST00000618056 MICAL3Q7RTP6 2002 aa28.13■■■□□ 2.09
PMS1-220ENST00000618056 LOXHD1Q8IVV2 1947 aa28.12■■■□□ 2.09
PMS1-220ENST00000618056 CHD9Q3L8U1 2897 aa28.12■■■□□ 2.09
PMS1-220ENST00000618056 BTBD18B2RXH4 712 aa28.12■■■□□ 2.09
PMS1-220ENST00000618056 SLC37A4O43826 429 aa28.12■■■□□ 2.09
PMS1-220ENST00000618056 HBP1O60381 514 aa28.12■■■□□ 2.09
PMS1-220ENST00000618056 BAIAP3O94812 1187 aa28.12■■■□□ 2.09
PMS1-220ENST00000618056 B3GNT9Q6UX72 402 aa28.12■■■□□ 2.09
PMS1-220ENST00000618056 DEFB123Q8N688 67 aa28.12■■■□□ 2.09
PMS1-220ENST00000618056 RDM1Q8NG50 284 aa28.12■■■□□ 2.09
PMS1-220ENST00000618056 DISC1Q9NRI5 854 aa28.12■■■□□ 2.09
PMS1-220ENST00000618056 PTPRSQ13332 1948 aa28.12■■■□□ 2.09
PMS1-220ENST00000618056 IGSF9BQ9UPX0 1349 aa28.11■■■□□ 2.09
PMS1-220ENST00000618056 FAM205CA6NFA0 338 aa28.11■■■□□ 2.09
PMS1-220ENST00000618056 RPLP2P05387 115 aaKnown RBP28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms