RNA–Protein interactions for RNA: ENST00000616577.4

TPT1-214, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3 BASIC

Gene TPT1, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-214ENST00000616577 A0A0G2JLW4 131 aa11.32□□□□□ -0.6
TPT1-214ENST00000616577 KRT1P04264 644 aa11.32□□□□□ -0.6
TPT1-214ENST00000616577 EIF3BP55884 814 aaKnown RBP11.32□□□□□ -0.6
TPT1-214ENST00000616577 HAUS1Q96CS2 278 aa11.32□□□□□ -0.6
TPT1-214ENST00000616577 HOOK2Q96ED9 719 aa11.32□□□□□ -0.6
TPT1-214ENST00000616577 A2ML1A8K2U0 1454 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 EXOC1LA0A1B0GW35 172 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 ATP2C1P98194 919 aaPredicted RBP11.31□□□□□ -0.6
TPT1-214ENST00000616577 GLE1Q53GS7 698 aaKnown RBP11.31□□□□□ -0.6
TPT1-214ENST00000616577 SLC7A3Q8WY07 619 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 THOC1Q96FV9 657 aaKnown RBP11.31□□□□□ -0.6
TPT1-214ENST00000616577 NPHP4O75161 1426 aaPredicted RBP11.31□□□□□ -0.6
TPT1-214ENST00000616577 MADDQ8WXG6 1647 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 POTEB3A0JP26 581 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 LRRD1A4D1F6 860 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 POTECB2RU33 542 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 CAPN9O14815 690 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 FXR1P51114 621 aaKnown RBP eCLIP11.31□□□□□ -0.6
TPT1-214ENST00000616577 STAT2P52630 851 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 RCAN1P53805 252 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 IGBP1P78318 339 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 PDE1BQ01064 536 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 SEPT6Q14141 434 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 BRDTQ58F21 947 aaPredicted RBP11.31□□□□□ -0.6
TPT1-214ENST00000616577 POTEBQ6S5H4 581 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 PVALEFA0A1B0GWK0 134 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 CA4P22748 312 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 BASP1P80723 227 aaKnown RBP11.31□□□□□ -0.6
TPT1-214ENST00000616577 COASYQ13057 564 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 ZNF211Q13398 564 aaPredicted RBP11.31□□□□□ -0.6
TPT1-214ENST00000616577 CC2D2BQ6DHV5 1058 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 NME8Q8N427 588 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 HPS3Q969F9 1004 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 TRIM11Q96F44 468 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 CFAP57Q96MR6 1250 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 MTA3Q9BTC8 594 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 ACTR5Q9H9F9 607 aaPredicted RBP11.31□□□□□ -0.6
TPT1-214ENST00000616577 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.31□□□□□ -0.6
TPT1-214ENST00000616577 PI4KBQ9UBF8 816 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 AFG3L2Q9Y4W6 797 aa11.31□□□□□ -0.6
TPT1-214ENST00000616577 FDPSP14324 419 aaKnown RBP11.3□□□□□ -0.6
TPT1-214ENST00000616577 RASIP1Q5U651 963 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 ZNF449Q6P9G9 518 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 CEP95Q96GE4 821 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 CALN1Q9BXU9 219 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 NXF1Q9UBU9 619 aaKnown RBP11.3□□□□□ -0.6
TPT1-214ENST00000616577 HECW2Q9P2P5 1572 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 CD58P19256 250 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 GRAPQ13588 217 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 BBS9Q3SYG4 887 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 DNAJC24Q6P3W2 148 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 STAG2Q8N3U4 1231 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 GRAPLQ8TC17 118 aaPredicted RBP11.3□□□□□ -0.6
TPT1-214ENST00000616577 COG1Q8WTW3 980 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 FAM196BA6NMK8 535 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 INO80B-WBP1J3KQ70 363 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 TDP2O95551 362 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 NR3C1P04150 777 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 MMEP08473 750 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 MSH2P43246 934 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 RWDD2BP57060 319 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 MAGOHP61326 146 aaKnown RBP11.3□□□□□ -0.6
TPT1-214ENST00000616577 TFAMQ00059 246 aaKnown RBP11.3□□□□□ -0.6
TPT1-214ENST00000616577 MAP7D3Q8IWC1 876 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 PDCD7Q8N8D1 485 aaKnown RBP11.3□□□□□ -0.6
TPT1-214ENST00000616577 ANKRD7Q92527 254 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 RAD54LQ92698 747 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 ADPGKQ9BRR6 497 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 RIOK1Q9BRS2 568 aaKnown RBP11.3□□□□□ -0.6
TPT1-214ENST00000616577 INO80BQ9C086 356 aaPredicted RBP11.3□□□□□ -0.6
TPT1-214ENST00000616577 NRBP2Q9NSY0 501 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 PALLDQ8WX93 1383 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 ARAP3Q8WWN8 1544 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 RNF17Q9BXT8 1623 aaKnown RBP11.3□□□□□ -0.6
TPT1-214ENST00000616577 A0A1B0GTH6 734 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 CTDNEP1O95476 244 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 SERPINB6P35237 376 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 RPS6KA2Q15349 733 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 SH2D4BQ5SQS7 431 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 RHOT2Q8IXI1 618 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 PROM2Q8N271 834 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 NLGN1Q8N2Q7 840 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 SRBD1Q8N5C6 995 aaKnown RBP11.3□□□□□ -0.6
TPT1-214ENST00000616577 SPATA4Q8NEY3 305 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 SCYL1Q96KG9 808 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 AS3MTQ9HBK9 375 aa11.3□□□□□ -0.6
TPT1-214ENST00000616577 TPX2Q9ULW0 747 aaKnown RBP11.3□□□□□ -0.6
TPT1-214ENST00000616577 CFAP74Q9C0B2 1584 aa11.29□□□□□ -0.6
TPT1-214ENST00000616577 SART1O43290 800 aaKnown RBP11.29□□□□□ -0.6
TPT1-214ENST00000616577 EIF2AK2P19525 551 aaKnown RBP11.29□□□□□ -0.6
TPT1-214ENST00000616577 ARHGAP4P98171 946 aa11.29□□□□□ -0.6
TPT1-214ENST00000616577 C6orf118Q5T5N4 469 aa11.29□□□□□ -0.6
TPT1-214ENST00000616577 RAD9BQ6WBX8 426 aa11.29□□□□□ -0.6
TPT1-214ENST00000616577 SENP2Q9HC62 589 aa11.29□□□□□ -0.6
TPT1-214ENST00000616577 MRPL47Q9HD33 250 aaKnown RBP11.29□□□□□ -0.6
TPT1-214ENST00000616577 MLXIPLQ9NP71 852 aa11.29□□□□□ -0.6
TPT1-214ENST00000616577 CDHR2Q9BYE9 1310 aa11.29□□□□□ -0.6
TPT1-214ENST00000616577 ZNF185O15231 689 aa11.29□□□□□ -0.6
TPT1-214ENST00000616577 PEX3P56589 373 aa11.29□□□□□ -0.6
TPT1-214ENST00000616577 ANTXR2P58335 489 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms