RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 TMEM206Q9H813 350 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 KMT5AQ9NQR1 393 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 KCNQ5Q9NR82 932 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 ABCC6O95255 1503 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 HPDP32754 393 aaPredicted RBP14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 PEX3P56589 373 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 MRPS25P82663 173 aaKnown RBP14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 HDLBPQ00341 1268 aaKnown RBP14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 MDM2Q00987 491 aaPredicted RBP14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 GRB10Q13322 594 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 NT5DC1Q5TFE4 455 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 REXO1L1PQ8IX06 675 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 FAM151AQ8WW52 585 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 KCNG1Q9UIX4 513 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 MRFAP1Q9Y605 127 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 TCHHQ07283 1943 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 TM4SF1P30408 202 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 SHMT1P34896 483 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 GUCY2DQ02846 1103 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 PADI6Q6TGC4 694 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 BBXQ8WY36 941 aaPredicted RBP14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 KRT12Q99456 494 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 TMEM39BQ9GZU3 492 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 RABEP2Q9H5N1 569 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 ZHX2Q9Y6X8 837 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 PARP4Q9UKK3 1724 aaKnown RBP14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 GOLGA8IPA6NC78 632 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 GOLGA8JA6NMD2 632 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 KLK7P49862 253 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 FUT2Q10981 343 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 USTQ9Y2C2 406 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 EIF3CLB5ME19 914 aaKnown RBP14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 LMNB1P20700 586 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 SLC15A2Q16348 729 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 SEPT14Q6ZU15 432 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 ARFGAP2Q8N6H7 521 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 CNKSR2Q8WXI2 1034 aa14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 EIF3CQ99613 913 aaKnown RBP14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 UBE2TQ9NPD8 197 aaPredicted RBP14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 TYW1Q9NV66 732 aaKnown RBP14.39□□□□□ -0.11
PPP4R3B-206ENST00000616407 ATP8B1O43520 1251 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 MAP2K1Q02750 393 aaPredicted RBP14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 SUPT20HL1Q3ZLR7 823 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 LIN9Q5TKA1 542 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 LRRC45Q96CN5 670 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 WRNIP1Q96S55 665 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 DNAI2Q9GZS0 605 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 ABCB6Q9NP58 842 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 RGPD5Q99666 1765 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 WNT7AO00755 349 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 ACER1Q8TDN7 264 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 DCPSQ96C86 337 aaKnown RBP14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 LXNQ9BS40 222 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 TRIM10Q9UDY6 481 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 TADA3O75528 432 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 ACTN2P35609 894 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 ECE1P42892 770 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 EZH2Q15910 746 aaKnown RBP14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 CDKAL1Q5VV42 579 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 MICALCLQ6ZW33 695 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 SH2D3AQ9BRG2 576 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 C1orf112Q9NSG2 853 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 ANKFY1Q9P2R3 1169 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 IVNS1ABPQ9Y6Y0 642 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 EYA4O95677 639 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 CD19P15391 556 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 NMT1P30419 496 aaKnown RBP14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 EEPD1Q7L9B9 569 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 ZFPM1Q8IX07 1006 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 CCDC105Q8IYK2 499 aa14.38□□□□□ -0.11
PPP4R3B-206ENST00000616407 SLURP2P0DP57 97 aa14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 CCND2P30279 289 aa14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 MXI1P50539 228 aa14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 MTERF2Q49AM1 385 aa14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 APOBEC3HQ6NTF7 200 aaKnown RBP14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 C15orf52Q6ZUT6 534 aaKnown RBP14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 REEP2Q9BRK0 252 aa14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 VCPKMTQ9H867 229 aa14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 CTIFO43310 598 aaKnown RBP14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 KRT19P08727 400 aa14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 FGRP09769 529 aa14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 NT5C1BQ96P26 610 aa14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 SELENOSQ9BQE4 189 aa14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 MAP3K9P80192 1104 aa14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 EAPPQ56P03 285 aaPredicted RBP14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 METTL13Q8N6R0 699 aa14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 SLC7A3Q8WY07 619 aa14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 RNF146Q9NTX7 359 aa14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 FBXO28Q9NVF7 368 aa14.37□□□□□ -0.11
PPP4R3B-206ENST00000616407 SLC7A5Q01650 507 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 TTI2Q6NXR4 508 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 ZNF384Q8TF68 577 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 DPH5Q9H2P9 285 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 PRM3Q9NNZ6 103 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 DNAJC12Q9UKB3 198 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 H0YCG3 227 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 EBAG9O00559 213 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 TBX3O15119 743 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 ATP1A1P05023 1023 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms