RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 ADAM21Q9UKJ8 722 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 ZBTB39O15060 712 aa15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 NOL4O94818 638 aa15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 MYBP10242 640 aa15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 CYP2C19P33261 490 aa15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 SLC12A3P55017 1021 aa15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 CTTNQ14247 550 aaKnown RBP15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 RINLQ6ZS11 566 aa15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 TRERF1Q96PN7 1200 aa15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 REEP2Q9BRK0 252 aa15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 FAN1Q9Y2M0 1017 aa15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 PCDHA2Q9Y5H9 948 aa15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 MYBL2P10244 700 aa15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 CDK17Q00537 523 aa15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 CKAP4Q07065 602 aaKnown RBP15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 KCNA1Q09470 495 aa15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 KCNH2Q12809 1159 aa15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 CCDC181Q5TID7 509 aa15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 HAUS3Q68CZ6 603 aa15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 TRMT1LQ7Z2T5 733 aaKnown RBP15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 HDAC7Q8WUI4 952 aa15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 COL11A2P13942 1736 aaPredicted RBP15.29■□□□□ 0.04
CACNA1C-231ENST00000616390 SLX4Q8IY92 1834 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 MSH4O15457 936 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 TLR2O60603 784 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 EIF3JO75822 258 aaKnown RBP15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 GIT2Q14161 759 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 SLC9C1Q4G0N8 1177 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 TATDN1Q6P1N9 297 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 ETNPPLQ8TBG4 499 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 ACER1Q8TDN7 264 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 AKT1S1Q96B36 256 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 BORCS6Q96GS4 357 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 MS4A14Q96JA4 679 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 GBP3Q9H0R5 595 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 KCTD10Q9H3F6 313 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 ADAMTS1Q9UHI8 967 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 SNX12Q9UMY4 172 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 PACSIN2Q9UNF0 486 aaPredicted RBP15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 JRKLQ9Y4A0 524 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 EML1O00423 815 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 CETN3O15182 167 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 SPATA31C1P0DKV0 1188 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 HNRNPH3P31942 346 aaKnown RBP15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 TUBB4BP68371 445 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 HSP90B2PQ58FF3 399 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 HGSNATQ68CP4 663 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 KSR1Q8IVT5 923 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 TPH2Q8IWU9 490 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 ERMNQ8TAM6 284 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 RIN2Q8WYP3 895 aaPredicted RBP15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 ALS2CR12Q96Q35 445 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 PURBQ96QR8 312 aaKnown RBP15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 NAP1L4Q99733 375 aaKnown RBP15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 IDI2Q9BXS1 227 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 EFCC1Q9HA90 598 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 SIPA1L1O43166 1804 aa15.28■□□□□ 0.04
CACNA1C-231ENST00000616390 C21orf2O43822 256 aa15.27■□□□□ 0.04
CACNA1C-231ENST00000616390 GCNT3O95395 438 aa15.27■□□□□ 0.04
CACNA1C-231ENST00000616390 SLC9A1P19634 815 aa15.27■□□□□ 0.04
CACNA1C-231ENST00000616390 SPIRE1Q08AE8 756 aa15.27■□□□□ 0.04
CACNA1C-231ENST00000616390 HYIQ5T013 277 aa15.27■□□□□ 0.04
CACNA1C-231ENST00000616390 TSHZ1Q6ZSZ6 1077 aa15.27■□□□□ 0.04
CACNA1C-231ENST00000616390 MIGA2Q7L4E1 593 aa15.27■□□□□ 0.04
CACNA1C-231ENST00000616390 LRRC1Q9BTT6 524 aa15.27■□□□□ 0.04
CACNA1C-231ENST00000616390 GLT8D2Q9H1C3 349 aa15.27■□□□□ 0.04
CACNA1C-231ENST00000616390 PRR12Q9ULL5 1215 aa15.27■□□□□ 0.04
CACNA1C-231ENST00000616390 PPIP5K2O43314 1243 aa15.27■□□□□ 0.03
CACNA1C-231ENST00000616390 RAD17O75943 681 aa15.27■□□□□ 0.03
CACNA1C-231ENST00000616390 FTCDO95954 541 aa15.27■□□□□ 0.03
CACNA1C-231ENST00000616390 KCTD19Q17RG1 926 aaPredicted RBP15.27■□□□□ 0.03
CACNA1C-231ENST00000616390 KIAA1755Q5JYT7 1200 aa15.27■□□□□ 0.03
CACNA1C-231ENST00000616390 CREG2Q8IUH2 290 aa15.27■□□□□ 0.03
CACNA1C-231ENST00000616390 OSBPL9Q96SU4 736 aa15.27■□□□□ 0.03
CACNA1C-231ENST00000616390 RUSC1Q9BVN2 902 aa15.27■□□□□ 0.03
CACNA1C-231ENST00000616390 PACSIN1Q9BY11 444 aa15.27■□□□□ 0.03
CACNA1C-231ENST00000616390 PKD2L1Q9P0L9 805 aa15.27■□□□□ 0.03
CACNA1C-231ENST00000616390 CEP72Q9P209 647 aa15.27■□□□□ 0.03
CACNA1C-231ENST00000616390 HDAC9Q9UKV0 1011 aa15.27■□□□□ 0.03
CACNA1C-231ENST00000616390 NRXN2Q9P2S2 1712 aa15.27■□□□□ 0.03
CACNA1C-231ENST00000616390 ANO9A1A5B4 782 aa15.26■□□□□ 0.03
CACNA1C-231ENST00000616390 OPLAHO14841 1288 aa15.26■□□□□ 0.03
CACNA1C-231ENST00000616390 KLHL30Q0D2K2 578 aa15.26■□□□□ 0.03
CACNA1C-231ENST00000616390 AP3B2Q13367 1082 aa15.26■□□□□ 0.03
CACNA1C-231ENST00000616390 ZNF662Q6ZS27 426 aa15.26■□□□□ 0.03
CACNA1C-231ENST00000616390 TRIM59Q8IWR1 403 aa15.26■□□□□ 0.03
CACNA1C-231ENST00000616390 LENG9Q96B70 501 aa15.26■□□□□ 0.03
CACNA1C-231ENST00000616390 VEZTQ9HBM0 779 aa15.26■□□□□ 0.03
CACNA1C-231ENST00000616390 PCDHB13Q9Y5F0 798 aa15.26■□□□□ 0.03
CACNA1C-231ENST00000616390 SSR1P43307 286 aaKnown RBP15.26■□□□□ 0.03
CACNA1C-231ENST00000616390 CASP4P49662 377 aa15.26■□□□□ 0.03
CACNA1C-231ENST00000616390 EIF2AK1Q9BQI3 630 aaKnown RBP15.26■□□□□ 0.03
CACNA1C-231ENST00000616390 QSER1Q2KHR3 1735 aa15.26■□□□□ 0.03
CACNA1C-231ENST00000616390 GREB1LQ9C091 1923 aaPredicted RBP15.26■□□□□ 0.03
CACNA1C-231ENST00000616390 CYP3A7-CYP3A51PA0A087WV96 503 aa15.25■□□□□ 0.03
CACNA1C-231ENST00000616390 A0A087X0T9 212 aa15.25■□□□□ 0.03
CACNA1C-231ENST00000616390 FAM228BP0C875 321 aa15.25■□□□□ 0.03
CACNA1C-231ENST00000616390 CYP3A7P24462 503 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms