RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 ARPP21Q9UBL0 812 aaPredicted RBP13.57□□□□□ -0.24
TCF4-248ENST00000616053 BAIAP2L1Q9UHR4 511 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 SH3BP1Q9Y3L3 701 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 IQCA1LA6NCM1 817 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 KCNK3O14649 394 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 CD58P19256 250 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 CTDSPL2Q05D32 466 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 ARHGEF7Q14155 803 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 ARSJQ5FYB0 599 aaPredicted RBP13.57□□□□□ -0.24
TCF4-248ENST00000616053 INTS4Q96HW7 963 aaKnown RBP13.57□□□□□ -0.24
TCF4-248ENST00000616053 AIPL1Q9NZN9 384 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 RRP9O43818 475 aaKnown RBP13.56□□□□□ -0.24
TCF4-248ENST00000616053 ZNF568Q3ZCX4 644 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 CIAPIN1Q6FI81 312 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 PACSIN2Q9UNF0 486 aaPredicted RBP13.56□□□□□ -0.24
TCF4-248ENST00000616053 UBA6A0AVT1 1052 aaPredicted RBP13.56□□□□□ -0.24
TCF4-248ENST00000616053 FAM47DPA6NHR8 397 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 LRRC14BA6NHZ5 514 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 INPP5BP32019 993 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 STAG1Q8WVM7 1258 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 TNNQ9UQP3 1299 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 KRT14P02533 472 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 RPS8P62241 208 aaKnown RBP13.56□□□□□ -0.24
TCF4-248ENST00000616053 BRINP3Q76B58 766 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 CUX1P39880 1505 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 HPGDP15428 266 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 TECP42680 631 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 ADKP55263 362 aaKnown RBP13.56□□□□□ -0.24
TCF4-248ENST00000616053 DNAJC24Q6P3W2 148 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 PLEKHA8Q96JA3 519 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 CYP4A11Q02928 519 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 ARL8AQ96BM9 186 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 RMDN1Q96DB5 314 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 FAM167BQ9BTA0 163 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 DDX41Q9UJV9 622 aaKnown RBP13.56□□□□□ -0.24
TCF4-248ENST00000616053 ERVK-10P10266 1014 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 PDIA3P30101 505 aaKnown RBP13.56□□□□□ -0.24
TCF4-248ENST00000616053 CTNNA1P35221 906 aaKnown RBP13.56□□□□□ -0.24
TCF4-248ENST00000616053 KRT20P35900 424 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 RFX3P48380 749 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 TBL3Q12788 808 aaKnown RBP13.56□□□□□ -0.24
TCF4-248ENST00000616053 ZC3H7BQ9UGR2 993 aaKnown RBP13.56□□□□□ -0.24
TCF4-248ENST00000616053 IPPQ9Y573 584 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 MSH2P43246 934 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 DNM1Q05193 864 aaKnown RBP13.56□□□□□ -0.24
TCF4-248ENST00000616053 FAM196AQ6ZSG2 479 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 NBPF15Q8N660 670 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 RABGGTAQ92696 567 aa13.56□□□□□ -0.24
TCF4-248ENST00000616053 NCKAP1LP55160 1127 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 SURF1Q15526 300 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 KLC2Q9H0B6 622 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 A6NNZ2 444 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 SCNN1BP51168 640 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 TUBB8Q3ZCM7 444 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 RINLQ6ZS11 566 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 MYLK2Q9H1R3 596 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 PARVGQ9HBI0 331 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 SPACA6W5XKT8 324 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 A0A1B0GW55 424 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 PSAPP07602 524 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 DUX4L2P0CJ85 424 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 DUX4L3P0CJ86 424 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 DUX4L4P0CJ87 422 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 DUX4L5P0CJ88 424 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 DUX4L6P0CJ89 424 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 DUX4L7P0CJ90 424 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 MIIPQ5JXC2 388 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 TCP11Q8WWU5 503 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 TRIM11Q96F44 468 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 ING2Q9H160 280 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 TAB2Q9NYJ8 693 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 KLHL8Q9P2G9 620 aaPredicted RBP13.55□□□□□ -0.24
TCF4-248ENST00000616053 DUX4Q9UBX2 424 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 NDUFB9Q9Y6M9 179 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 PEX1O43933 1283 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 NOLC1Q14978 699 aaKnown RBP eCLIP13.55□□□□□ -0.24
TCF4-248ENST00000616053 LPIN2Q92539 896 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 CCDC78A2IDD5 438 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 KRT1P04264 644 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 KRT4P19013 534 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 ZNF394Q53GI3 561 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 RASIP1Q5U651 963 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 FGD2Q7Z6J4 655 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.55□□□□□ -0.24
TCF4-248ENST00000616053 KCNH3Q9ULD8 1083 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 GTF2E2P29084 291 aaKnown RBP13.55□□□□□ -0.24
TCF4-248ENST00000616053 POMGNT2Q8NAT1 580 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 AAASQ9NRG9 546 aa13.55□□□□□ -0.24
TCF4-248ENST00000616053 AP1B1Q10567 949 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 RAPGEF5Q92565 580 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 PCDHA5Q9Y5H7 936 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 hCG_1642624A0A1W2PR95 340 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 ENC1O14682 589 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 LINS1Q8NG48 757 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 DEPDC7Q96QD5 511 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 NCOA2Q15596 1464 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 TARSL2A2RTX5 802 aaKnown RBP13.54□□□□□ -0.24
TCF4-248ENST00000616053 RASSF10A6NK89 507 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 SLFN14P0C7P3 912 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 NOL9Q5SY16 702 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms