RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 CCT8L2Q96SF2 557 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 IRX1P78414 480 aaPredicted RBP20.3■□□□□ 0.84
SPAST-203ENST00000615843 TGS1Q96RS0 853 aaKnown RBP20.3■□□□□ 0.84
SPAST-203ENST00000615843 PIGSQ96S52 555 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 GINM1Q9NU53 330 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 PARP3Q9Y6F1 533 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 PRAMEF22A3QJZ6 481 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 TMEM191BP0C7N4 346 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 ART3Q13508 389 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 UNC13DQ70J99 1090 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 PDIK1LQ8N165 341 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 SH2D3CQ8N5H7 860 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 ACCSQ96QU6 501 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 ATP10AO60312 1499 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 HNRNPDLO14979 420 aaKnown RBP20.3■□□□□ 0.84
SPAST-203ENST00000615843 PDCD2Q16342 344 aaPredicted RBP20.3■□□□□ 0.84
SPAST-203ENST00000615843 TAF12Q16514 161 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 TTC17Q96AE7 1141 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.3■□□□□ 0.847e-6■□□□□ 9.4
SPAST-203ENST00000615843 PCIF1Q9H4Z3 704 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 BATF3Q9NR55 127 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 MLH3Q9UHC1 1453 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 hCG_1984214I3L0E3 225 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 MEIS1O00470 390 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 BRAFP15056 766 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 CDR2Q01850 454 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 ZNF713Q8N859 430 aaPredicted RBP20.3■□□□□ 0.84
SPAST-203ENST00000615843 FGD4Q96M96 766 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 NUDCD1Q96RS6 583 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 FOXN1O15353 648 aa20.29■□□□□ 0.84
SPAST-203ENST00000615843 EEF1B2P24534 225 aaKnown RBP20.29■□□□□ 0.84
SPAST-203ENST00000615843 PPP1R2P3Q6NXS1 205 aa20.29■□□□□ 0.84
SPAST-203ENST00000615843 RNF207Q6ZRF8 634 aa20.29■□□□□ 0.84
SPAST-203ENST00000615843 CRLF3Q8IUI8 442 aa20.29■□□□□ 0.84
SPAST-203ENST00000615843 ARHGAP18Q8N392 663 aa20.29■□□□□ 0.84
SPAST-203ENST00000615843 CSRNP1Q96S65 589 aa20.29■□□□□ 0.84
SPAST-203ENST00000615843 RIOK1Q9BRS2 568 aaKnown RBP20.29■□□□□ 0.84
SPAST-203ENST00000615843 HESX1Q9UBX0 185 aa20.29■□□□□ 0.84
SPAST-203ENST00000615843 ZBTB12Q9Y330 459 aaPredicted RBP20.29■□□□□ 0.84
SPAST-203ENST00000615843 A6NJR5 290 aa20.29■□□□□ 0.84
SPAST-203ENST00000615843 PLEKHA8P1O95397 391 aa20.29■□□□□ 0.84
SPAST-203ENST00000615843 CNGA1P29973 690 aa20.29■□□□□ 0.84
SPAST-203ENST00000615843 CORO7P57737 925 aa20.29■□□□□ 0.84
SPAST-203ENST00000615843 SLFN13Q68D06 897 aa20.29■□□□□ 0.84
SPAST-203ENST00000615843 HPCAL4Q9UM19 191 aa20.29■□□□□ 0.84
SPAST-203ENST00000615843 NYAP1Q6ZVC0 841 aa20.29■□□□□ 0.84
SPAST-203ENST00000615843 A0A1W2PQC6 194 aa20.29■□□□□ 0.84
SPAST-203ENST00000615843 MXI1P50539 228 aa20.29■□□□□ 0.84
SPAST-203ENST00000615843 FAM81BQ96LP2 452 aa20.29■□□□□ 0.84
SPAST-203ENST00000615843 G3BP2Q9UN86 482 aaKnown RBP20.29■□□□□ 0.84
SPAST-203ENST00000615843 ATP7BP35670 1465 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 ACTN1P12814 892 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 EEF1DP29692 281 aaKnown RBP20.28■□□□□ 0.84
SPAST-203ENST00000615843 MDM2Q00987 491 aaPredicted RBP20.28■□□□□ 0.84
SPAST-203ENST00000615843 LRRC14Q15048 493 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 GPATCH4Q5T3I0 446 aaKnown RBP20.28■□□□□ 0.84
SPAST-203ENST00000615843 RIN2Q8WYP3 895 aaPredicted RBP20.28■□□□□ 0.84
SPAST-203ENST00000615843 AMNQ9BXJ7 453 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 SAMD9Q5K651 1589 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 MAP3K15Q6ZN16 1313 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 C1orf146Q5VVC0 180 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 ZBTB8OSQ8IWT0 167 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 TRIM56Q9BRZ2 755 aaKnown RBP20.28■□□□□ 0.84
SPAST-203ENST00000615843 PICK1Q9NRD5 415 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 GTF2IP78347 998 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 TMPRSS15P98073 1019 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 DNAJC24Q6P3W2 148 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 DARS2Q6PI48 645 aaKnown RBP20.28■□□□□ 0.84
SPAST-203ENST00000615843 SLC17A8Q8NDX2 589 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 SNX12Q9UMY4 172 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 MBD5Q9P267 1494 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 ATP10DQ9P241 1426 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 CCNI2Q6ZMN8 369 aaPredicted RBP20.28■□□□□ 0.84
SPAST-203ENST00000615843 IL17RAQ96F46 866 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 SLITRK6Q9H5Y7 841 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 TMEM206Q9H813 350 aa20.28■□□□□ 0.84
SPAST-203ENST00000615843 DCLK2Q8N568 766 aa20.27■□□□□ 0.84
SPAST-203ENST00000615843 DACT3Q96B18 629 aaPredicted RBP20.27■□□□□ 0.84
SPAST-203ENST00000615843 ANKFY1Q9P2R3 1169 aa20.27■□□□□ 0.84
SPAST-203ENST00000615843 GOLGA8SH3BPF8 625 aa20.27■□□□□ 0.84
SPAST-203ENST00000615843 WDR46O15213 610 aaKnown RBP20.27■□□□□ 0.84
SPAST-203ENST00000615843 CA8P35219 290 aa20.27■□□□□ 0.84
SPAST-203ENST00000615843 FAM83BQ5T0W9 1011 aa20.27■□□□□ 0.84
SPAST-203ENST00000615843 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.27■□□□□ 0.84
SPAST-203ENST00000615843 CFAP36Q96G28 342 aa20.27■□□□□ 0.84
SPAST-203ENST00000615843 ZMAT2Q96NC0 199 aaKnown RBP20.27■□□□□ 0.84
SPAST-203ENST00000615843 PIH1D3Q9NQM4 214 aaKnown RBP20.27■□□□□ 0.84
SPAST-203ENST00000615843 SLC4A7Q9Y6M7 1214 aa20.27■□□□□ 0.84
SPAST-203ENST00000615843 IL1RL1Q01638 556 aa20.27■□□□□ 0.84
SPAST-203ENST00000615843 METTL16Q86W50 562 aaKnown RBP20.27■□□□□ 0.84
SPAST-203ENST00000615843 PROM2Q8N271 834 aa20.27■□□□□ 0.84
SPAST-203ENST00000615843 OLFM3Q96PB7 478 aa20.27■□□□□ 0.84
SPAST-203ENST00000615843 RASGRP2Q7LDG7 609 aa20.27■□□□□ 0.83
SPAST-203ENST00000615843 PCGF5Q86SE9 256 aa20.27■□□□□ 0.83
SPAST-203ENST00000615843 NRBF2Q96F24 287 aa20.27■□□□□ 0.83
SPAST-203ENST00000615843 CAPN11Q9UMQ6 739 aa20.27■□□□□ 0.83
SPAST-203ENST00000615843 CAPN9O14815 690 aa20.26■□□□□ 0.83
SPAST-203ENST00000615843 ICA1Q05084 483 aa20.26■□□□□ 0.83
SPAST-203ENST00000615843 WDR75Q8IWA0 830 aaKnown RBP20.26■□□□□ 0.83
SPAST-203ENST00000615843 OXER1Q8TDS5 423 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms